FFCP PHASE1:Hg19::chr11:67275590..67275616,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:67275590..67275616,- to FFCP PHASE1:Hg19::chr11:67275590..67275616,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10263 | |EntrezGene=10263 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30833 | |HGNC=30833 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQJ3 | |UniProt=E9PQJ3 | ||
|association_with_transcript=12bp_to_ENST00000531178,uc009yry.2_5end | |||
|cluster_id=chr11:67275590..67275616,- | |||
|coexpression_cluster_id=C3194 | |||
|description=CAGE_peak_3_at_CDK2AP2_5end | |||
|id=chr11:67275590..67275616,- | |||
|ontology_enrichment_celltype=CL:0002321!1.01e-22!248;CL:0000220!1.49e-22!246;CL:0000066!6.32e-16!254;CL:0000548!4.19e-15!679;CL:0000004!4.19e-15!679;CL:0000255!4.19e-15!679;CL:0000012!2.71e-14!682;CL:0000222!3.41e-14!119;CL:0002371!1.36e-12!591;CL:0000144!1.58e-11!625;CL:0000003!2.95e-11!722;CL:0000183!4.40e-11!59;CL:0000055!1.94e-10!180;CL:0000192!9.19e-10!42;CL:0000514!9.19e-10!42;CL:0000359!1.01e-09!32;CL:1000497!3.33e-09!18;CL:0002518!3.33e-09!18;CL:1000449!6.92e-09!16;CL:0000115!7.83e-09!35;CL:0000187!9.13e-09!54;CL:0002078!1.80e-08!44;CL:0000680!5.11e-08!57;CL:0000056!5.11e-08!57;CL:0000355!5.11e-08!57;CL:0000393!1.49e-07!60;CL:0000211!1.49e-07!60;CL:0002681!3.79e-07!13;CL:0002584!3.79e-07!13;CL:0002139!4.16e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:1000497;7.96e-11;17!CL:0002518;7.96e-11;17!CL:1000449;1.52e-10;15!CL:0000359;2.21e-09;32!CL:0002681;9.03e-09;12!CL:0002584;9.03e-09;12!CL:0000115;8.81e-08;36!CL:1000507;1.92e-07;10!CL:1000494;1.92e-07;10!CL:0002139;5.01e-07;24!CL:0000192;8.52e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.29e-22,250;CL:0000066,2.19e-16,253;CL:0000222,5.28e-14,121;CL:1000497,1.07e-10,17;CL:0002518,1.07e-10,17;CL:1000449,1.80e-10,15;CL:0000359,1.01e-09,32;CL:0000115,2.47e-09,36;CL:0002078,6.17e-09,45;CL:0000192,6.42e-09,43;CL:0000514,6.42e-09,43;CL:0002681,1.04e-08,12;CL:0002584,1.04e-08,12;CL:0000187,4.37e-08,55;CL:1000507,2.09e-07,10;CL:1000494,2.09e-07,10;CL:0000680,2.13e-07,58;CL:0000056,2.13e-07,58;CL:0000355,2.13e-07,58;CL:0002139,4.15e-07,24;CL:0000393,5.63e-07,61;CL:0000211,5.63e-07,61;CL:0000213,8.37e-07,58;CL:0000215,8.37e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;8.52e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!4.94e-23!118;UBERON:0002049!2.71e-17!79;UBERON:0007798!2.71e-17!79;UBERON:0002100!3.18e-17!216;UBERON:0000055!4.70e-16!69;UBERON:0005256!7.79e-16!143;UBERON:0001009!8.82e-16!113;UBERON:0004535!4.22e-15!110;UBERON:0004872!4.99e-15!84;UBERON:0001981!4.07e-14!60;UBERON:0007500!4.07e-14!60;UBERON:0004537!4.07e-14!60;UBERON:0006965!4.07e-14!60;UBERON:0000490!1.21e-13!138;UBERON:0009569!5.68e-13!113;UBERON:0001637!8.82e-12!42;UBERON:0003509!8.82e-12!42;UBERON:0004572!8.82e-12!42;UBERON:0003104!2.49e-11!238;UBERON:0009142!2.49e-11!238;UBERON:0000119!4.18e-11!312;UBERON:0004111!8.98e-11!241;UBERON:0000483!2.00e-10!309;UBERON:0000477!5.14e-10!286;UBERON:0004211!6.92e-09!16;UBERON:0001285!6.92e-09!16;UBERON:0007684!6.92e-09!16;UBERON:0003220!6.92e-09!16;UBERON:0004208!6.92e-09!16;UBERON:0000080!7.52e-09!18;UBERON:0002120!7.52e-09!18;UBERON:0004875!7.52e-09!18;UBERON:0005721!7.52e-09!18;UBERON:0005754!7.52e-09!18;UBERON:0007297!7.52e-09!18;UBERON:0006555!8.95e-09!17;UBERON:0005103!8.95e-09!17;UBERON:0000083!8.95e-09!17;UBERON:0009201!8.95e-09!17;UBERON:0004819!8.95e-09!17;UBERON:0006553!8.95e-09!17;UBERON:0003074!8.95e-09!17;UBERON:0003060!8.95e-09!17;UBERON:0000466!9.42e-09!126;UBERON:0003064!1.07e-08!37;UBERON:0004573!2.19e-08!33;UBERON:0004571!2.19e-08!33;UBERON:0004876!2.92e-08!20;UBERON:0001008!3.70e-08!45;UBERON:0000025!5.63e-08!194;UBERON:0006554!7.32e-08!44;UBERON:0000353!1.06e-07!17;UBERON:0000475!1.20e-07!365;UBERON:0000486!1.80e-07!82;UBERON:0003103!2.04e-07!69;UBERON:0002417!2.24e-07!61;UBERON:0000916!2.24e-07!61;UBERON:0000058!2.99e-07!26;UBERON:0000464!3.11e-07!104;UBERON:0001225!3.79e-07!13;UBERON:0008987!3.79e-07!13;UBERON:0004290!6.13e-07!70;UBERON:0000914!7.41e-07!83;UBERON:0002329!7.41e-07!83;UBERON:0003077!7.41e-07!83;UBERON:0003059!7.41e-07!83;UBERON:0007282!7.41e-07!83;UBERON:0009618!7.41e-07!83;UBERON:0007285!7.41e-07!83;UBERON:0000487!7.79e-07!22;UBERON:0003887!7.88e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.49e-10;74!UBERON:0006555;1.52e-10;15!UBERON:0004819;1.52e-10;15!UBERON:0001285;1.52e-10;15!UBERON:0007684;1.52e-10;15!UBERON:0000353;8.12e-09;15!UBERON:0001225;9.03e-09;12!UBERON:0008987;9.03e-09;12!UBERON:0007500;1.37e-08;56!UBERON:0001981;1.37e-08;56!UBERON:0004537;1.37e-08;56!UBERON:0001637;2.02e-08;42!UBERON:0003509;2.02e-08;42!UBERON:0004572;2.02e-08;42!UBERON:0000025;2.72e-08;93!UBERON:0006554;4.11e-08;30!UBERON:0001008;4.11e-08;30!UBERON:0001851;4.15e-08;15!UBERON:0000055;7.28e-08;65!UBERON:0004573;9.83e-08;33!UBERON:0004571;9.83e-08;33!UBERON:0002049;1.19e-07;75!UBERON:0007798;1.19e-07;75!UBERON:0004211;1.92e-07;10!UBERON:0009773;1.92e-07;10!UBERON:0001231;1.92e-07;10!UBERON:0004810;1.92e-07;10!UBERON:0000490;4.78e-07;33!UBERON:0000487;9.02e-07;22 | |||
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| ||
|short_description=p3@CDK2AP2 | |||
}} | }} |
Latest revision as of 18:41, 19 September 2015
Short description: | p3@CDK2AP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDK2AP2_5end |
Coexpression cluster: | C3194_Renal_pleomorphic_Alveolar_Mesenchymal_Osteoblast_gastric_glioma |
Association with transcript: | 12bp_to_ENST00000531178, uc009yry.2_5end |
EntrezGene: | CDK2AP2 |
HGNC: | 30833 |
UniProt: | E9PQJ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.29e-22 | 250 |
epithelial cell | 2.19e-16 | 253 |
mesodermal cell | 5.28e-14 | 121 |
kidney cell | 1.07e-10 | 17 |
kidney epithelial cell | 1.07e-10 | 17 |
epithelial cell of nephron | 1.80e-10 | 15 |
vascular associated smooth muscle cell | 1.01e-09 | 32 |
endothelial cell | 2.47e-09 | 36 |
meso-epithelial cell | 6.17e-09 | 45 |
smooth muscle cell | 6.42e-09 | 43 |
smooth muscle myoblast | 6.42e-09 | 43 |
kidney cortical cell | 1.04e-08 | 12 |
renal cortical epithelial cell | 1.04e-08 | 12 |
muscle cell | 4.37e-08 | 55 |
kidney tubule cell | 2.09e-07 | 10 |
nephron tubule epithelial cell | 2.09e-07 | 10 |
muscle precursor cell | 2.13e-07 | 58 |
myoblast | 2.13e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.13e-07 | 58 |
endothelial cell of vascular tree | 4.15e-07 | 24 |
electrically responsive cell | 5.63e-07 | 61 |
electrically active cell | 5.63e-07 | 61 |
lining cell | 8.37e-07 | 58 |
barrier cell | 8.37e-07 | 58 |