FFCP PHASE1:Hg19::chrX:136648643..136648711,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7547 | |EntrezGene=7547 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12874 | |HGNC=12874 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JY75 | |UniProt=Q5JY75 | ||
|association_with_transcript=0bp_to_ENST00000370606_5end | |association_with_transcript=0bp_to_ENST00000370606_5end | ||
|cluster_id=chrX:136648643..136648711,+ | |||
|coexpression_cluster_id=C595 | |||
|description=CAGE_peak_2_at_ZIC3_5end | |description=CAGE_peak_2_at_ZIC3_5end | ||
|id=chrX:136648643..136648711,+ | |id=chrX:136648643..136648711,+ | ||
|ontology_enrichment_celltype=CL:0000133!7.81e-12!59;CL:0002322!4.79e-11!5;CL:0000128!5.40e-09!7;CL:0000126!5.40e-09!7;CL:0000127!5.40e-09!7;CL:0002453!5.40e-09!7;CL:0002319!7.87e-09!25;CL:0000221!8.52e-09!71;CL:0000047!1.82e-08!8;CL:0000039!2.24e-07!7;CL:0000586!2.24e-07!7;CL:0000064!5.89e-07!3;CL:0005012!5.89e-07!3;CL:0000067!5.89e-07!3;CL:0002304!5.89e-07!3;CL:0002603!6.37e-07!3 | |ontology_enrichment_celltype=CL:0000133!7.81e-12!59;CL:0002322!4.79e-11!5;CL:0000128!5.40e-09!7;CL:0000126!5.40e-09!7;CL:0000127!5.40e-09!7;CL:0002453!5.40e-09!7;CL:0002319!7.87e-09!25;CL:0000221!8.52e-09!71;CL:0000047!1.82e-08!8;CL:0000039!2.24e-07!7;CL:0000586!2.24e-07!7;CL:0000064!5.89e-07!3;CL:0005012!5.89e-07!3;CL:0000067!5.89e-07!3;CL:0002304!5.89e-07!3;CL:0002603!6.37e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.87e-16;5!CL:0000039;4.79e-11;7!CL:0000586;4.79e-11;7!CL:0000064;6.55e-10;3!CL:0000067;6.55e-10;3!CL:0005012;6.55e-10;3!CL:0002304;6.55e-10;3!CL:0002603;7.16e-10;3!CL:0002321;1.46e-09;15!CL:0000708;2.60e-09;3!CL:0000346;3.22e-09;3!CL:1000428;3.22e-09;3!CL:0002319;6.47e-09;25!CL:0000540;3.53e-08;6!CL:0000404;3.53e-08;6!CL:0000075;1.51e-07;27!CL:0000306;3.65e-07;4!CL:0002222;3.65e-07;4!CL:0002224;3.65e-07;4!CL:0002549;7.14e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.97e-16,5;CL:0000133,3.50e-16,59;CL:0000047,1.12e-12,8;CL:0000221,2.24e-12,72;CL:0000039,5.50e-11,7;CL:0000586,5.50e-11,7;CL:0000064,6.28e-10,3;CL:0000067,6.28e-10,3;CL:0005012,6.28e-10,3;CL:0002304,6.28e-10,3;CL:0002603,7.07e-10,3;CL:0000708,2.42e-09,3;CL:0000346,2.88e-09,3;CL:1000428,2.88e-09,3;CL:0002319,6.54e-09,25;CL:0000540,4.23e-08,6;CL:0000031,4.23e-08,6;CL:0000404,4.23e-08,6;CL:0000075,1.45e-07,27;CL:0000333,1.71e-07,41;CL:0000306,3.35e-07,4;CL:0002222,3.35e-07,4;CL:0002224,3.35e-07,4;CL:0002549,6.84e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.75e-10;3!CL:0000031;3.53e-08;6!UBERON:0009117;6.00e-08;10!UBERON:0005564;6.00e-08;10!CL:0000133;1.72e-07;59 | |||
|ontology_enrichment_disease=DOID:3095!3.12e-09!22;DOID:2994!3.12e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.46e-15;22!DOID:2994;5.46e-15;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.09e-15,22;DOID:2994,6.09e-15,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.15e-62!82;UBERON:0005743!1.11e-60!86;UBERON:0000073!2.07e-60!94;UBERON:0001016!2.07e-60!94;UBERON:0001049!3.04e-53!57;UBERON:0005068!3.04e-53!57;UBERON:0006241!3.04e-53!57;UBERON:0007135!3.04e-53!57;UBERON:0002