FFCP PHASE1:Hg19::chr15:89178835..89178856,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3669 | |EntrezGene=3669 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6130 | |HGNC=6130 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-47bp_to_uc002bmu.1_5end | |association_with_transcript=-47bp_to_uc002bmu.1_5end | ||
|cluster_id=chr15:89178835..89178856,+ | |||
|coexpression_cluster_id=C272 | |||
|description=CAGE_peak_7_at_ISG20_5end | |description=CAGE_peak_7_at_ISG20_5end | ||
|id=chr15:89178835..89178856,+ | |id=chr15:89178835..89178856,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.54e-49!53;CL:0000051!1.54e-49!53;CL:0000838!2.38e-48!52;CL:0000791!4.83e-28!18;CL:0000789!4.83e-28!18;CL:0002420!4.83e-28!18;CL:0002419!4.83e-28!18;CL:0000790!4.83e-28!18;CL:0002087!3.46e-24!119;CL:0000738!5.42e-24!140;CL:0000084!7.69e-23!25;CL:0000827!7.69e-23!25;CL:0000945!1.58e-22!24;CL:0000826!1.58e-22!24;CL:0000236!9.33e-22!14;CL:0002031!3.77e-19!124;CL:0000625!7.35e-18!11;CL:0000037!3.92e-17!172;CL:0000566!3.92e-17!172;CL:0000988!2.91e-15!182;CL:0002032!2.65e-14!165;CL:0000837!2.65e-14!165;CL:0000624!1.77e-10!6 | |ontology_enrichment_celltype=CL:0000542!1.54e-49!53;CL:0000051!1.54e-49!53;CL:0000838!2.38e-48!52;CL:0000791!4.83e-28!18;CL:0000789!4.83e-28!18;CL:0002420!4.83e-28!18;CL:0002419!4.83e-28!18;CL:0000790!4.83e-28!18;CL:0002087!3.46e-24!119;CL:0000738!5.42e-24!140;CL:0000084!7.69e-23!25;CL:0000827!7.69e-23!25;CL:0000945!1.58e-22!24;CL:0000826!1.58e-22!24;CL:0000236!9.33e-22!14;CL:0002031!3.77e-19!124;CL:0000625!7.35e-18!11;CL:0000037!3.92e-17!172;CL:0000566!3.92e-17!172;CL:0000988!2.91e-15!182;CL:0002032!2.65e-14!165;CL:0000837!2.65e-14!165;CL:0000624!1.77e-10!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.33e-40;18!CL:0000789;1.33e-40;18!CL:0002419;1.33e-40;18!CL:0000084;2.76e-31;25!CL:0000236;9.94e-29;13!CL:0000542;1.08e-27;53!CL:0000625;6.70e-24;11!CL:0000945;4.16e-19;24!CL:0000624;3.36e-16;6!CL:0000898;1.58e-09;3!CL:0002087;2.77e-09;104!CL:0000226;3.39e-08;3!CL:0000842;3.39e-08;3!CL:0000815;6.39e-07;2!CL:0000792;6.39e-07;2!CL:0002677;6.39e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.04e-49,52;CL:0000542,1.02e-47,53;CL:0000051,1.02e-47,53;CL:0000791,1.03e-40,18;CL:0000789,1.03e-40,18;CL:0002420,1.03e-40,18;CL:0002419,1.03e-40,18;CL:0000790,1.03e-40,18;CL:0000084,2.29e-31,25;CL:0000827,2.29e-31,25;CL:0000236,8.55e-31,14;CL:0002087,6.86e-25,115;CL:0000625,5.65e-24,11;CL:0000738,5.52e-22,136;CL:0002031,2.63e-19,120;CL:0000945,3.81e-19,24;CL:0000826,3.81e-19,24;CL:0000624,3.27e-16,6;CL:0000037,8.46e-16,168;CL:0000988,1.79e-14,177;CL:0002032,6.02e-13,161;CL:0000837,6.02e-13,161;CL:0000898,1.51e-09,3;CL:0000226,4.11e-08,3;CL:0000842,4.11e-08,3;CL:0000815,6.12e-07,2;CL:0000792,6.12e-07,2;CL:0002677,6.12e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.33e-40;18!CL:0000