FFCP PHASE1:Hg19::chr1:19991329..19991343,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3362 | |EntrezGene=3362 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5301 | |HGNC=5301 | ||
|TSSclassifier=strong | |||
|UniProt=P50406 | |UniProt=P50406 | ||
|association_with_transcript=-436bp_to_ENST00000289753,NM_000871,uc001bcl.2_5end | |association_with_transcript=-436bp_to_ENST00000289753,NM_000871,uc001bcl.2_5end | ||
|cluster_id=chr1:19991329..19991343,+ | |||
|description=CAGE_peak_2_at_HTR6_5end | |description=CAGE_peak_2_at_HTR6_5end | ||
|id=chr1:19991329..19991343,+ | |id=chr1:19991329..19991343,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.03e-07!5 | |ontology_enrichment_celltype=CL:0002322!1.03e-07!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.33e-23;2!UBERON:0006601;9.63e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;8.84e-13;1!DOID:74;5.11e-07;2!DOID:3193;8.76e-07;2!DOID:962;8.76e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,8.85e-13,1;DOID:74,5.11e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001893!2.40e-36!34;UBERON:0001869!6.43e-36!32;UBERON:0002780!1.30e-34!41;UBERON:0001890!1.30e-34!41;UBERON:0006240!1.30e-34!41;UBERON:0002791!1.78e-34!33;UBERON:0003080!1.28e-33!42;UBERON:0002020!2.14e-33!34;UBERON:0003528!2.14e-33!34;UBERON:0001049!3.77e-31!57;UBERON:0005068!3.77e-31!57;UBERON:0006241!3.77e-31!57;UBERON:0007135!3.77e-31!57;UBERON:0002616!8.25e-30!59;UBERON:0000955!1.03e-27!69;UBERON:0006238!1.03e-27!69;UBERON:0001017!7.24e-27!82;UBERON:0005743!3.51e-25!86;UBERON:0002619!3.84e-25!22;UBERON:0000073!5.23e-25!94;UBERON:0001016!5.23e-25!94;UBERON:0001950!1.86e-24!20;UBERON:0003056!1.00e-22!61;UBERON:0002346!2.50e-22!90;UBERON:0003075!2.65e-22!86;UBERON:0007284!2.65e-22!86;UBERON:0000956!1.04e-21!25;UBERON:0000203!1.04e-21!25;UBERON:0007023!4.40e-18!115;UBERON:0002420!7.89e-18!9;UBERON:0007245!7.89e-18!9;UBERON:0010009!7.89e-18!9;UBERON:0010011!7.89e-18!9;UBERON:0000454!7.89e-18!9;UBERON:0000033!8.52e-15!123;UBERON:0000153!1.10e-13!129;UBERON:0007811!1.10e-13!129;UBERON:0002308!1.55e-13!9;UBERON:0000125!1.55e-13!9;UBERON:0009663!1.73e-13!7;UBERON:0000924!2.35e-12!173;UBERON:0006601!2.35e-12!173;UBERON:0004121!4.44e-12!169;UBERON:0000369!1.30e-11!4;UBERON:0002435!1.30e-11!4;UBERON:0000204!1.30e-11!4;UBERON:0010082!1.30e-11!4;UBERON:0001871!2.45e-11!7;UBERON:0000200!1.12e-10!6;UBERON:0005383!3.69e-09!3;UBERON:0005382!3.69e-09!3;UBERON:0002771!1.11e-08!3;UBERON:0000349!1.44e-08!5;UBERON:0001872!1.61e-08!5 | |ontology_enrichment_uberon=UBERON:0001893!2.40e-36!34;UBERON:0001869!6.43e-36!32;UBERON:0002780!1.30e-34!41;UBERON:0001890!1.30e-34!41;UBERON:0006240!1.30e-34!41;UBERON:0002791!1.78e-34!33;UBERON:0003080!1.28e-33!42;UBERON:0002020!2.14e-33!34;UBERON:0003528!2.14e-33!34;UBERON:0001049!3.77e-31!57;UBERON:0005068!3.77e-31!57;UBERON:0006241!3.77e-31!57;UBERON:0007135!3.77e-31!57;UBERON:0002616!8.25e-30!59;UBERON:0000955!1.03e-27!69;UBERON:0006238!1.03e-27!69;UBERON:0001017!7.24e-27!82;UBERON:0005743!3.51e-25!86;UBERON:0002619!3.84e-25!22;UBERON:0000073!5.23e-25!94;UBERON:0001016!5.23e-25!94;UBERON:0001950!1.86e-24!20;UBERON:0003056!1.00e-22!61;UBERON:0002346!2.50e-22!90;UBERON:0003075!2.65e-22!86;UBERON:0007284!2.65e-22!86;UBERON:0000956!1.04e-21!25;UBERON:0000203!1.04e-21!25;UBERON:0007023!4.40e-18!115;UBERON:0002420!7.89e-18!9;UBERON:0007245!7.89e-18!9;UBERON:0010009!7.89e-18!9;UBERON:0010011!7.89e-18!9;UBERON:0000454!7.89e-18!9;UBERON:0000033!8.52e-15!123;UBERON:0000153!1.10e-13!129;UBERON:0007811!1.10e-13!129;UBERON:0002