FFCP PHASE1:Hg19::chr3:115342470..115342534,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2596 | |EntrezGene=2596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4140 | |HGNC=4140 | ||
|TSSclassifier=strong | |||
|UniProt=A8K0Y4 | |UniProt=A8K0Y4 | ||
|association_with_transcript=113bp_to_ENST00000393780_5end | |association_with_transcript=113bp_to_ENST00000393780_5end | ||
|cluster_id=chr3:115342470..115342534,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GAP43_5end | |description=CAGE_peak_2_at_GAP43_5end | ||
|id=chr3:115342470..115342534,+ | |id=chr3:115342470..115342534,+ | ||
|ontology_enrichment_celltype=CL:0002319!7.54e-09!25;CL:0000133!3.63e-08!59;CL:0000047!3.95e-08!8 | |ontology_enrichment_celltype=CL:0002319!7.54e-09!25;CL:0000133!3.63e-08!59;CL:0000047!3.95e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0002319;6.60e-09;25!CL:0000540;1.16e-08;6!CL:0000404;1.16e-08;6!CL:0002321;5.47e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.25e-11,8;CL:0002319,5.99e-09,25;CL:0000540,1.21e-08,6;CL:0000031,1.21e-08,6;CL:0000404,1.21e-08,6;CL:0000133,1.67e-08,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.66e-15;82!CL:0000031;1.16e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.19e-48!82;UBERON:0000073!2.07e-48!94;UBERON:0001016!2.07e-48!94;UBERON:0005743!1.47e-46!86;UBERON:0001049!4.70e-45!57;UBERON:0005068!4.70e-45!57;UBERON:0006241!4.70e-45!57;UBERON:0007135!4.70e-45!57;UBERON:0003075!1.13e-41!86;UBERON:0007284!1.13e-41!86;UBERON:0002346!2.40e-39!90;UBERON:0000955!1.26e-37!69;UBERON:0006238!1.26e-37!69;UBERON:0002616!7.87e-37!59;UBERON:0002780!1.78e-36!41;UBERON:0001890!1.78e-36!41;UBERON:0006240!1.78e-36!41;UBERON:0003080!3.81e-35!42;UBERON:0002020!3.17e-31!34;UBERON:0003528!3.17e-31!34;UBERON:0001893!3.23e-31!34;UBERON:0004121!1.05e-30!169;UBERON:0002791!2.87e-30!33;UBERON:0003056!3.58e-30!61;UBERON:0001869!8.86e-30!32;UBERON:0000924!1.05e-29!173;UBERON:0006601!1.05e-29!173;UBERON:0007023!8.59e-29!115;UBERON:0000033!3.49e-26!123;UBERON:0000153!1.14e-25!129;UBERON:0007811!1.14e-25!129;UBERON:0000956!6.63e-24!25;UBERON:0000203!6.63e-24!25;UBERON:0002619!6.28e-22!22;UBERON:0001950!3.21e-20!20;UBERON:0000025!1.72e-17!194;UBERON:0004111!3.78e-11!241;UBERON:0003076!7.78e-11!15;UBERON:0003057!7.78e-11!15;UBERON:0000483!2.65e-10!309;UBERON:0000477!2.68e-10!286;UBERON:0000119!3.39e-10!312;UBERON:0000922!1.32e-09!612;UBERON:0000475!1.94e-09!365;UBERON:0000481!4.20e-09!347;UBERON:0004732!5.37e-09!13;UBERON:0002420!7.13e-09!9;UBERON:0007245!7.13e-09!9;UBERON:0010009!7.13e-09!9;UBERON:0010011!7.13e-09!9;UBERON:0000454!7.13e-09!9;UBERON:0000468!1.00e-08!659;UBERON:0002308!1.03e-08!9;UBERON:0000125!1.03e-08!9;UBERON:0001871!1.50e-08!7;UBERON:0004733!1.64e-08!12;UBERON:0002028!1.64e-08!12;UBERON:0007277!1.64e-08!12;UBERON:0000064!3.23e-08!219;UBERON:0002050!1.92e-07!605;UBERON:0005423!1.92e-07!605;UBERON:0000200!3.01e-07!6;UBERON:0000923!3.20e-07!604;UBERON:0005291!3.20e-07!604;UBERON:0006598!3.20e-07!604;UBERON:0002532!3.20e-07!604;UBERON:0000467!3.58e-07!625;UBERON:0000480!4.49e-07!626;UBERON:0009663!4.96e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.82e-41;32!UBERON:0003528;1.43e-40;34!UBERON:0002020;1.43e-40;34!UBERON:0001893;1.50e-40;34!UBERON:0002791;2.08e-40;32!UBERON:0002780;2.66e-39;41!UBERON:0001890;2.66e-39;41!UBERON:0000073;8.24e-37;53!UBERON:0002616;8.24e-37;53!UBERON:0000956;6.07e-36;25!UBERON:0000203;6.07e-36;25!UBERON:0002619;7.47e-33;22!UBERON:0001950;3.16e-30;20!UBERON:0001017;4.30e-27;75!UBERON:0000955;6.58e-27;68!UBERON:0001016;6.01e-24;83!UBERON:0002420;9.59e-13;9!UBERON:0007245;9.59e-13;9!UBERON:0010009;9.59e-13;9!UBERON:0010011;9.59e-13;9!UBERON:0000454;9.59e-13;9!UBERON:0000125;1.67e-12;9!UBERON:0002308;1.67e-12;9!UBERON:0004732;2.17e-11;13!UBERON:0001871;7.44e-11;6!UBERON:0004733;1.13e-10;12!UBERON:0002028;1.13e-10;