FFCP PHASE1:Hg19::chr2:209118767..209118804,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3417 | |EntrezGene=3417 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5382 | |HGNC=5382 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=105bp_to_uc002vcs.2_5end | |association_with_transcript=105bp_to_uc002vcs.2_5end | ||
|cluster_id=chr2:209118767..209118804,- | |||
|coexpression_cluster_id=C1314 | |||
|description=CAGE_peak_6_at_IDH1_5end | |description=CAGE_peak_6_at_IDH1_5end | ||
|id=chr2:209118767..209118804,- | |id=chr2:209118767..209118804,- | ||
|ontology_enrichment_celltype=CL:0000066!1.01e-07!254;CL:0000136!1.93e-07!15;CL:0000181!2.51e-07!12;CL:0000417!2.51e-07!12;CL:0000668!2.51e-07!12;CL:0000414!2.51e-07!12;CL:0000412!2.51e-07!12;CL:0000182!2.51e-07!12;CL:0000223!7.81e-07!59 | |ontology_enrichment_celltype=CL:0000066!1.01e-07!254;CL:0000136!1.93e-07!15;CL:0000181!2.51e-07!12;CL:0000417!2.51e-07!12;CL:0000668!2.51e-07!12;CL:0000414!2.51e-07!12;CL:0000412!2.51e-07!12;CL:0000182!2.51e-07!12;CL:0000223!7.81e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.95e-13;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.06e-13,12;CL:0000066,2.83e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.06e-11;13!UBERON:0004161;1.08e-10;11!UBERON:0008947;3.30e-09;29!UBERON:0001041;4.04e-08;30 | |||
|ontology_enrichment_disease=DOID:305!2.00e-17!106;DOID:14566!4.32e-17!239;DOID:162!1.87e-16!235;DOID:0050687!4.79e-16!143 | |ontology_enrichment_disease=DOID:305!2.00e-17!106;DOID:14566!4.32e-17!239;DOID:162!1.87e-16!235;DOID:0050687!4.79e-16!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.58e-19,106;DOID:14566,2.66e-16,239;DOID:162,4.74e-16,235;DOID:0050687,1.73e-15,143 | |||
|ontology_enrichment_uberon=UBERON:0004921!5.20e-12!129;UBERON:0004185!5.20e-12!129;UBERON:0000077!1.95e-10!130;UBERON:0003101!3.17e-10!22;UBERON:0000079!3.17e-10!22;UBERON:0001007!3.49e-10!155;UBERON:0001555!3.49e-10!155;UBERON:0007026!3.49e-10!155;UBERON:0004119!4.33e-10!169;UBERON:0000925!4.33e-10!169;UBERON:0006595!4.33e-10!169;UBERON:0001737!7.35e-09!9;UBERON:0001041!5.82e-08!98;UBERON:0005911!1.91e-07!82;UBERON:0003929!3.35e-07!54 | |ontology_enrichment_uberon=UBERON:0004921!5.20e-12!129;UBERON:0004185!5.20e-12!129;UBERON:0000077!1.95e-10!130;UBERON:0003101!3.17e-10!22;UBERON:0000079!3.17e-10!22;UBERON:0001007!3.49e-10!155;UBERON:0001555!3.49e-10!155;UBERON:0007026!3.49e-10!155;UBERON:0004119!4.33e-10!169;UBERON:0000925!4.33e-10!169;UBERON:0006595!4.33e-10!169;UBERON:0001737!7.35e-09!9;UBERON:0001041!5.82e-08!98;UBERON:0005911!1.91e-07!82;UBERON:0003929!3.35e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.41e-19;9!UBERON:0001557;1.41e-19;9!UBERON:0002107;6.11e-12;19!UBERON:0006925;6.11e-12;19!UBERON:0002423;1.67e-10;25!UBERON:0000473;4.42e-07;8!UBERON:0000072;4.44e-07;37!UBERON:0003135;5.42e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.01e-19,9;UBERON:0008835,2.33e-12,22;UBERON:0003894,2.33e-12,22;UBERON:0002107,5.30e-12,19;UBERON:0006925,5.30e-12,19;UBERON:0008836,5.30e-12,19;UBERON:0009854,1.05e-11,23;UBERON:0001041,3.55e-11,87;UBERON:0007499,1.49e-10,25;UBERON:0009497,1.49e-10,25;UBERON:0000015,1.49e-10,25;UBERON:0002423,1.49e-10,25;UBERON:0006235,1.49e-10,25;UBERON:0004161,1.49e-10,25;UBERON:0009856,4.80e-10,26;UBERON:0004921,1.20e-09,118;UBERON:0001557,2.12e-08,19;UBERON:0001007,2.98e-07,145;UBERON:0001555,2.98e-07,145;UBERON:0007026,2.98e-07,145;UBERON:0000473,3.71e-07,8;UBERON:0003135,3.72e-07,11 | |||
|phase1_expression=0.363356758541113,7.27941781229343,1.12763523276777,0,0.446961094427288,0.872338524100369,2.53299878168311,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0.971680998056939,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.361439152384566,0.50133791063589,1.15877215168659,0,0,0,0,0,0.196468613246569,0,0,4.86821090482025,3.13433527138681,1.46253756570752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.926864265692532,1.43418310374407,1.06400514659507,0.560677600142307,0,0.24666754841716,0.311211035399766,0.942974704487816,0,0,0,0.468642863667593,0,0,0,0,0.161872944368132,0,0,0,0.929932030581889,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0.504641701751257,0,0,0,0,0,0,2.72105640091641,1.34867752062481,2.41011029883482,1.7647035637183,3.26819166138609,1.89816495288877,2.56179485504312,1.56977172100277,1.15424147083917,0,0,0,0,8.87285243752816,7.86261773342101,23.6315962672562,0,0.614942192715568,0,0,0,0,0,0.977424915930974,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.297262324577456,0,0,0.141775097242386,0.179117045405697,0,0,12.8092441852945,0.44024217006613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0.791951872933429,0.904318131178758