FFCP PHASE1:Hg19::chr7:86273921..86273930,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:86273921..86273930,+ to FFCP PHASE1:Hg19::chr7:86273921..86273930,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2913 | |EntrezGene=2913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4595 | |HGNC=4595 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYZ2 | |UniProt=F5GYZ2 | ||
|association_with_transcript=-21bp_to_ENST00000536043_5end | |||
|cluster_id=chr7:86273921..86273930,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_10_at_GRM3_5end | |||
|id=chr7:86273921..86273930,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;6.92e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.97e-95!57;UBERON:0005068!4.97e-95!57;UBERON:0006241!4.97e-95!57;UBERON:0007135!4.97e-95!57;UBERON:0002780!5.55e-87!41;UBERON:0001890!5.55e-87!41;UBERON:0006240!5.55e-87!41;UBERON:0003080!8.54e-85!42;UBERON:0002616!2.84e-81!59;UBERON:0001893!1.65e-78!34;UBERON:0002020!1.05e-77!34;UBERON:0003528!1.05e-77!34;UBERON:0000955!4.23e-76!69;UBERON:0006238!4.23e-76!69;UBERON:0001017!7.67e-75!82;UBERON:0002791!1.44e-74!33;UBERON:0005743!4.63e-71!86;UBERON:0001869!1.33e-70!32;UBERON:0003075!2.62e-64!86;UBERON:0007284!2.62e-64!86;UBERON:0000073!1.08e-63!94;UBERON:0001016!1.08e-63!94;UBERON:0002346!4.02e-61!90;UBERON:0002619!2.75e-57!22;UBERON:0003056!1.22e-56!61;UBERON:0000956!3.58e-50!25;UBERON:0000203!3.58e-50!25;UBERON:0001950!9.19e-50!20;UBERON:0007023!5.14e-49!115;UBERON:0000033!2.76e-42!123;UBERON:0000153!5.70e-40!129;UBERON:0007811!5.70e-40!129;UBERON:0004121!3.57e-34!169;UBERON:0000924!3.34e-33!173;UBERON:0006601!3.34e-33!173;UBERON:0002308!2.43e-29!9;UBERON:0000125!2.43e-29!9;UBERON:0002420!5.64e-23!9;UBERON:0007245!5.64e-23!9;UBERON:0010009!5.64e-23!9;UBERON:0010011!5.64e-23!9;UBERON:0000454!5.64e-23!9;UBERON:0000025!1.47e-22!194;UBERON:0009663!4.64e-22!7;UBERON:0001871!9.00e-19!7;UBERON:0000200!6.68e-18!6;UBERON:0004111!1.37e-16!241;UBERON:0001872!1.35e-14!5;UBERON:0002021!2.99e-14!5;UBERON:0000349!3.81e-14!5;UBERON:0000477!9.52e-14!286;UBERON:0000988!2.66e-13!3;UBERON:0002298!3.14e-13!8;UBERON:0002771!3.16e-13!3;UBERON:0006331!4.44e-13!3;UBERON:0003076!4.46e-13!15;UBERON:0003057!4.46e-13!15;UBERON:0000483!4.88e-13!309;UBERON:0000119!7.85e-13!312;UBERON:0000475!2.71e-12!365;UBERON:0000064!8.26e-11!219;UBERON:0001875!2.77e-10!2;UBERON:0006514!2.77e-10!2;UBERON:0001894!3.33e-10!7;UBERON:0006222!3.33e-10!7;UBERON:0000369!4.12e-10!4;UBERON:0002435!4.12e-10!4;UBERON:0000204!4.12e-10!4;UBERON:0010082!4.12e-10!4;UBERON:0001897!1.01e-09!2;UBERON:0001954!1.69e-09!2;UBERON:0003022!1.69e-09!2;UBERON:0002421!1.69e-09!2;UBERON:0002600!1.69e-09!2;UBERON:0002148!4.51e-09!2;UBERON:0009662!4.51e-09!2;UBERON:0004733!1.34e-08!12;UBERON:0002028!1.34e-08!12;UBERON:0007277!1.34e-08!12;UBERON:0000062!3.11e-08!511;UBERON:0004732!6.47e-08!13;UBERON:0002680!1.34e-07!9;UBERON:0001895!1.34e-07!9;UBERON:0010092!1.34e-07!9;UBERON:0002240!7.80e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.81e-33;41!UBERON:0001890;2.81e-33;41!UBERON:0001893;5.79e-32;34!UBERON:0001869;4.41e-31;32!UBERON:0002791;1.01e-29;32!UBERON:0001875;3.93e-29;2!UBERON:0006514;3.93e-29;2!UBERON:0003528;2.27e-28;34!UBERON:0002020;2.27e-28;34!UBERON:0000073;9.05e-26;53!UBERON:0002616;9.05e-26;53!UBERON:0001950;4.85e-24;20!UBERON:0002619;6.14e-22;22!UBERON:0000956;2.18e-19;25!UBERON:0000203;2.18e-19;25!UBERON:0009663;9.07e-19;7!UBERON:0001016;9.00e-16;83!UBERON:0001017;1.64e-15;75!UBERON:0002581;1.78e-15;1!UBERON:0001882;1.78e-15;1!UBERON:0002022;1.78e-15;1!UBERON:0002336;1.78e-15;1!UBERON:0011215;1.78e-15;1!UBERON:0001018;1.78e-15;1!UBERON:0002473;1.78e-15;1!UBERON:0005340;1.78e-15;1!UBERON:0003544;1.78e-15;1!UBERON:0005970;1.78e-15;1!UBERON:0002316;1.78e-15;1!UBERON:0001020;1.78e-15;1!UBERON:0005403;1.78e-15;1!UBERON:0002437;1.78e-15;1!UBERON:0002420;9.52e-15;9!UBERON:0000125;9.52e-15;9!UBERON:0007245;9.52e-15;9!UBERON:0002308;9.52e-15;9!UBERON:0010009;9.52e-15;9!UBERON:0010011;9.52e-15;9!UBERON:0000454;9.52e-15