FFCP PHASE1:Hg19::chr14:33403648..33403710,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64067 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19311 | |||
|TSSclassifier=strong | |||
|UniProt=F8VR32,F8VS42 | |||
|association_with_transcript=-428bp_to_ENST00000551492,ENST00000551634_5end | |||
|cluster_id=chr14:33403648..33403710,+ | |||
|coexpression_cluster_id=C1030 | |||
|description=CAGE_peak_3_at_NPAS3_5end | |||
|id=chr14:33403648..33403710,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.64e-09!25;CL:0000047!5.71e-07!8;CL:0000128!6.17e-07!7;CL:0000126!6.17e-07!7;CL:0000127!6.17e-07!7;CL:0002453!6.17e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.41e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.43e-09,3;CL:0000047,1.83e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.16e-17;82!UBERON:0006241;2.93e-09;3!UBERON:0003057;2.93e-09;3!UBERON:0006215;7.14e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.69e-69!82;UBERON:0005743!6.20e-65!86;UBERON:0001049!2.75e-63!57;UBERON:0005068!2.75e-63!57;UBERON:0006241!2.75e-63!57;UBERON:0007135!2.75e-63!57;UBERON:0000073!1.82e-60!94;UBERON:0001016!1.82e-60!94;UBERON:0000955!5.47e-57!69;UBERON:0006238!5.47e-57!69;UBERON:0002616!2.11e-54!59;UBERON:0002346!1.99e-48!90;UBERON:0003075!2.39e-48!86;UBERON:0007284!2.39e-48!86;UBERON:0002780!4.48e-48!41;UBERON:0001890!4.48e-48!41;UBERON:0006240!4.48e-48!41;UBERON:0003080!1.39e-46!42;UBERON:0002020!3.64e-43!34;UBERON:0003528!3.64e-43!34;UBERON:0001893!8.69e-43!34;UBERON:0002791!1.29e-41!33;UBERON:0001869!2.49e-40!32;UBERON:0000924!3.13e-38!173;UBERON:0006601!3.13e-38!173;UBERON:0004121!1.44e-37!169;UBERON:0003056!9.40e-36!61;UBERON:0000033!5.06e-34!123;UBERON:0000153!1.97e-32!129;UBERON:0007811!1.97e-32!129;UBERON:0007023!1.42e-31!115;UBERON:0000956!2.35e-31!25;UBERON:0000203!2.35e-31!25;UBERON:0002619!2.97e-27!22;UBERON:0001950!1.97e-24!20;UBERON:0003076!4.16e-17!15;UBERON:0003057!4.16e-17!15;UBERON:0000475!6.52e-15!365;UBERON:0004732!1.91e-14!13;UBERON:0004733!2.93e-13!12;UBERON:0002028!2.93e-13!12;UBERON:0007277!2.93e-13!12;UBERON:0002308!4.19e-13!9;UBERON:0000125!4.19e-13!9;UBERON:0002420!4.94e-13!9;UBERON:0007245!4.94e-13!9;UBERON:0010009!4.94e-13!9;UBERON:0010011!4.94e-13!9;UBERON:0000454!4.94e-13!9;UBERON:0000119!7.25e-11!312;UBERON:0000064!9.82e-11!219;UBERON:0000483!1.00e-10!309;UBERON:0000477!1.10e-10!286;UBERON:0009663!1.90e-10!7;UBERON:0000025!6.97e-10!194;UBERON:0002680!1.44e-09!9;UBERON:0001895!1.44e-09!9;UBERON:0010092!1.44e-09!9;UBERON:0000200!6.21e-09!6;UBERON:0002298!7.48e-09!8;UBERON:0001871!9.22e-09!7;UBERON:0004111!2.15e-08!241;UBERON:0000349!3.24e-08!5;UBERON:0000922!6.52e-08!612;UBERON:0000062!7.18e-08!511;UBERON:0001872!8.01e-08!5;UBERON:0002021!1.27e-07!5;UBERON:0000481!1.44e-07!347;UBERON:0002050!3.19e-07!605;UBERON:0005423!3.19e-07!605;UBERON:0005174