FFCP PHASE1:Hg19::chr6:75915757..75915775,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1303 | |EntrezGene=1303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2188 | |HGNC=2188 | ||
|TSSclassifier=strong | |||
|UniProt=Q99715 | |UniProt=Q99715 | ||
|association_with_transcript=0bp_to_ENST00000322507_5end | |association_with_transcript=0bp_to_ENST00000322507_5end | ||
|cluster_id=chr6:75915757..75915775,- | |||
|coexpression_cluster_id=C1280 | |coexpression_cluster_id=C1280 | ||
|description=CAGE_peak_1_at_COL12A1_5end | |description=CAGE_peak_1_at_COL12A1_5end | ||
|id=chr6:75915757..75915775,- | |id=chr6:75915757..75915775,- | ||
|ontology_enrichment_celltype=CL:0000055!9.15e-29!180;CL:0000057!1.00e-20!75;CL:0000680!4.81e-10!57;CL:0000056!4.81e-10!57;CL:0000355!4.81e-10!57;CL:0002620!7.09e-10!23;CL:0000187!2.17e-09!54;CL:0000183!6.05e-09!59;CL:0000136!1.12e-08!15;CL:0000393!1.38e-07!60;CL:0000211!1.38e-07!60;CL:0000499!8.33e-07!27 | |ontology_enrichment_celltype=CL:0000055!9.15e-29!180;CL:0000057!1.00e-20!75;CL:0000680!4.81e-10!57;CL:0000056!4.81e-10!57;CL:0000355!4.81e-10!57;CL:0002620!7.09e-10!23;CL:0000187!2.17e-09!54;CL:0000183!6.05e-09!59;CL:0000136!1.12e-08!15;CL:0000393!1.38e-07!60;CL:0000211!1.38e-07!60;CL:0000499!8.33e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.50e-10;23!CL:0000057;1.52e-08;73!CL:0002320;4.74e-08;188!CL:0000134;7.39e-08;55!CL:0000136;1.16e-07;13!CL:0000499;3.77e-07;28!CL:0000723;4.30e-07;61!CL:0000048;5.35e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.17e-21,76;CL:0000680,1.38e-10,58;CL:0000056,1.38e-10,58;CL:0000355,1.38e-10,58;CL:0002620,5.51e-10,23;CL:0000187,6.42e-10,55;CL:0000136,9.00e-09,15;CL:0000393,9.77e-08,61;CL:0000211,9.77e-08,61;CL:0000499,3.45e-07,28;CL:0000192,5.94e-07,43;CL:0000514,5.94e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.19e-19!365;UBERON:0000481!3.25e-15!347;UBERON:0000914!7.78e-15!83;UBERON:0002329!7.78e-15!83;UBERON:0003077!7.78e-15!83;UBERON:0003059!7.78e-15!83;UBERON:0007282!7.78e-15!83;UBERON:0009618!7.78e-15!83;UBERON:0007285!7.78e-15!83;UBERON:0000468!3.66e-14!659;UBERON:0003102!4.27e-14!95;UBERON:0002100!7.42e-14!216;UBERON:0005256!1.62e-13!143;UBERON:0004290!4.82e-12!70;UBERON:0000486!1.41e-11!82;UBERON:0003104!2.06e-11!238;UBERON:0009142!2.06e-11!238;UBERON:0002385!2.72e-11!63;UBERON:0001015!2.72e-11!63;UBERON:0000383!2.72e-11!63;UBERON:0001134!4.73e-11!61;UBERON:0002036!4.73e-11!61;UBERON:0003082!4.73e-11!61;UBERON:0000467!7.86e-10!625;UBERON:0000480!1.35e-09!626;UBERON:0000062!8.12e-09!511;UBERON:0002199!8.19e-09!45;UBERON:0002416!8.19e-09!45;UBERON:0002097!9.16e-08!40;UBERON:0004923!2.96e-07!57;UBERON:0001013!5.90e-07!14 | |ontology_enrichment_uberon=UBERON:0000475!4.19e-19!365;UBERON:0000481!3.25e-15!347;UBERON:0000914!7.78e-15!83;UBERON:0002329!7.78e-15!83;UBERON:0003077!7.78e-15!83;UBERON:0003059!7.78e-15!83;UBERON:0007282!7.78e-15!83;UBERON:0009618!7.78e-15!83;UBERON:0007285!7.78e-15!83;UBERON:0000468!3.66e-14!659;UBERON:0003102!4.27e-14!95;UBERON:0002100!7.42e-14!216;UBERON:0005256!1.62e-13!143;UBERON:0004290!4.82e-12!70;UBERON:0000486!1.41e-11!82;UBERON:0003104!2.06e-11!238;UBERON:0009142!2.06e-11!238;UBERON:0002385!2.72e-11!63;UBERON:0001015!2.72e-11!63;UBERON:0000383!2.72e-11!63;UBERON:0001134