;9!UBERON:0000955;1.67e-12;68!UBERON:0001872;1.78e-12;5!UBERON:0005162;2.15e-08;2!UBERON:0000122;2.15e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.39e-40,56;UBERON:0005068,1.39e-40,56;UBERON:0006241,1.39e-40,56;UBERON:0007135,1.39e-40,56;UBERON:0002780,1.27e-39,41;UBERON:0001890,1.27e-39,41;UBERON:0003080,1.27e-39,41;UBERON:0006240,1.27e-39,41;UBERON:0001893,2.55e-39,34;UBERON:0000073,1.79e-36,53;UBERON:0002616,1.79e-36,53;UBERON:0002791,8.54e-34,32;UBERON:0001869,8.54e-34,32;UBERON:0003528,7.98e-32,34;UBERON:0002020,7.98e-32,34;UBERON:0001875,3.41e-29,2;UBERON:0006514,3.41e-29,2;UBERON:0000955,6.76e-28,68;UBERON:0006238,6.76e-28,68;UBERON:0001017,1.58e-27,81;UBERON:0003075,1.58e-27,82;UBERON:0007284,1.58e-27,82;UBERON:0003056,1.57e-26,61;UBERON:0002346,3.29e-26,86;UBERON:0001016,1.01e-24,89;UBERON:0001950,3.97e-24,20;UBERON:0002619,5.12e-22,22;UBERON:0010371,1.63e-21,104;UBERON:0000956,1.85e-19,25;UBERON:0000203,1.85e-19,25;UBERON:0009663,1.16e-18,7;UBERON:0010314,1.01e-16,132;UBERON:0002336,1.34e-15,1;UBERON:0011215,1.34e-15,1;UBERON:0001018,1.34e-15,1;UBERON:0002473,1.34e-15,1;UBERON:0005340,1.34e-15,1;UBERON:0003544,1.34e-15,1;UBERON:0005970,1.34e-15,1;UBERON:0002316,1.34e-15,1;UBERON:0001020,1.34e-15,1;UBERON:0002437,1.34e-15,1;UBERON:0002022,1.54e-15,1;UBERON:0002581,2.75e-15,1;UBERON:0001882,3.66e-15,1;UBERON:0005403,3.66e-15,1;UBERON:0002420,1.15e-14,9;UBERON:0000125,1.15e-14,9;UBERON:0007245,1.15e-14,9;UBERON:0002308,1.15e-14,9;UBERON:0010009,1.15e-14,9;UBERON:0010011,1.15e-14,9;UBERON:0000454,1.15e-14,9;UBERON:0004121,1.79e-12,171;UBERON:0000924,1.79e-12,171;UBERON:0006601,1.79e-12,171;UBERON:0001872,2.12e-12,5;UBERON:0007023,2.40e-11,114;UBERON:0000025,4.13e-11,192;UBERON:0011216,6.13e-11,223;UBERON:0004111,1.30e-08,240;UBERON:0005162,1.86e-08,2;UBERON:0000122,1.86e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28062152663286,0,2.10838001152805,0,0,0,0,0,1.53036380815245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,1.26621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,1.09524303113594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,1.27574068981852,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.500763722825999,0,0,0.745156835296601,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02766760154335,0,0.159633859057151,0.82046545696302,1.76450187355203,0.829887029570615,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87798860003913,0,0.620060389503552,0.697573912132975,3.28184885410932,0,0,0,0,0,0.336283722218824,0,0,0,0,0,1.15548546060614,1.11813715056843,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,1.18818560130834,0,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0.407948941145488,2.61810414204226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28062152663286,0,2.10838001152805,0,0,0,0,0,1.53036380815245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,1.26621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,1.09524303113594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,1.27574068981852,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.500763722825999,0,0,0.745156835296601,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02766760154335,0,0.159633859057151,0.82046545696302,1.76450187355203,0.829887029570615,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87798860003913,0,0.620060389503552,0.697573912132975,3.28184885410932,0,0,0,0,0,0.336283722218824,0,0,0,0,0,1.15548546060614,1.11813715056843,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,1.18818560130834,0,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0.407948941145488,2.61810414204226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@GRM3 | |||
}} | }} |
Latest revision as of 20:29, 19 September 2015
Short description: | p10@GRM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GRM3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -21bp_to_ENST00000536043_5end |
EntrezGene: | GRM3 |
HGNC: | 4595 |
UniProt: | F5GYZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data