!5.06e-07!5;UBERON:0001137!5.06e-07!5;UBERON:0000923!6.90e-07!604;UBERON:0005291!6.90e-07!604;UBERON:0006598!6.90e-07!604;UBERON:0002532!6.90e-07!604;UBERON:0001894!8.07e-07!7;UBERON:0006222!8.07e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;5.83e-71;34!UBERON:0002020;5.83e-71;34!UBERON:0001893;1.08e-70;34!UBERON:0002791;4.29e-70;32!UBERON:0001869;5.60e-70;32!UBERON:0002780;4.45e-63;41!UBERON:0001890;4.45e-63;41!UBERON:0000073;1.12e-61;53!UBERON:0002616;1.12e-61;53!UBERON:0000956;4.65e-60;25!UBERON:0000203;4.65e-60;25!UBERON:0002619;4.91e-52;22!UBERON:0001950;1.60e-46;20!UBERON:0000955;1.41e-41;68!UBERON:0001017;1.02e-39;75!UBERON:0001016;3.45e-34;83!UBERON:0000125;6.62e-24;9!UBERON:0002308;6.62e-24;9!UBERON:0002420;1.01e-23;9!UBERON:0007245;1.01e-23;9!UBERON:0010009;1.01e-23;9!UBERON:0010011;1.01e-23;9!UBERON:0000454;1.01e-23;9!UBERON:0004732;4.12e-23;13!UBERON:0004733;7.61e-21;12!UBERON:0002028;7.61e-21;12!UBERON:0009663;9.81e-19;7!UBERON:0002298;2.57e-16;6!UBERON:0000200;7.89e-16;6!UBERON:0000349;2.09e-14;5!UBERON:0002680;7.19e-14;9!UBERON:0001895;7.19e-14;9!UBERON:0001872;1.06e-13;5!UBERON:0001871;1.99e-13;6!UBERON:0002021;2.39e-13;5!UBERON:0007023;3.23e-13;114!UBERON:0011216;1.08e-11;132!UBERON:0000369;2.26e-11;4!UBERON:0002435;2.26e-11;4!UBERON:0000204;2.26e-11;4!UBERON:0002784;7.10e-11;4!UBERON:0001894;2.88e-09;7!UBERON:0002240;2.93e-09;3!UBERON:0005174;2.93e-09;3!UBERON:0001137;2.93e-09;3!UBERON:0005383;4.06e-09;3!UBERON:0005382;4.06e-09;3!UBERON:0001896;5.18e-09;3!UBERON:0005290;5.18e-09;3!UBERON:0000988;5.32e-09;3!UBERON:0010314;6.41e-09;132!UBERON:0001870;6.51e-09;3!UBERON:0002037;3.09e-07;6!UBERON:0001954;3.68e-07;2!UBERON:0003022;3.68e-07;2!UBERON:0002421;3.68e-07;2!UBERON:0002600;3.68e-07;2!UBERON:0002148;7.36e-07;2!UBERON:0006331;7.36e-07;2!UBERON:0009662;7.36e-07;2!UBERON:0001897;8.35e-07;2!UBERON:0010225;8.35e-07;2!UBERON:0001875;9.86e-07;2!UBERON:0006514;9.86e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.93e-118,56;UBERON:0005068,2.93e-118,56;UBERON:0006241,2.93e-118,56;UBERON:0007135,2.93e-118,56;UBERON:0000073,3.93e-110,53;UBERON:0002616,3.93e-110,53;UBERON:0001017,7.75e-108,81;UBERON:0001016,2.57e-99,89;UBERON:0000955,5.87e-93,68;UBERON:0006238,5.87e-93,68;UBERON:0002780,1.99e-89,41;UBERON:0001890,1.99e-89,41;UBERON:0003080,1.99e-89,41;UBERON:0006240,1.99e-89,41;UBERON:0003528,3.98e-83,34;UBERON:0002020,3.98e-83,34;UBERON:0001893,2.19e-82,34;UBERON:0003075,4.40e-80,82;UBERON:0007284,4.40e-80,82;UBERON:0002791,9.72e-78,32;UBERON:0001869,1.40e-77,32;UBERON:0002346,9.67e-76,86;UBERON:0010371,2.66e-60,104;UBERON:0003056,3.76e-60,61;UBERON:0000956,4.97e-60,25;UBERON:0000203,4.97e-60,25;UBERON:0010314,1.53e-52,132;UBERON:0002619,5.17e-52,22;UBERON:0001950,1.69e-46,20;UBERON:0004121,3.64e-45,171;UBERON:0000924,3.64e-45,171;UBERON:0006601,3.64e-45,171;UBERON:0007