12!UBERON:0000200;2.73e-10;6!UBERON:0011216;5.73e-10;132!UBERON:0009663;6.25e-10;7!UBERON:0001894;2.13e-09;7!UBERON:0007023;3.38e-09;114!UBERON:0002298;5.42e-09;6!UBERON:0001872;1.70e-08;5!UBERON:0000349;2.11e-08;5!UBERON:0002021;3.00e-08;5!UBERON:0010314;9.42e-08;132!UBERON:0002680;2.56e-07;9!UBERON:0001895;2.56e-07;9!UBERON:0000369;7.99e-07;4!UBERON:0002435;7.99e-07;4!UBERON:0000204;7.99e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.03e-75,81;UBERON:0001016,4.87e-74,89;UBERON:0001049,1.36e-68,56;UBERON:0005068,1.36e-68,56;UBERON:0006241,1.36e-68,56;UBERON:0007135,1.36e-68,56;UBERON:0000073,1.16e-64,53;UBERON:0002616,1.16e-64,53;UBERON:0003075,2.01e-58,82;UBERON:0007284,2.01e-58,82;UBERON:0000955,3.68e-58,68;UBERON:0006238,3.68e-58,68;UBERON:0002780,3.15e-55,41;UBERON:0001890,3.15e-55,41;UBERON:0003080,3.15e-55,41;UBERON:0006240,3.15e-55,41;UBERON:0002346,1.12e-54,86;UBERON:0003528,3.89e-47,34;UBERON:0002020,3.89e-47,34;UBERON:0001893,4.00e-47,34;UBERON:0001869,6.57e-45,32;UBERON:0002791,1.90e-44,32;UBERON:0010371,2.83e-44,104;UBERON:0003056,9.14e-43,61;UBERON:0004121,6.89e-40,171;UBERON:0000924,6.89e-40,171;UBERON:0006601,6.89e-40,171;UBERON:0010314,2.19e-36,132;UBERON:0000956,7.32e-36,25;UBERON:0000203,7.32e-36,25;UBERON:0002619,8.08e-33,22;UBERON:0007023,1.50e-30,114;UBERON:0001950,3.44e-30,20;UBERON:0011216,2.47e-28,223;UBERON:0000025,3.01e-18,192;UBERON:0003076,3.16e-14,15;UBERON:0003057,3.16e-14,15;UBERON:0002420,9.10e-13,9;UBERON:0007245,9.10e-13,9;UBERON:0010009,9.10e-13,9;UBERON:0010011,9.10e-13,9;UBERON:0000454,9.10e-13,9;UBERON:0000125,1.59e-12,9;UBERON:0002308,1.59e-12,9;UBERON:0004111,1.36e-11,240;UBERON:0004732,1.78e-11,13;UBERON:0001871,7.97e-11,6;UBERON:0004733,9.90e-11,12;UBERON:0002028,9.90e-11,12;UBERON:0007277,9.90e-11,12;UBERON:0000200,2.78e-10,6;UBERON:0009663,5.94e-10,7;UBERON:0001894,2.46e-09,7;UBERON:0006222,2.46e-09,7;UBERON:0000483,4.64e-09,306;UBERON:0002298,5.55e-09,6;UBERON:0000119,8.88e-09,309;UBERON:0001872,1.69e-08,5;UBERON:0000349,2.08e-08,5;UBERON:0002021,3.01e-08,5;UBERON:0000922,4.83e-08,592;UBERON:0002680,2.24e-07,9;UBERON:0001895,2.24e-07,9;UBERON:0010092,2.24e-07,9;UBERON:0000923,2.69e-07,560;UBERON:0010316,2.69e-07,560;UBERON:0005291,2.69e-07,560;UBERON:0006598,2.69e-07,560;UBERON:0010317,2.69e-07,560;UBERON:0002532,2.69e-07,560;UBERON:0002050,4.89e-07,564;UBERON:0000369,8.00e-07,4;UBERON:0002435,8.00e-07,4;UBERON:0000204,8.00e-07,4;UBERON:0010082,8.00e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,1.26343974685366,1.30592814099919,0,0,0,0,0.495065411840187,0,0,0,0,0,1.72369481307503,0,0.940364164434263,10.8769675109802,9.71808418017478,2.00868223351684,0,0,0,0,0,2.94150634300544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63239701580021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,3.00802746381534,1.30361867064741,0.795285947051099,0.486634870302636,1.60709189178915,0.443458794925128,0.87834785693126,11.853606332543,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0.132409180813219,0,1.06400514659507,2.24271040056923,0,0.74000264525148,0.933633106199299,0.134710672069688,0,0,0,0,0,0,0.448346041655403,0.352303495931295,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0,0.150238058906597,0.226864366320042,0,0,0.423863802319124,0,0.103052529238439,0,0.18611685633159,2.53164498361899,0.876933046450788,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0,0,0,0,2.6834215348511,3.5783037446801,4.06678800043314,7.77457912615278,5.2987378683882,2.18986415445498,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.514703430895577,0,0,0,0,0,0,0,8.34698915820553,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15014803749563,0,0,0,0,0,0,0,0,5.13217338068116,0,0,0,0,0,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,3.44585807502342,4.27910715122155,0,0,0,0,0,0,0,172.530249847053,178.291599784942,66