616!2.26e-51!59;UBERON:0003075!1.57e-50!86;UBERON:0007284!1.57e-50!86;UBERON:0002346!1.02e-49!90;UBERON:0000955!1.30e-47!69;UBERON:0006238!1.30e-47!69;UBERON:0000924!7.52e-41!173;UBERON:0006601!7.52e-41!173;UBERON:0004121!8.98e-41!169;UBERON:0003056!2.65e-35!61;UBERON:0000033!2.28e-34!123;UBERON:0002780!4.40e-34!41;UBERON:0001890!4.40e-34!41;UBERON:0006240!4.40e-34!41;UBERON:0003080!4.67e-33!42;UBERON:0000153!5.44e-32!129;UBERON:0007811!5.44e-32!129;UBERON:0002020!1.19e-27!34;UBERON:0003528!1.19e-27!34;UBERON:0001893!1.27e-27!34;UBERON:0002791!2.74e-26!33;UBERON:0001869!6.11e-25!32;UBERON:0003076!9.72e-22!15;UBERON:0003057!9.72e-22!15;UBERON:0000956!7.92e-21!25;UBERON:0000203!7.92e-21!25;UBERON:0004732!4.05e-19!13;UBERON:0007023!4.92e-18!115;UBERON:0004733!1.77e-17!12;UBERON:0002028!1.77e-17!12;UBERON:0007277!1.77e-17!12;UBERON:0002619!3.10e-17!22;UBERON:0001950!5.44e-17!20;UBERON:0002680!1.93e-16!9;UBERON:0001895!1.93e-16!9;UBERON:0010092!1.93e-16!9;UBERON:0002037!3.37e-12!6;UBERON:0006215!3.37e-12!6;UBERON:0000119!2.36e-11!312;UBERON:0000483!8.49e-10!309;UBERON:0000064!4.58e-09!219;UBERON:0000488!1.16e-08!4;UBERON:0001872!2.19e-08!5;UBERON:0002308!3.09e-08!9;UBERON:0000125!3.09e-08!9;UBERON:0007625!3.50e-08!11;UBERON:0002200!4.95e-08!11;UBERON:0006876!4.95e-08!11;UBERON:0001894!7.41e-08!7;UBERON:0006222!7.41e-08!7;UBERON:0002298!1.49e-07!8;UBERON:0000025!2.19e-07!194;UBERON:0002067!3.38e-07!9;UBERON:0004016!3.38e-07!9;UBERON:0010083!3.38e-07!9;UBERON:0002104!3.61e-07!21;UBERON:0000475!4.21e-07!365;UBERON:0001778!5.89e-07!3;UBERON:0001775!5.89e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004732;1.22e-20;13!UBERON:0002680;6.18e-20;9!UBERON:0001895;6.18e-20;9!UBERON:0004733;3.22e-18;12!UBERON:0002028;3.22e-18;12!UBERON:0002037;4.68e-18;6!UBERON:0000488;1.48e-12;4!UBERON:0007625;1.73e-12;11!UBERON:0006876;2.46e-12;11!UBERON:0001016;6.37e-12;83!UBERON:0002067;1.22e-10;9!UBERON:0001778;6.55e-10;3!UBERON:0001775;6.55e-10;3!UBERON:0000073;1.28e-09;53!UBERON:0002616;1.28e-09;53!UBERON:0001801;1.42e-09;14!UBERON:0003210;2.60e-09;3!UBERON:0000412;3.22e-09;3!UBERON:0001992;3.22e-09;3!UBERON:0001017;6.37e-09;75!UBERON:0002203;2.33e-08;6!UBERON:0001768;2.33e-08;6!UBERON:0002200;2.33e-08;6!UBERON:0002104;8.42e-08;21!UBERON:0000922;2.24e-07;49!UBERON:0010371;2.99e-07;31!UBERON:0010077;3.65e-07;4!UBERON:0005389;3.65e-07;4!UBERON:0000484;3.65e-07;4!UBERON:0000965;3.65e-07;4!UBERON:0001803;3.65e-07;4!UBERON:0005629;7.14e-07;2!UBERON:0005358;7.14e-07;2!UBERON:0001886;7.14e-07;2!UBERON:0004086;7.14e-07;2!UBERON:0005282;7.14e-07;2!UBERON:0005281;7.14e-07;2!UBERON:0000019;9.09e-07;19!UBERON:0000047;9.09e-07;19!UBERON:0004088;9.09e-07;19!UBERON:0010230;9.09e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.09e-30,89;UBERON:0001017,6.18e-28,81;UBERON:0004121,1.87e-24,171;UBERON:0000924,1.87e-24,171;UBERON:0006601,1.87e-24,171;UBERON:0002346,5.43e-23,86;UBERON:0003075,1.17e-22,82;UBERON:0007284,1.17e-22,82;UBERON:0003076,3.26e-21,15;UBERON:0003057,3.26e-21,15;UBERON:0004732,8.48e-21,13;UBERON:0010371,1.30e-20,104;UBERON:0002680,5.20e-20,9;UBERON:0001895,5.20e