FFCP PHASE1:Hg19::chrX:144903040..144903070,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84631 | |EntrezGene=84631 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13449 | |HGNC=13449 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H156,B3KTY4 | |UniProt=Q9H156,B3KTY4 | ||
|association_with_transcript=174bp_to_ENST00000413937,ENST00000428560,ENST00000434188,NM_001144006,NM_001144008,NM_001144009,NM_001144010,uc004fcg.2,uc011mwr.1,uc011mws.1,uc011mwt.1_5end | |association_with_transcript=174bp_to_ENST00000413937,ENST00000428560,ENST00000434188,NM_001144006,NM_001144008,NM_001144009,NM_001144010,uc004fcg.2,uc011mwr.1,uc011mws.1,uc011mwt.1_5end | ||
|cluster_id=chrX:144903040..144903070,+ | |||
|coexpression_cluster_id=C271 | |||
|description=CAGE_peak_2_at_SLITRK2_5end | |description=CAGE_peak_2_at_SLITRK2_5end | ||
|id=chrX:144903040..144903070,+ | |id=chrX:144903040..144903070,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000064;3.33e-07;3!CL:0000067;3.33e-07;3!CL:0005012;3.33e-07;3!CL:0002304;3.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.78e-07,3;CL:0000067,3.78e-07,3;CL:0005012,3.78e-07,3;CL:0002304,3.78e-07,3;CL:0000047,6.34e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.42e-20;82!UBERON:0006241;3.53e-09;3!UBERON:0003057;3.53e-09;3!UBERON:0006215;5.27e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.18e-75!57;UBERON:0005068!1.18e-75!57;UBERON:0006241!1.18e-75!57;UBERON:0007135!1.18e-75!57;UBERON:0001017!9.97e-73!82;UBERON:0005743!9.14e-71!86;UBERON:0000073!1.56e-68!94;UBERON:0001016!1.56e-68!94;UBERON:0003075!3.43e-64!86;UBERON:0007284!3.43e-64!86;UBERON:0002616!4.09e-63!59;UBERON:0000955!3.38e-62!69;UBERON:0006238!3.38e-62!69;UBERON:0007023!1.03e-61!115;UBERON:0002346!2.22e-60!90;UBERON:0002780!1.31e-58!41;UBERON:0001890!1.31e-58!41;UBERON:0006240!1.31e-58!41;UBERON:0003080!6.89e-57!42;UBERON:0002020!2.41e-51!34;UBERON:0003528!2.41e-51!34;UBERON:0001893!3.00e-51!34;UBERON:0002791!7.95e-50!33;UBERON:0001869!4.82e-48!32;UBERON:0003056!2.31e-47!61;UBERON:0000153!7.34e-46!129;UBERON:0007811!7.34e-46!129;UBERON:0000033!4.12e-43!123;UBERON:0004121!7.62e-43!169;UBERON:0000924!2.81e-41!173;UBERON:0006601!2.81e-41!173;UBERON:0000956!1.50e-37!25;UBERON:0000203!1.50e-37!25;UBERON:0002619!1.52e-34!22;UBERON:0001950!2.14e-31!20;UBERON:0003076!6.04e-19!15;UBERON:0003057!6.04e-19!15;UBERON:0000477!2.11e-17!286;UBERON:0000025!2.89e-17!194;UBERON:0000064!1.66e-16!219;UBERON:0004732!6.81e-16!13;UBERON:0002308!5.45e-15!9;UBERON:0000125!5.45e-15!9;UBERON:0002420!7.62e-15!9;UBERON:0007245!7.62e-15!9;UBERON:0010009!7.62e-15!9;UBERON:0010011!7.62e-15!9;UBERON:0000454!7.62e-15!9;UBERON:0004111!2.03e-14!241;UBERON:0004733!2.57e-14!12;UBERON:0002028!2.57e-14!12;UBERON:0007277!2.57e-14!12;UBERON:0000475!8.23e-14!365;UBERON:0000481!5.27e-13!347;UBERON:0001871!1.73e-12!7;UBERON:0009663!5.37e-12!7;UBERON:0000062!8.38e-12!511;UBERON:0000483!9.14e-12!309;UBERON:0000119!1.89e-11!312;UBERON:0002680!3.06e-10!9;UBERON:0001895!3.06e-10!9;UBERON:0010092!3.06e-10!9;UBERON:0000200!3.54e-10!6;UBERON:0002298!5.44e-10!8;UBERON:0000467!1.49e-09!625;UBERON:0000480!1.73e-09!626;UBERON:0000922!1.82e-09!612;UBERON:0000349!4.20e-09!5;UBERON:0002021!7.13e-09!5;UBERON:0002050!7.29e-09!605;UBERON:0005423!7.29e-09!605;UBERON:0001872!7.85e-09!5;UBERON:0000468!8.28e-09!659;UBERON:0001894!1.03e-08!7;UBERON:0006222!1.03e-08!7;UBERON:0000923!1.78e-08!604;UBERON:0005291!1.78e-08!604;UBERON:0006598!1.78e-08!604;UBERON:0002532!1.78e-08!604;UBERON:0000369!2.16e-07!4;UBERON:0002435!2.16e-07!4;UBERON:0000204!2.16e-07!4;UBERON:0010082!2.16e-07!4 | |ontology_enrichment_uberon=UBERON:0001049!1.18e-75!57;UBERON:0005068!1.18e-75!57;UBERON:0006241!1.18e-75!57;UBERON:0007135!1.18e-75!57;UBERON:0001017!9.97e-73!82;UBERON:0005743!9.14e-71!86;UBERON:0000073!1.56e-68!94;UBERON:0001016!1.56e-68!94;UBERON:0003075!3.43e-64!86;UBERON:0007284!3.43e-64!86;UBERON:0002616!4.09e-63!59;UBERON:0000955!3.38e-62!69;UBERON:0006238!3.38e-62!69;UBERON:0007023!1.03e-61!115;UBERON:0002346!2.22e-60!90;UBERON:0002780!1.31e-58!41;UBERON:0001890!1.31e-58!41;UBERON:0006240!1.31e-58!41;UBERON:0003080!6.89e-57!42;UBERON:0002020!2.41e-51!34;UBERON:0003528!2.41e-51!34;UBERON:0001893!3.00e-51!34;UBERON:0002791!7.95e-50!33;UBERON:0001869!4.82e-48!32;UBERON:0003056!2.31e-47!61;UBERON:0000153!7.34e-46!129;UBERON:0007811!7.34e-46!129;UBERON:0000033!4.12e-43!123;UBERON:0004121!7.62e-43!169;UBERON:0000924!2.81e-41!173;UBERON:0006601!2.81e-41!173;UBERON:0000956!1.50e-37!25;UBERON:0000203!1.50e-37!25;UBERON:0002619!1.52e-34!22;UBERON:0001950!2.14e-31!20;UBERON:0003076!6.04e-19!15;UBERON:0003057!6.04e-19!15;UBERON:0000477!2.11e-17!286;UBERON:0000025!2.89e-17!194;UBERON:0000064!1.66e-16!219;UBERON:0004732!6.81e-16!13;UBERON:0002308!5.45e-15!9;UBERON:0000125!5.45e-15!9;UBERON:0002420!7.62e-15!9;UBERON:0007245!7.62e-15!9;UBERON:0010009!7.62e-15!9;UBERON:0010011!7.62e-15!9;UBERON:0000454!7.62e-15!9;UBERON:0004111!2.03e-14!241;UBERON:0004733!2.57e-14!12;UBERON:0002028!2.57e-14!12;UBERON:0007277!2.57e-14!12;UBERON:0000475!8.23e-14!365;UBERON:0000481!5.27e-13!347;UBERON:0001871!1.73e-12!7;UBERON:0009663!5.37e-12!7;UBERON:0000062!8.38e-12!511;UBERON:0000483!9.14e-12!309;UBERON:0000119!1.89e-11!312;UBERON:0002680!3.06e-10!9;UBERON:0001895!3.06e-10!9;UBERON:0010092!3.06e-10!9;UBERON:0000200!3.54e-10!6;UBERON:0002298!5.44e-10!8;UBERON:0000467!1.49e-09!625;UBERON:0000480!1.73e-09!626;UBERON:0000922!1.82e-09!612;UBERON:0000349!4.20e-09!5;UBERON:0002021!7.13e-09!5;UBERON:0002050!7.29e-09!605;UBERON:0005423!7.29e-09!605;UBERON:0001872!7.85e-09!5;UBERON:0000468!8.28e-09!659;UBERON:0001894!1.03e-08!7;UBERON:0006222!1.03e-08!7;UBERON:0000923!1.78e-08!604;UBERON:0005291!1.78e-08!604;UBERON:0006598!1.78e-08!604;UBERON:0002532!1.78e-08!604;UBERON:0000369!2.16e-07!4;UBERON:0002435!2.16e-07!4;UBERON:0000204!2.16e-07!4;UBERON:0010082!2.16e-07!4 | ||
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|short_description=p2@SLITRK2 | |short_description=p2@SLITRK2 | ||
}} | }} |
Latest revision as of 20:01, 19 September 2015
Short description: | p2@SLITRK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLITRK2_5end |
Coexpression cluster: | C271_pineal_spinal_locus_globus_medulla_thalamus_cerebellum |
Association with transcript: | 174bp_to_ENST00000413937, ENST00000428560, ENST00000434188, NM_001144006, NM_001144008, NM_001144009, NM_001144010, uc004fcg.2, uc011mwr.1, uc011mws.1, uc011mwt.1_5end |
EntrezGene: | SLITRK2 |
HGNC: | 13449 |
UniProt: | Q9H156B3KTY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.78e-07 | 3 |
ciliated epithelial cell | 3.78e-07 | 3 |
multi-ciliated epithelial cell | 3.78e-07 | 3 |
non-pigmented ciliary epithelial cell | 3.78e-07 | 3 |
neuronal stem cell | 6.34e-07 | 8 |