051;1.08e-27;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.57e-14!15;UBERON:0000179!5.57e-14!15;UBERON:0000463!5.57e-14!15;UBERON:0004177!2.69e-08!7;UBERON:0002370!1.82e-07!4;UBERON:0005058!1.82e-07!4;UBERON:0009113!1.82e-07!4;UBERON:0003295!1.82e-07!4;UBERON:0005562!1.82e-07!4;UBERON:0003408!4.36e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.09e-23;15!UBERON:0000179;8.09e-23;15!UBERON:0000463;8.09e-23;15!UBERON:0002390;1.47e-15;32!UBERON:0002193;7.63e-11;42!UBERON:0004177;1.99e-08;5!UBERON:0005057;1.99e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.06e-23,15;UBERON:0000179,9.06e-23,15;UBERON:0000463,9.06e-23,15;UBERON:0004177,6.49e-13,7;UBERON:0005057,6.49e-13,7;UBERON:0002370,2.86e-11,4;UBERON:0005058,2.86e-11,4;UBERON:0009113,2.86e-11,4;UBERON:0003295,2.86e-11,4;UBERON:0005562,2.86e-11,4;UBERON:0003351,1.67e-07,6 | |||
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| ||
|short_description=p7@ISG20 | |short_description=p7@ISG20 | ||
}} | }} |
Latest revision as of 15:32, 19 September 2015
Short description: | p7@ISG20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ISG20_5end |
Coexpression cluster: | C272_CD19_CD4_CD8_Whole_Peripheral_lymph_tonsil |
Association with transcript: | -47bp_to_uc002bmu.1_5end |
EntrezGene: | ISG20 |
HGNC: | 6130 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.04e-49 | 52 |
lymphocyte | 1.02e-47 | 53 |
common lymphoid progenitor | 1.02e-47 | 53 |
mature alpha-beta T cell | 1.03e-40 | 18 |
alpha-beta T cell | 1.03e-40 | 18 |
immature T cell | 1.03e-40 | 18 |
mature T cell | 1.03e-40 | 18 |
immature alpha-beta T cell | 1.03e-40 | 18 |
T cell | 2.29e-31 | 25 |
pro-T cell | 2.29e-31 | 25 |
B cell | 8.55e-31 | 14 |
nongranular leukocyte | 6.86e-25 | 115 |
CD8-positive, alpha-beta T cell | 5.65e-24 | 11 |
leukocyte | 5.52e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 2.63e-19 | 120 |
lymphocyte of B lineage | 3.81e-19 | 24 |
pro-B cell | 3.81e-19 | 24 |
CD4-positive, alpha-beta T cell | 3.27e-16 | 6 |
hematopoietic stem cell | 8.46e-16 | 168 |
hematopoietic cell | 1.79e-14 | 177 |
hematopoietic oligopotent progenitor cell | 6.02e-13 | 161 |
hematopoietic multipotent progenitor cell | 6.02e-13 | 161 |
naive T cell | 1.51e-09 | 3 |
single nucleate cell | 4.11e-08 | 3 |
mononuclear cell | 4.11e-08 | 3 |
regulatory T cell | 6.12e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.12e-07 | 2 |
naive regulatory T cell | 6.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 9.06e-23 | 15 |
haemolymphatic fluid | 9.06e-23 | 15 |
organism substance | 9.06e-23 | 15 |
hemopoietic organ | 6.49e-13 | 7 |
immune organ | 6.49e-13 | 7 |
thymus | 2.86e-11 | 4 |
hemolymphoid system gland | 2.86e-11 | 4 |
thymic region | 2.86e-11 | 4 |
pharyngeal gland | 2.86e-11 | 4 |
thymus primordium | 2.86e-11 | 4 |
pharyngeal epithelium | 1.67e-07 | 6 |