FFCP PHASE1:Hg19::chr19:531713..531748,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:531713..531748,+
|short_description=p1@CDC34
|description=CAGE_peak_1_at_CDC34_5end
|association_with_transcript=0bp_to_ENST00000215574,NM_004359,uc002lov...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=997 | |EntrezGene=997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1734 | |HGNC=1734 | ||
|TSSclassifier=strong | |||
|UniProt=P49427 | |UniProt=P49427 | ||
|association_with_transcript=0bp_to_ENST00000215574,NM_004359,uc002lov.2_5end | |||
|cluster_id=chr19:531713..531748,+ | |||
|description=CAGE_peak_1_at_CDC34_5end | |||
|id=chr19:531713..531748,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.23e-23!248;CL:0000220!5.54e-23!246;CL:0000222!1.04e-14!119;CL:0000183!5.63e-11!59;CL:0000066!6.70e-10!254;CL:0002078!6.80e-10!44;CL:0000115!9.35e-10!35;CL:0000192!2.28e-09!42;CL:0000514!2.28e-09!42;CL:0000393!3.00e-09!60;CL:0000211!3.00e-09!60;CL:0002139!4.80e-09!24;CL:0000071!6.05e-09!18;CL:0002546!6.05e-09!18;CL:0000187!7.76e-09!54;CL:0000359!9.41e-09!32;CL:1000449!1.18e-08!16;CL:0000680!2.32e-08!57;CL:0000056!2.32e-08!57;CL:0000355!2.32e-08!57;CL:0000055!1.81e-07!180;CL:0002681!4.12e-07!13;CL:0002584!4.12e-07!13;CL:1000507!9.09e-07!12;CL:1000494!9.09e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.30e-09;24!CL:0000071;4.93e-09;18!CL:0000115;9.86e-09;36!CL:1000449;1.41e-08;15!CL:0000359;3.36e-08;32!CL:0002078;3.08e-07;45!CL:0000192;3.95e-07;43!CL:0002681;4.95e-07;12!CL:0002584;4.95e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.26e-24,250;CL:0000222,3.18e-15,121;CL:0002078,2.90e-10,45;CL:0000115,3.87e-10,36;CL:0000066,9.18e-10,253;CL:0000192,1.61e-09,43;CL:0000514,1.61e-09,43;CL:0000393,2.10e-09,61;CL:0000211,2.10e-09,61;CL:0002139,4.80e-09,24;CL:0000187,5.44e-09,55;CL:0000071,6.05e-09,18;CL:0002546,6.05e-09,18;CL:0000359,9.41e-09,32;CL:1000449,1.36e-08,15;CL:0000680,1.63e-08,58;CL:0000056,1.63e-08,58;CL:0000355,1.63e-08,58;CL:0002681,4.78e-07,12;CL:0002584,4.78e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;4.93e-09;18!CL:0000514;3.95e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006554;3.07e-09;30!UBERON:0001008;3.07e-09;30!UBERON:0003914;3.61e-09;74!UBERON:0004638;4.93e-09;18!UBERON:0001986;4.93e-09;18!UBERON:0004852;4.93e-09;18!UBERON:0006555;1.41e-08;15!UBERON:0004819;1.41e-08;15!UBERON:0001285;1.41e-08;15!UBERON:0007684;1.41e-08;15!UBERON:0000490;2.57e-08;33!UBERON:0007500;2.96e-08;56!UBERON:0001981;2.96e-08;56!UBERON:0004537;2.96e-08;56!UBERON:0000487;8.20e-08;22!UBERON:0001637;1.17e-07;42!UBERON:0003509;1.17e-07;42!UBERON:0004572;1.17e-07;42!UBERON:0000353;1.83e-07;15!UBERON:0001225;4.95e-07;12!UBERON:0008987;4.95e-07;12!UBERON:0000055;5.67e-07;65!UBERON:0002113;6.19e-07;24!UBERON:0011143;6.19e-07;24!UBERON:0006914;6.44e-07;25 | |||
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| ||
|short_description=p1@CDC34 | |||
}} | }} |
Latest revision as of 17:50, 19 September 2015
Short description: | p1@CDC34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDC34_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000215574, NM_004359, uc002lov.2_5end |
EntrezGene: | CDC34 |
HGNC: | 1734 |
UniProt: | P49427 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.26e-24 | 250 |
mesodermal cell | 3.18e-15 | 121 |
meso-epithelial cell | 2.90e-10 | 45 |
endothelial cell | 3.87e-10 | 36 |
epithelial cell | 9.18e-10 | 253 |
smooth muscle cell | 1.61e-09 | 43 |
smooth muscle myoblast | 1.61e-09 | 43 |
electrically responsive cell | 2.10e-09 | 61 |
electrically active cell | 2.10e-09 | 61 |
endothelial cell of vascular tree | 4.80e-09 | 24 |
muscle cell | 5.44e-09 | 55 |
blood vessel endothelial cell | 6.05e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.05e-09 | 18 |
vascular associated smooth muscle cell | 9.41e-09 | 32 |
epithelial cell of nephron | 1.36e-08 | 15 |
muscle precursor cell | 1.63e-08 | 58 |
myoblast | 1.63e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.63e-08 | 58 |
kidney cortical cell | 4.78e-07 | 12 |
renal cortical epithelial cell | 4.78e-07 | 12 |