!4.73e-11!61;UBERON:0002036!4.73e-11!61;UBERON:0003082!4.73e-11!61;UBERON:0000467!7.86e-10!625;UBERON:0000480!1.35e-09!626;UBERON:0000062!8.12e-09!511;UBERON:0002199!8.19e-09!45;UBERON:0002416!8.19e-09!45;UBERON:0002097!9.16e-08!40;UBERON:0004923!2.96e-07!57;UBERON:0001013!5.90e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;2.46e-08;198!UBERON:0001013;4.90e-07;14!UBERON:0002385;8.39e-07;31!UBERON:0001015;8.39e-07;31!UBERON:0000383;8.39e-07;31!UBERON:0002199;8.68e-07;46!UBERON:0002416;8.68e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.54e-14,99;UBERON:0003104,1.63e-13,160;UBERON:0009142,1.63e-13,160;UBERON:0007524,1.03e-12,73;UBERON:0002329,1.28e-12,71;UBERON:0003059,1.28e-12,71;UBERON:0007282,1.28e-12,71;UBERON:0004290,1.28e-12,71;UBERON:0009618,1.28e-12,71;UBERON:0003077,2.68e-12,72;UBERON:0007285,2.68e-12,72;UBERON:0000486,5.61e-12,83;UBERON:0005256,6.48e-12,122;UBERON:0002385,7.39e-12,64;UBERON:0001015,7.39e-12,64;UBERON:0000383,7.39e-12,64;UBERON:0007503,1.21e-11,78;UBERON:0001134,1.29e-11,62;UBERON:0002036,1.29e-11,62;UBERON:0003082,1.29e-11,62;UBERON:0002100,1.20e-10,199;UBERON:0002199,2.60e-09,46;UBERON:0002416,2.60e-09,46;UBERON:0004923,1.11e-08,66;UBERON:0002097,3.04e-08,41;UBERON:0001013,5.00e-07,14;UBERON:0000490,5.15e-07,148 | |||
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| ||
|short_description=p1@COL12A1 | |short_description=p1@COL12A1 | ||
}} | }} |
Latest revision as of 20:34, 19 September 2015
Short description: | p1@COL12A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL12A1_5end |
Coexpression cluster: | C1280_Preadipocyte_Fibroblast_Adipocyte_leiomyoblastoma_Ewing_Chondrocyte_spindle |
Association with transcript: | 0bp_to_ENST00000322507_5end |
EntrezGene: | COL12A1 |
HGNC: | 2188 |
UniProt: | Q99715 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.17e-21 | 76 |
muscle precursor cell | 1.38e-10 | 58 |
myoblast | 1.38e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.38e-10 | 58 |
skin fibroblast | 5.51e-10 | 23 |
muscle cell | 6.42e-10 | 55 |
fat cell | 9.00e-09 | 15 |
electrically responsive cell | 9.77e-08 | 61 |
electrically active cell | 9.77e-08 | 61 |
stromal cell | 3.45e-07 | 28 |
smooth muscle cell | 5.94e-07 | 43 |
smooth muscle myoblast | 5.94e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.54e-14 | 99 |
mesenchyme | 1.63e-13 | 160 |
entire embryonic mesenchyme | 1.63e-13 | 160 |
dense mesenchyme tissue | 1.03e-12 | 73 |
somite | 1.28e-12 | 71 |
presomitic mesoderm | 1.28e-12 | 71 |
presumptive segmental plate | 1.28e-12 | 71 |
dermomyotome | 1.28e-12 | 71 |
trunk paraxial mesoderm | 1.28e-12 | 71 |
paraxial mesoderm | 2.68e-12 | 72 |
presumptive paraxial mesoderm | 2.68e-12 | 72 |
multilaminar epithelium | 5.61e-12 | 83 |
trunk mesenchyme | 6.48e-12 | 122 |
muscle tissue | 7.39e-12 | 64 |
musculature | 7.39e-12 | 64 |
musculature of body | 7.39e-12 | 64 |
epithelial vesicle | 1.21e-11 | 78 |
skeletal muscle tissue | 1.29e-11 | 62 |
striated muscle tissue | 1.29e-11 | 62 |
myotome | 1.29e-11 | 62 |
trunk | 1.20e-10 | 199 |
integument | 2.60e-09 | 46 |
integumental system | 2.60e-09 | 46 |
organ component layer | 1.11e-08 | 66 |
skin of body | 3.04e-08 | 41 |
adipose tissue | 5.00e-07 | 14 |
unilaminar epithelium | 5.15e-07 | 148 |