308!1.55e-13!9;UBERON:0000125!1.55e-13!9;UBERON:0009663!1.73e-13!7;UBERON:0000924!2.35e-12!173;UBERON:0006601!2.35e-12!173;UBERON:0004121!4.44e-12!169;UBERON:0000369!1.30e-11!4;UBERON:0002435!1.30e-11!4;UBERON:0000204!1.30e-11!4;UBERON:0010082!1.30e-11!4;UBERON:0001871!2.45e-11!7;UBERON:0000200!1.12e-10!6;UBERON:0005383!3.69e-09!3;UBERON:0005382!3.69e-09!3;UBERON:0002771!1.11e-08!3;UBERON:0000349!1.44e-08!5;UBERON:0001872!1.61e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000369;3.78e-45;4!UBERON:0002435;3.78e-45;4!UBERON:0000204;3.78e-45;4!UBERON:0009663;8.44e-40;7!UBERON:0005383;1.17e-34;3!UBERON:0005382;1.17e-34;3!UBERON:0002420;5.56e-31;9!UBERON:0000125;5.56e-31;9!UBERON:0007245;5.56e-31;9!UBERON:0002308;5.56e-31;9!UBERON:0010009;5.56e-31;9!UBERON:0010011;5.56e-31;9!UBERON:0000454;5.56e-31;9!UBERON:0002791;1.82e-29;32!UBERON:0001869;3.63e-28;32!UBERON:0001893;3.32e-27;34!UBERON:0003528;4.71e-27;34!UBERON:0002020;4.71e-27;34!UBERON:0001873;1.33e-23;2!UBERON:0002780;1.75e-15;41!UBERON:0001890;1.75e-15;41!UBERON:0001950;5.63e-13;20!UBERON:0001874;7.02e-13;1!UBERON:0001882;2.60e-12;1!UBERON:0002022;2.60e-12;1!UBERON:0005403;2.60e-12;1!UBERON:0002619;7.66e-12;22!UBERON:0000073;7.09e-11;53!UBERON:0002616;7.09e-11;53!UBERON:0001017;7.09e-11;75!UBERON:0000955;8.18e-11;68!UBERON:0000956;1.82e-10;25!UBERON:0000203;1.82e-10;25!UBERON:0000200;3.02e-08;6!UBERON:0001016;6.03e-08;83!UBERON:0001871;3.45e-07;6!UBERON:0002771;8.76e-07;2!UBERON:0003714;8.76e-07;2!UBERON:0002702;8.76e-07;2!UBERON:0001875;8.76e-07;2!UBERON:0006514;8.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,2.16e-45,4;UBERON:0002435,2.16e-45,4;UBERON:0000204,2.16e-45,4;UBERON:0010082,2.16e-45,4;UBERON:0009663,5.90e-40,7;UBERON:0005383,1.24e-34,3;UBERON:0005382,1.24e-34,3;UBERON:0002791,3.87e-32,32;UBERON:0001869,3.87e-32,32;UBERON:0002420,4.22e-31,9;UBERON:0000125,4.22e-31,9;UBERON:0007245,4.22e-31,9;UBERON:0002308,4.22e-31,9;UBERON:0010009,4.22e-31,9;UBERON:0010011,4.22e-31,9;UBERON:0000454,4.22e-31,9;UBERON:0003528,3.10e-30,34;UBERON:0002020,3.10e-30,34;UBERON:0001893,3.10e-30,34;UBERON:0002780,5.39e-25,41;UBERON:0001890,5.39e-25,41;UBERON:0003080,5.39e-25,41;UBERON:0006240,5.39e-25,41;UBERON:0001873,1.42e-23,2;UBERON:0010122,1.42e-23,2;UBERON:0000073,3.65e-19,53;UBERON:0002616,3.65e-19,53;UBERON:0001049,4.34e-18,56;UBERON:0005068,4.34e-18,56;UBERON:0006241,4.34e-18,56;UBERON:0007135,4.34e-18,56;UBERON:0000955,1.28e-17,68;UBERON:0006238,1.28e-17,68;UBERON:0003056,1.58e-16,61;UBERON:0001016,1.32e-15,89;UBERON:0001017,1.26e-14,81;UBERON:0001950,6.01e-13,20;UBERON:0001874,7.03e-13,1;UBERON:0001882,1.40e-12,1;UBERON:0005403,1.40e-12,1;UBERON:0002022,2.46e-12,1;UBERON:0003075,5.15e-12,82;UBERON:0007284,5.15e-12,82;UBERON:0002619,8.12e-12,22;UBERON:0002346,2.12e-11,86;UBERON:0000956,1.91e-10,25;UBERON:0000203,1.91e-10,25;UBERON:0010371,3.25e-09,104;UBERON:0007023,2.10e-08,114;UBERON:0000200,3.13e-08,6;UBERON:0004121,1.94e-07,171;UBERON:0000924,1.94e-07,171;UBERON:0006601,1.94e-07,171;UBERON:0001871,3.79e-07,6;UBERON:0010314,5.50e-07,132;UBERON:0002771,8.06e-07,2;UBERON:0001875,9.02e-07,2;UBERON:0006514,9.02e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0.651844533267181,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.593146252648242,0.535081656179426,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.132529768321485,0.232387885739037,0,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0.16480387422676,0,0,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0,0,0,0,1.39152147242777,0,0,0,0,0,0,0