.5028378988818,132.50536587947,94.4149352446682,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.234282829985426,0.300946099727719,0,4.1389228517002,1.32845119707087,2.39679919104214,0.695068915744663,0,0,0,0,0,0,0,0,0,1.07423381301644,0,0,0,0.321707842287215,0,0.462629081407967,2.30830242907065,2.38168752440047,2.07701771673448,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,1.54673149267395,0.308097234229289,0,0.137836572484531,0,0,0.255679882248303,0.445160178233687,0,0,0,0,0.464845549297286,0,0.6970372701606,0.308033580176089,2.12922412126809,0,0.18532421910392,0.143124886741991,0,0,0,0,0,4.13664222303718,0.78494864019923,0,0,0,1.01091240786658,0,0,0,0,0,0,0,6.78048699721457,5.51365343546124,0,0.438450885253763,0,0,0.405820753925408,7.435763954394,4.7888252430481,0.286822704408103,0,0,0.709522128141196,0.633322905892992,0,1.13841952129715,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45447021248958,0,115.321127140891,99.8752856514641,0,0,0,2.19172787076177,2.21027132424918,0,1.43176155503017,0.123084805461069,0.311039587661807,0,0,0,1.08507746200627,0,0,67.8532922266653,107.425457671424,111.783726880669,0,0,0,0,0,0,12.0660180634513,0.583209226766509,6.07687482266523,15.9433449446491,67.2928127529776,22.8872604475625,72.871732294677,34.2835237986115,85.7796902872033,0,0,0.307801034015188,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29833183845255,0.995261931078505,1.59223616106011,3.66618086960175,0,0,0,13.2780231971934,0.802577647298789,51.7724425052999,0,0,0,0,1.20990716048664,119.980522559152,3.53844845919533,0,0.207376382794494,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.872901148395775,0,7.23138370497704,0.137041924646751,0,124.595646441169,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,1.35904206073614,0.523014231561666,0,1.15580235960608,6.60462317580768,9.17266038576353,0,0,0,4.18923601908381,1.3749625440701,0.717873024576814,0.199679000498991,0,0.446342914883745,0.201550417460179,0.360299883542404,0,0,0,0,0,0,52.485159527414,76.6825176408171,3.05430982083536,4.53880140770872,7.06248574649615,0,0,115.181159423615,0,0,0.262272940674991,0.105600336519406,0.179287339332845,0,1.42939065274673,0,0,0,0,0.326587360109409,1.19730191562487,0,0,0,0,0,35.2942470867033,89.7859365832865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,145.315181514586,169.860560743533,119.432147894001,12.0415931094915,19.523513070486,27.694995711857,0,0,0,0,0,0,2.8984205722165,1.04478362020812,0,0.554805861502613,0.757612021100357,1.76097531226803,0,0,2.11723293268535,5.75117642156288,0.147855149989634,0.318593534327405,0,0.776314784381297,0,1.06336685823198,0,0.450772826991655,0,2.44122439922797,0,0.751873899297419,0.928067519756987,0,0,7.21130980883865,5.05124233148879,6.30924491143255,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,108.809389251412,0,0,0,0,0,0,0,0,5.16644938982447,0,0.368211900503681,0,13.0636224606924,5.88314107996798,33.533516344368,0,5.78811082417674,0,0,0.123935764259002,0,0.636008701306837,0,35.2251129245607,1.41070377476274,0,89.9851443601398,58.0955962934898,43.4204096635451,83.2772438817465,136.370787655949,56.0173744960165,104.63621836944,1.42769420259154,0,0,0,0,0,0,0.397832444232549,0,0,0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| ||
|short_description=p2@GAP43 | |short_description=p2@GAP43 | ||
}} | }} |
Latest revision as of 17:57, 19 September 2015
Short description: | p2@GAP43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GAP43_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 113bp_to_ENST00000393780_5end |
EntrezGene: | GAP43 |
HGNC: | 4140 |
UniProt: | A8K0Y4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.25e-11 | 8 |
neural cell | 5.99e-09 | 25 |
neuron | 1.21e-08 | 6 |
neuroblast | 1.21e-08 | 6 |
electrically signaling cell | 1.21e-08 | 6 |
neurectodermal cell | 1.67e-08 | 59 |