-20,9;UBERON:0010092,5.20e-20,9;UBERON:0004733,2.19e-18,12;UBERON:0002028,2.19e-18,12;UBERON:0007277,2.19e-18,12;UBERON:0010314,4.11e-18,132;UBERON:0002037,4.84e-18,6;UBERON:0006215,4.84e-18,6;UBERON:0001049,8.99e-18,56;UBERON:0005068,8.99e-18,56;UBERON:0006241,8.99e-18,56;UBERON:0007135,8.99e-18,56;UBERON:0000955,1.53e-16,68;UBERON:0006238,1.53e-16,68;UBERON:0000073,2.03e-15,53;UBERON:0002616,2.03e-15,53;UBERON:0000488,1.46e-12,4;UBERON:0007625,1.60e-12,11;UBERON:0006876,2.77e-12,11;UBERON:0003056,2.09e-11,61;UBERON:0002067,7.73e-11,9;UBERON:0004016,7.73e-11,9;UBERON:0010083,7.73e-11,9;UBERON:0001778,6.28e-10,3;UBERON:0001775,6.28e-10,3;UBERON:0001801,1.34e-09,14;UBERON:0003210,2.42e-09,3;UBERON:0000412,2.88e-09,3;UBERON:0001992,2.88e-09,3;UBERON:0005085,3.31e-09,31;UBERON:0002203,2.31e-08,6;UBERON:0001768,2.31e-08,6;UBERON:0002200,2.31e-08,6;UBERON:0000019,2.83e-08,20;UBERON:0000047,2.83e-08,20;UBERON:0010312,2.83e-08,20;UBERON:0004088,2.83e-08,20;UBERON:0010230,2.83e-08,20;UBERON:0003072,2.83e-08,20;UBERON:0004128,2.83e-08,20;UBERON:0003071,2.83e-08,20;UBERON:0000970,8.19e-08,21;UBERON:0002104,8.19e-08,21;UBERON:0011216,1.27e-07,223;UBERON:0001456,2.15e-07,22;UBERON:0010077,3.35e-07,4;UBERON:0005389,3.35e-07,4;UBERON:0000484,3.35e-07,4;UBERON:0002546,3.35e-07,4;UBERON:0000965,3.35e-07,4;UBERON:0001803,3.35e-07,4;UBERON:0003073,3.35e-07,4;UBERON:0005426,3.35e-07,4;UBERON:0005629,6.84e-07,2;UBERON:0005358,6.84e-07,2;UBERON:0001886,6.84e-07,2;UBERON:0004086,6.84e-07,2;UBERON:0005282,6.84e-07,2;UBERON:0005281,6.84e-07,2 | |||
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| ||
|short_description=p2@ZIC3 | |short_description=p2@ZIC3 | ||
}} | }} |
Latest revision as of 15:50, 19 September 2015
Short description: | p2@ZIC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZIC3_5end |
Coexpression cluster: | C595_teratocarcinoma_HES3GFP_H9_testicular_Wilms_hepatoblastoma_neuroblastoma |
Association with transcript: | 0bp_to_ENST00000370606_5end |
EntrezGene: | ZIC3 |
HGNC: | 12874 |
UniProt: | Q5JY75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.97e-16 | 5 |
neurectodermal cell | 3.50e-16 | 59 |
neuronal stem cell | 1.12e-12 | 8 |
ectodermal cell | 2.24e-12 | 72 |
germ line cell | 5.50e-11 | 7 |
germ cell | 5.50e-11 | 7 |
ciliated cell | 6.28e-10 | 3 |
ciliated epithelial cell | 6.28e-10 | 3 |
multi-ciliated epithelial cell | 6.28e-10 | 3 |
non-pigmented ciliary epithelial cell | 6.28e-10 | 3 |
astrocyte of the cerebellum | 7.07e-10 | 3 |
leptomeningeal cell | 2.42e-09 | 3 |
hair follicle dermal papilla cell | 2.88e-09 | 3 |
stem cell of epidermis | 2.88e-09 | 3 |
neural cell | 6.54e-09 | 25 |
neuron | 4.23e-08 | 6 |
neuroblast | 4.23e-08 | 6 |
electrically signaling cell | 4.23e-08 | 6 |
columnar/cuboidal epithelial cell | 1.45e-07 | 27 |
migratory neural crest cell | 1.71e-07 | 41 |
crystallin accumulating cell | 3.35e-07 | 4 |
vertebrate lens cell | 3.35e-07 | 4 |
lens epithelial cell | 3.35e-07 | 4 |
fibroblast of choroid plexus | 6.84e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.09e-15 | 22 |
germ cell cancer | 6.09e-15 | 22 |