,0.689486746482929,0.291604613383254,0.347249989866585,3.54296554325536,2.05013945663194,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0.134802265961354,0,0.468528891450678,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0.313932918407225,1.19472429772959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.949661939338181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,4.99572659188128,0,0.681017030557878,0.321506296930038,0.137539436597234,0,0,0,1.21499113316049,0,0,0.367182116944987,0,0,0,0,0,5.33963929074975,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22026264901963,1.1267183763585,0.573409195690071,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0.123935764259002,1.11728983594649,0,0,0,0,0,1.86264752779733,0,1.27707087245721,0.615349092722265,0,0.760729777106397,0.484426936895553,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.620060389503552,0.824405532520789,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.72350050919134,0,0,0,6.28462359664008,0,0,0,0,0,0.316027223465453,2.78979420883501,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39265542612958,1.07028081699812,0,0.329821550236287,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,1.08786384305464,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724030971033267,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0.651844533267181,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.593146252648242,0.535081656179426,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.132529768321485,0.232387885739037,0,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0.16480387422676,0,0,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0,0,0,0,1.39152147242777,0,0,0,0,0,0,0,0.689486746482929,0.291604613383254,0.347249989866585,3.54296554325536,2.05013945663194,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0.134802265961354,0,0.468528891450678,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0.313932918407225,1.19472429772959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.949661939338181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,4.99572659188128,0,0.681017030557878,0.321506296930038,0.137539436597234,0,0,0,1.21499113316049,0,0,0.367182116944987,0,0,0,0,0,5.33963929074975,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22026264901963,1.1267183763585,0.573409195690071,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0.123935764259002,1.11728983594649,0,0,0,0,0,1.86264752779733,0,1.27707087245721,0.615349092722265,0,0.760729777106397,0.484426936895553,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.620060389503552,0.824405532520789,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.72350050919134,0,0,0,6.28462359664008,0,0,0,0,0,0.316027223465453,2.78979420883501,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39265542612958,1.07028081699812,0,0.329821550236287,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,1.08786384305464,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724030971033267,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@HTR6 | |short_description=p2@HTR6 | ||
}} | }} |
Latest revision as of 15:39, 19 September 2015
Short description: | p2@HTR6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HTR6_5end |
Coexpression cluster: | NA |
Association with transcript: | -436bp_to_ENST00000289753, NM_000871, uc001bcl.2_5end |
EntrezGene: | HTR6 |
HGNC: | 5301 |
UniProt: | P50406 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anemia | 8.85e-13 | 1 |
hematopoietic system disease | 5.11e-07 | 2 |