FFCP PHASE1:Hg19::chr19:51845411..51845412,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147645 | |EntrezGene=147645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27111 | |HGNC=27111 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VR7,A2VDI5 | |UniProt=Q86VR7,A2VDI5 | ||
|association_with_transcript=-33bp_to_ENST00000335624,ENST00000542561,NM_001163922,uc002pwf.2_5end | |association_with_transcript=-33bp_to_ENST00000335624,ENST00000542561,NM_001163922,uc002pwf.2_5end | ||
|cluster_id=chr19:51845411..51845412,- | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_10_at_VSIG10L_5end | |description=CAGE_peak_10_at_VSIG10L_5end | ||
|id=chr19:51845411..51845412,- | |id=chr19:51845411..51845412,- | ||
|ontology_enrichment_celltype=CL:0000540!2.30e-07!6;CL:0000031!2.30e-07!6;CL:0000404!2.30e-07!6 | |ontology_enrichment_celltype=CL:0000540!2.30e-07!6;CL:0000031!2.30e-07!6;CL:0000404!2.30e-07!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.39e-66;1!UBERON:0008801;2.39e-66;1!UBERON:0008814;5.04e-34;2!UBERON:0010056;5.04e-34;2 | |||
|ontology_enrichment_disease=DOID:178!3.41e-11!1;DOID:326!3.41e-11!1;DOID:3978!3.41e-11!1;DOID:3394!3.41e-11!1;DOID:5844!3.41e-11!1;DOID:0050619!9.97e-11!1;DOID:1357!9.97e-11!1 | |ontology_enrichment_disease=DOID:178!3.41e-11!1;DOID:326!3.41e-11!1;DOID:3978!3.41e-11!1;DOID:3394!3.41e-11!1;DOID:5844!3.41e-11!1;DOID:0050619!9.97e-11!1;DOID:1357!9.97e-11!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!1.69e-20!2;UBERON:0001044!3.13e-15!6;UBERON:0003293!3.13e-15!6;UBERON:0003294!3.13e-15!6;UBERON:0010047!3.13e-15!6;UBERON:0000167!3.13e-15!6;UBERON:0000078!1.77e-13!18;UBERON:0000166!1.55e-11!21;UBERON:0001831!3.08e-11!1;UBERON:0001567!3.08e-11!1;UBERON:0008801!3.08e-11!1;UBERON:0002372!4.58e-11!1;UBERON:0001961!4.58e-11!1;UBERON:0001744!4.58e-11!1;UBERON:0001735!4.58e-11!1;UBERON:0001736!5.05e-11!1;UBERON:0006298!5.05e-11!1;UBERON:0001764!9.97e-11!1;UBERON:0001825!9.97e-11!1;UBERON:0000161!1.51e-09!35;UBERON:0003408!2.36e-09!10;UBERON:0000165!1.30e-08!28;UBERON:0000930!1.30e-08!28;UBERON:0001004!1.41e-07!72;UBERON:0004921!3.39e-07!129;UBERON:0004185!3.39e-07!129 | |ontology_enrichment_uberon=UBERON:0001829!1.69e-20!2;UBERON:0001044!3.13e-15!6;UBERON:0003293!3.13e-15!6;UBERON:0003294!3.13e-15!6;UBERON:0010047!3.13e-15!6;UBERON:0000167!3.13e-15!6;UBERON:0000078!1.77e-13!18;UBERON:0000166!1.55e-11!21;UBERON:0001831!3.08e-11!1;UBERON:0001567!3.08e-11!1;UBERON:0008801!3.08e-11!1;UBERON:0002372!4.58e-11!1;UBERON:0001961!4.58e-11!1;UBERON:0001744!4.58e-11!1;UBERON:0001735!4.58e-11!1;UBERON:0001736!5.05e-11!1;UBERON:0006298!5.05e-11!1;UBERON:0001764!9.97e-11!1;UBERON:0001825!9.97e-11!1;UBERON:0000161!1.51e-09!35;UBERON:0003408!2.36e-09!10;UBERON:0000165!1.30e-08!28;UBERON:0000930!1.30e-08!28;UBERON:0001004!1.41e-07!72;UBERON:0004921!3.39e-07!129;UBERON:0004185!3.39e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001831;2.39e-66;1!UBERON:0001567;2.39e-66;1!UBERON:0001829;5.04e-34;2!UBERON:0004089;5.04e-34;2!UBERON:0001043;3.27e-23;3!UBERON:0001723;3.27e-23;3!UBERON:0001033;3.27e-23;3!UBERON:0001041;6.48e-20;14!UBERON:0001044;2.45e-12;6!UBERON:0003293;2.45e-12;6!UBERON:0003294;2.45e-12;6!UBERON:0010047;2.45e-12;6!UBERON:0003408;2.45e-12;6!UBERON:0000167;2.45e-12;6!UBERON:0000165;1.47e-10;28!UBERON:0001555;2.48e-10;54!UBERON:0004921;1.25e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,4.66e-66,1;UBERON:0001567,4.66e-66,1;UBERON:0008801,4.66e-66,1;UBERON:0001829,7.05e-34,2;UBERON:0004089,7.05e-34,2;UBERON:0001723,2.62e-23,3;UBERON:0001033,2.62e-23,3;UBERON:0010056,2.62e-23,3;UBERON:0001043,3.27e-23,3;UBERON:0009143,3.27e-23,3;UBERON:0000166,4.01e-13,22;UBERON:0001044,2.74e-12,6;UBERON:0003293,2.74e-12,6;UBERON:0003294,2.74e-12,6;UBERON:0010047,2.74e-12,6;UBERON:0000167,2.74e-12,6;UBERON:0000165,3.10e-10,29;UBERON:0000930,3.10e-10,29;UBERON:0000161,1.85e-08,36;UBERON:0001042,5.73e-08,10;UBERON:0009145,5.73e-08,10;UBERON:0003408,6.56e-08,10;UBERON:0001041,7.10e-08,87;UBERON:0006562,2.32e-07,11 | |||
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|short_description=p10@VSIG10L | |short_description=p10@VSIG10L | ||
}} | }} |
Latest revision as of 14:30, 19 September 2015
Short description: | p10@VSIG10L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_VSIG10L_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -33bp_to_ENST00000335624, ENST00000542561, NM_001163922, uc002pwf.2_5end |
EntrezGene: | VSIG10L |
HGNC: | 27111 |
UniProt: | Q86VR7A2VDI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parotid gland | 4.66e-66 | 1 |
cheek | 4.66e-66 | 1 |
parotid gland primordium | 4.66e-66 | 1 |
major salivary gland | 7.05e-34 | 2 |
midface | 7.05e-34 | 2 |
tongue | 2.62e-23 | 3 |
gustatory system | 2.62e-23 | 3 |
future tongue | 2.62e-23 | 3 |
esophagus | 3.27e-23 | 3 |
esophageal region | 3.27e-23 | 3 |
oral opening | 4.01e-13 | 22 |
saliva-secreting gland | 2.74e-12 | 6 |
gland of oral region | 2.74e-12 | 6 |
gland of foregut | 2.74e-12 | 6 |
oral gland | 2.74e-12 | 6 |
oral cavity | 2.74e-12 | 6 |
mouth | 3.10e-10 | 29 |
stomodeum | 3.10e-10 | 29 |
orifice | 1.85e-08 | 36 |
chordate pharynx | 5.73e-08 | 10 |
pharyngeal region of foregut | 5.73e-08 | 10 |
gland of gut | 6.56e-08 | 10 |
foregut | 7.10e-08 | 87 |
pharynx | 2.32e-07 | 11 |