,1.74306691720059,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0,0.256278298511402,0,0,0,0,0,0.164254312027618,0,0,0.362578348774867,0.200506470303285,0.552485933615378,1.37777337797528,0.910455840033585,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0.650756789328606,5.66725564062472,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0.0890320356467374,0.991709492165869,0,0,0.708104465988849,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0,0,1.71175595213568,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.818999468447914,1.41405431953713,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0,0,0,0,1.26664581178598,0.329294892959902,0,0,0,0,0,5.36619664427641,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0.191505370132367,1.2700414963433,0,0,0,0,0,0,0,0,1.27753871307098,0.343505344755765,0.307240764308458,0.671028323677248,0.166849141711909,1.9538809540204,0.278406173895242,0,0.540911356951966,0,4.22961015263549,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.0881502364194,0,0.295930216910801,0,0,0,0,0,0,0.174919999992391,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,9.47764632615214,1.25481369850743,0,0.113942055847001,0,0,14.3414530937051,0,0.183195186803725,0,0,0,3.32423363800313,2.25595660617181,0.588187602953219,0.671286347903371,0.189753732724185,3.01979500062719,0.210998064528027,0,0.848118428603645,0,0,0.530745387020035,0,0,0.370691816839509,0.208843899010911,0.202203398942031,0,0,0,1.76098157038881,0.242780379534093,1.97292201424695,0,0,0,0,0,0.664653872707185,0,0,0,0,0.138674673013139,0,0.391969589657511,0.0870592065804026,0.873633341210151,0.171986032471617,7.1599685153923,8.1129141965666,3.28461828212837,0,0.353024506766001,0,0,0,0,0,0.0801588202515337,0.213452994739353,1.79828648623917,3.16998917739033,0,0.343189995723929,10.8041098491112,0.124252535565433,2.82832841540154,0,0,0.101998217636322,1.44475294950759,0,0,0,0,0,0,0.229160424011684,0,0.798716001995964,0.429226048136571,0,0.201550417460179,0,3.49487848582361,3.46646002151784,3.54388191039016,4.4486338943762,14.4688397826681,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.788057072991982,0,0,6.63363155531526,0.575745591958336,0,1.32418394073086,0,0.542999601753713,1.72844298240254,0,0,1.97022049798414,0,0.679872549120754,12.8965965636713,1.32506888912221,0,0,21.8991152491942,0,0.854299300541557,0,0.414239055347196,0,0,0,1.91502377331055,2.1760712134779,0.2506898940227,3.06345576763462,1.31149052283922,0.471162288750703,0,0,0,0,0,0,0.415045904808692,0,1.51649117541648,0.285465333544967,0.235265819698172,0,0,0.298509605773748,0.701139929541673,0,0,0,0,7.09404212030463,0.756154618816195,0,0.147855149989634,0.318593534327405,0,0.155262956876259,0,0,0,0,1.14241563650639,0.406870733204662,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,1.50109113962448,0,1.13352962756136,0,0,0,0.308801447160972,1.97355644620836,0.176689145945881,0.192914038270915,0.844712203265363,0,0.345430341731199,0.607719912354764,0,0,0,0.163565394255844,1.31043939538565,0.245772908753719,0.422624246717254,0,0,0,0,0.368211900503681,0.559518030877778,0.622077260032973,0.255788742607303,0,0,0,0,0.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| ||
|short_description=p6@IDH1 | |short_description=p6@IDH1 | ||
}} | }} |
Latest revision as of 20:14, 19 September 2015
Short description: | p6@IDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IDH1_5end |
Coexpression cluster: | C1314_bile_lung_hepatoma_Hepatocyte_Mast_choriocarcinoma_giant |
Association with transcript: | 105bp_to_uc002vcs.2_5end |
EntrezGene: | IDH1 |
HGNC: | 5382 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.06e-13 | 12 |
epithelial cell | 2.83e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.01e-19 | 9 |
hepatic diverticulum | 2.33e-12 | 22 |
liver primordium | 2.33e-12 | 22 |
liver | 5.30e-12 | 19 |
digestive gland | 5.30e-12 | 19 |
liver bud | 5.30e-12 | 19 |
digestive tract diverticulum | 1.05e-11 | 23 |
foregut | 3.55e-11 | 87 |
epithelial sac | 1.49e-10 | 25 |
epithelium of foregut-midgut junction | 1.49e-10 | 25 |
anatomical boundary | 1.49e-10 | 25 |
hepatobiliary system | 1.49e-10 | 25 |
foregut-midgut junction | 1.49e-10 | 25 |
septum transversum | 1.49e-10 | 25 |
sac | 4.80e-10 | 26 |
subdivision of digestive tract | 1.20e-09 | 118 |
upper respiratory tract | 2.12e-08 | 19 |
digestive system | 2.98e-07 | 145 |
digestive tract | 2.98e-07 | 145 |
primitive gut | 2.98e-07 | 145 |
testis | 3.71e-07 | 8 |
male reproductive organ | 3.72e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.58e-19 | 106 |
disease of cellular proliferation | 2.66e-16 | 239 |
cancer | 4.74e-16 | 235 |
cell type cancer | 1.73e-15 | 143 |