023,2.28e-42,114;UBERON:0011216,1.71e-36,223;UBERON:0003076,3.61e-28,15;UBERON:0003057,3.61e-28,15;UBERON:0000025,4.75e-25,192;UBERON:0000125,6.36e-24,9;UBERON:0002308,6.36e-24,9;UBERON:0002420,8.77e-24,9;UBERON:0007245,8.77e-24,9;UBERON:0010009,8.77e-24,9;UBERON:0010011,8.77e-24,9;UBERON:0000454,8.77e-24,9;UBERON:0004732,4.31e-23,13;UBERON:0004733,7.95e-21,12;UBERON:0002028,7.95e-21,12;UBERON:0007277,7.95e-21,12;UBERON:0004111,3.12e-19,240;UBERON:0009663,9.07e-19,7;UBERON:0002298,2.71e-16,6;UBERON:0000483,4.77e-16,306;UBERON:0000200,7.79e-16,6;UBERON:0000119,9.43e-16,309;UBERON:0000349,1.90e-14,5;UBERON:0002680,7.19e-14,9;UBERON:0001895,7.19e-14,9;UBERON:0010092,7.19e-14,9;UBERON:0001872,1.09e-13,5;UBERON:0001871,1.84e-13,6;UBERON:0002021,2.65e-13,5;UBERON:0000369,2.15e-11,4;UBERON:0002435,2.15e-11,4;UBERON:0000204,2.15e-11,4;UBERON:0010082,2.15e-11,4;UBERON:0002784,7.39e-11,4;UBERON:0002240,2.93e-09,3;UBERON:0005174,2.93e-09,3;UBERON:0001137,2.93e-09,3;UBERON:0001894,2.96e-09,7;UBERON:0006222,2.96e-09,7;UBERON:0005383,3.96e-09,3;UBERON:0005382,3.96e-09,3;UBERON:0000988,5.32e-09,3;UBERON:0001896,5.47e-09,3;UBERON:0005290,5.47e-09,3;UBERON:0010096,5.47e-09,3;UBERON:0001870,6.25e-09,3;UBERON:0000923,3.07e-08,560;UBERON:0010316,3.07e-08,560;UBERON:0005291,3.07e-08,560;UBERON:0006598,3.07e-08,560;UBERON:0010317,3.07e-08,560;UBERON:0002532,3.07e-08,560;UBERON:0002050,4.60e-08,564;UBERON:0005423,2.39e-07,581;UBERON:0002037,3.09e-07,6;UBERON:0006215,3.09e-07,6;UBERON:0001954,3.68e-07,2;UBERON:0003022,3.68e-07,2;UBERON:0002421,3.68e-07,2;UBERON:0002600,3.68e-07,2;UBERON:0000922,6.61e-07,592;UBERON:0002148,7.68e-07,2;UBERON:0006331,7.68e-07,2;UBERON:0009662,7.68e-07,2;UBERON:0001897,8.59e-07,2;UBERON:0010225,8.59e-07,2;UBERON:0001875,9.86e-07,2;UBERON:0006514,9.86e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0.495065411840187,0.331397375727916,0,0,0,0,0.738726348460727,0,2.82109249330279,19.4640471249119,11.4974517061223,18.9569385788152,0,0,0,0,0,0.309632246632152,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0.443458794925128,0.702678285545008,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0.710019185033229,0,0,0.193260853163297,0,0,0,0,0,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.811512834825538,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,9.14740647200868,2.60279707715243,1.54657762555539,2.84777651068393,5.74144876487847,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0.574072240823034,1.27463817604702,1.96686622439136,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0.818999468447914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57768678274367,0,0,0,0.296964680832639,0,8.94732882989668,17.7243464677246,0,0,13.9342769364476,0,0,6.55025144421118,0.306806047506464,0,0,0,0,0,0.0986434056369336,0,0,5.81599647657131,4.91670920257812,9.98068990