FFCP PHASE1:Hg19::chr3:113251680..113251729,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54847 | |EntrezGene=54847 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25967 | |HGNC=25967 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=278bp_to_ENST00000491730_5end | |association_with_transcript=278bp_to_ENST00000491730_5end | ||
|cluster_id=chr3:113251680..113251729,+ | |||
|description=CAGE_peak_2_at_SIDT1_5end | |description=CAGE_peak_2_at_SIDT1_5end | ||
|id=chr3:113251680..113251729,+ | |id=chr3:113251680..113251729,+ | ||
|ontology_enrichment_celltype=CL:0000542!3.20e-31!53;CL:0000051!3.20e-31!53;CL:0000838!1.03e-30!52;CL:0000084!1.10e-15!25;CL:0000827!1.10e-15!25;CL:0000791!2.77e-15!18;CL:0000789!2.77e-15!18;CL:0002420!2.77e-15!18;CL:0002419!2.77e-15!18;CL:0000790!2.77e-15!18;CL:0000945!1.86e-13!24;CL:0000826!1.86e-13!24;CL:0000236!1.77e-10!14;CL:0002087!3.39e-10!119;CL:0000625!7.79e-10!11;CL:0000738!2.23e-09!140;CL:0000037!1.36e-07!172;CL:0000566!1.36e-07!172;CL:0002031!2.43e-07!124;CL:0000988!7.01e-07!182 | |ontology_enrichment_celltype=CL:0000542!3.20e-31!53;CL:0000051!3.20e-31!53;CL:0000838!1.03e-30!52;CL:0000084!1.10e-15!25;CL:0000827!1.10e-15!25;CL:0000791!2.77e-15!18;CL:0000789!2.77e-15!18;CL:0002420!2.77e-15!18;CL:0002419!2.77e-15!18;CL:0000790!2.77e-15!18;CL:0000945!1.86e-13!24;CL:0000826!1.86e-13!24;CL:0000236!1.77e-10!14;CL:0002087!3.39e-10!119;CL:0000625!7.79e-10!11;CL:0000738!2.23e-09!140;CL:0000037!1.36e-07!172;CL:0000566!1.36e-07!172;CL:0002031!2.43e-07!124;CL:0000988!7.01e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.70e-21;18!CL:0000789;4.70e-21;18!CL:0002419;4.70e-21;18!CL:0000542;3.00e-17;53!CL:0000084;4.53e-15;25!CL:0000945;2.49e-13;24!CL:0000625;3.27e-13;11!CL:0000236;9.24e-09;13!CL:0000624;4.49e-08;6 | |ontology_enrichment_celltype_v019=CL:0000791;4.70e-21;18!CL:0000789;4.70e-21;18!CL:0002419;4.70e-21;18!CL:0000542;3.00e-17;53!CL:0000084;4.53e-15;25!CL:0000945;2.49e-13;24!CL:0000625;3.27e-13;11!CL:0000236;9.24e-09;13!CL:0000624;4.49e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.45e-32,53;CL:0000051,3.45e-32,53;CL:0000838,1.84e-31,52;CL:0000791,1.23e-21,18;CL:0000789,1.23e-21,18;CL:0002420,1.23e-21,18;CL:0002419,1.23e-21,18;CL:0000790,1.23e-21,18;CL:0000084,1.89e-15,25;CL:0000827,1.89e-15,25;CL:0000625,1.17e-13,11;CL:0000945,1.63e-13,24;CL:0000826,1.63e-13,24;CL:0002087,1.40e-10,115;CL:0000738,1.79e-10,136;CL:0000236,9.23e-10,14;CL:0000624,3.44e-08,6;CL:0000037,9.15e-08,168;CL:0002031,2.56e-07,120;CL:0000988,3.86e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;4.70e-21;18!CL:0000051;3.00e-17;53!UBERON:0006601;8.02e-07;82 | |ontology_enrichment_development_v019=CL:0000790;4.70e-21;18!CL:0000051;3.00e-17;53!UBERON:0006601;8.02e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;2.44e-07;4!DOID:1612;2.44e-07;4 | |ontology_enrichment_disease_v019=DOID:5093;2.44e-07;4!DOID:1612;2.44e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,2.05e-07,4;DOID:1612,2.05e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.18e-37!115;UBERON:0001049!1.21e-28!57;UBERON:0005068!1.21e-28!57;UBERON:0006241!1.21e-28!57;UBERON:0007135!1.21e-28!57;UBERON:0002616!1.04e-22!59;UBERON:0003080!4.37e-22!42;UBERON:0002780!1.76e-21!41;UBERON:0001890!1.76e-21!41;UBERON:0006240!1.76e-21!41;UBERON:0000955!2.40e-19!69;UBERON:0006238!2.40e-19!69;UBERON:0001017!9.83e-19!82;UBERON:0001893!1.41e-18!34;UBERON:0002020!2.15e-18!34;UBERON:0003528!2.15e-18!34;UBERON:0002791!7.40e-18!33;UBERON:0005743!1.15e-17!86;UBERON:0002619!1.63e-17!22;UBERON:0001869!1.82e-17!32;UBERON:0003075!3.32e-16!86;UBERON:0007284!3.32e-16!86;UBERON:0001950!5.98e-16!20;UBERON:0000073!9.31e-15!94;UBERON:0001016!9.31e-15!94;UBERON:0002346!1.17e-14!90;UBERON:0000956!1.98e-14!25;UBERON:0000203!1.98e-14!25;UBERON:0003056!3.02e-12!61;UBERON:0000153!9.51e-10!129;UBERON:0007811!9.51e-10!129;UBERON:0000033!9.90e-08!123;UBERON:0003076!1.03e-07!15;UBERON:0003057!1.03e-07!15;UBERON:0001871!9.36e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!1.18e-37!115;UBERON:0001049!1.21e-28!57;UBERON:0005068!1.21e-28!57;UBERON:0006241!1.21e-28!57;UBERON:0007135!1.21e-28!57;UBERON:0002616!1.04e-22!59;UBERON:0003080!4.37e-22!42;UBERON:0002780!1.76e-21!41;UBERON:0001890!1.76e-21!41;UBERON:0006240!1.76e-21!41;UBERON:0000955!2.40e-19!69;UBERON:0006238!2.40e-19!69;UBERON:0001017!9.83e-19!82;UBERON:0001893!1.41e-18!34;UBERON:0002020!2.15e-18!34;UBERON:0003528!2.15e-18!34;UBERON:0002791!7.40e-18!33;UBERON:0005743!1.15e-17!86;UBERON:0002619!1.63e-17!22;UBERON:0001869!1.82e-17!32;UBERON:0003075!3.32e-16!86;UBERON:0007284!3.32e-16!86;UBERON:0001950!5.98e-16!20;UBERON:0000073!9.31e-15!94;UBERON:0001016!9.31e-15!94;UBERON:0002346!1.17e-14!90;UBERON:0000956!1.98e-14!25;UBERON:0000203!1.98e-14!25;UBERON:0003056!3.02e-12!61;UBERON:0000153!9.51e-10!129;UBERON:0007811!9.51e-10!129;UBERON:0000033!9.90e-08!123;UBERON:0003076!1.03e-07!15;UBERON:0003057!1.03e-07!15;UBERON:0001871!9.36e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.94e-23;22!UBERON:0001950;4.27e-21;20!UBERON:0000956;6.83e-20;25!UBERON:0000203;6.83e-20;25!UBERON:0000073;2.27e-16;53!UBERON:0002616;2.27e-16;53!UBERON:0001869;1.00e-15;32!UBERON:0001893;2.58e-15;34!UBERON:0003528;4.09e-15;34!UBERON:0002020;4.09e-15;34!UBERON:0002780;4.83e-15;41!UBERON:0001890;4.83e-15;41!UBERON:0002791;5.24e-14;32!UBERON:0001017;2.50e-09;75!UBERON:0000955;6.06e-09;68!UBERON:0004733;2.47e-08;12!UBERON:0002028;2.47e-08;12!UBERON:0000178;3.13e-08;15!UBERON:0000179;3.13e-08;15!UBERON:0000463;3.13e-08;15!UBERON:0000200;5.80e-08;6!UBERON:0002390;6.46e-08;32!UBERON:0001016;7.00e-08;83!UBERON:0002298;1.29e-07;6!UBERON:0007023;1.51e-07;114!UBERON:0004732;1.59e-07;13!UBERON:0000349;3.58e-07;5!UBERON:0002021;7.41e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002619;1.94e-23;22!UBERON:0001950;4.27e-21;20!UBERON:0000956;6.83e-20;25!UBERON:0000203;6.83e-20;25!UBERON:0000073;2.27e-16;53!UBERON:0002616;2.27e-16;53!UBERON:0001869;1.00e-15;32!UBERON:0001893;2.58e-15;34!UBERON:0003528;4.09e-15;34!UBERON:0002020;4.09e-15;34!UBERON:0002780;4.83e-15;41!UBERON:0001890;4.83e-15;41!UBERON:0002791;5.24e-14;32!UBERON:0001017;2.50e-09;75!UBERON:0000955;6.06e-09;68!UBERON:0004733;2.47e-08;12!UBERON:0002028;2.47e-08;12!UBERON:0000178;3.13e-08;15!UBERON:0000179;3.13e-08;15!UBERON:0000463;3.13e-08;15!UBERON:0000200;5.80e-08;6!UBERON:0002390;6.46e-08;32!UBERON:0001016;7.00e-08;83!UBERON:0002298;1.29e-07;6!UBERON:0007023;1.51e-07;114!UBERON:0004732;1.59e-07;13!UBERON:0000349;3.58e-07;5!UBERON:0002021;7.41e-07;5 | ||
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|short_description=p2@SIDT1 | |short_description=p2@SIDT1 | ||
}} | }} |
Latest revision as of 15:41, 19 September 2015
Short description: | p2@SIDT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SIDT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 278bp_to_ENST00000491730_5end |
EntrezGene: | SIDT1 |
HGNC: | 25967 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.45e-32 | 53 |
common lymphoid progenitor | 3.45e-32 | 53 |
lymphoid lineage restricted progenitor cell | 1.84e-31 | 52 |
mature alpha-beta T cell | 1.23e-21 | 18 |
alpha-beta T cell | 1.23e-21 | 18 |
immature T cell | 1.23e-21 | 18 |
mature T cell | 1.23e-21 | 18 |
immature alpha-beta T cell | 1.23e-21 | 18 |
T cell | 1.89e-15 | 25 |
pro-T cell | 1.89e-15 | 25 |
CD8-positive, alpha-beta T cell | 1.17e-13 | 11 |
lymphocyte of B lineage | 1.63e-13 | 24 |
pro-B cell | 1.63e-13 | 24 |
nongranular leukocyte | 1.40e-10 | 115 |
leukocyte | 1.79e-10 | 136 |
B cell | 9.23e-10 | 14 |
CD4-positive, alpha-beta T cell | 3.44e-08 | 6 |
hematopoietic stem cell | 9.15e-08 | 168 |
hematopoietic lineage restricted progenitor cell | 2.56e-07 | 120 |
hematopoietic cell | 3.86e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.05e-07 | 4 |
breast cancer | 2.05e-07 | 4 |