005971,1.04171104434093,0,0,0,0,0,0.344743373241465,0.583209226766509,0.173624994933292,11.5146380155799,12.3008367397916,12.2065389053667,14.4858830509904,4.43321428430321,4.60709334023342,0,0,0.384751292518985,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,7.41412462787447,0,7.49646226321085,0,0,0,0,0,5.50930970934882,0.31593289814244,0,0,0,0,0,0,0,0,4.16543372004314,0,0,0,0,0,0,0,0.0969890164884194,0.264768380074501,0.677942222341597,0,0,7.59729551470544,0,0,0.213452994739353,0,0,0,3.08870996151536,0,0.248505071130865,0,0.407712618220842,0.523014231561666,0.917983958726896,0,10.8075651967762,15.8810239514712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.2664313146605,23.426985851191,0.160753148465019,0.137539436597234,0,0,0,7.41144591227901,0,0.157611414598396,0.629455057619977,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.511164065356265,2.71949019648302,0,0,16.2896525015554,12.1653993603275,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,9.74674997963685,7.80968095372564,14.1465751698345,11.4681839138014,12.756840926738,8.01043597943847,0,0,0.151649117541648,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,14.5171357959317,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0.943595651135378,0,0.33946505990805,0.425149840203366,0,0,0,0,0,0,0,7.57904856138222,4.25089728976755,17.2404567781723,7.17907274842643,11.8473697224208,6.22415272177961,9.36558744664736,8.56616521554926,0,0,0,0,0,0,0,0.150420656698515,0,0,0,1.47394725759087,0,6.21345778489231,10.9350933805939,15.70819653409,6.4684126397785,15.8622694615284,0,0,0,0,4.82131652290458,2.35398605553177,0,0.227662191351298,0,0.115233987555779,0,5.7774273030307,5.39336743215362,0,0,0,10.8409757042041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.68732060563215,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.356760272332706,0,0,0,0,0,0,0,0,21.0050059812991,10.6936704117751,10.9890489171684,0,0.187967835959707,0.193373663920732,0,0,0,0,0,0,8.60037498908708,0.946629373159108,5.03137027412769,8.29066311646717,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,13.2667110313405,13.2394234703226,0,0,0,0.186224142887574,1.00918676322552,0.0636471582781649,0,0,0,0.134704106029175,0.0717222053926763,0.332660356546013,0,0,1.9307228228694,0,0,0.733448665097199,0.813792356631477,0,0,0 | |||
|short_description=p3@NPAS3 | |||
}} |
Latest revision as of 18:07, 19 September 2015
Short description: | p3@NPAS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NPAS3_5end |
Coexpression cluster: | C1030_Astrocyte_anaplastic_Neural_parietal_hippocampus_occipital_spinal |
Association with transcript: | -428bp_to_ENST00000551492, ENST00000551634_5end |
EntrezGene: | NPAS3 |
HGNC: | 19311 |
UniProt: | F8VR32F8VS42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.43e-09 | 3 |
neuronal stem cell | 1.83e-07 | 8 |