FFCP PHASE1:Hg19::chr19:51845384..51845409,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:51845384..51845409,- to FFCP PHASE1:Hg19::chr19:51845384..51845409,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=147645 | |EntrezGene=147645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27111 | |HGNC=27111 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VR7,A2VDI5 | |UniProt=Q86VR7,A2VDI5 | ||
|association_with_transcript=-6bp_to_ENST00000335624,ENST00000542561,NM_001163922,uc002pwf.2_5end | |||
|cluster_id=chr19:51845384..51845409,- | |||
|coexpression_cluster_id=C2213 | |||
|description=CAGE_peak_1_at_VSIG10L_5end | |||
|id=chr19:51845384..51845409,- | |||
|ontology_enrichment_celltype=CL:0000223!6.73e-29!59;CL:0002076!1.58e-25!43;CL:0002368!2.73e-14!13;CL:0002251!9.67e-13!21;CL:0000066!1.24e-10!254;CL:0000622!1.24e-09!5;CL:0002202!5.27e-09!9;CL:0002632!5.27e-09!9;CL:0000154!6.43e-08!6;CL:0002159!1.40e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000622;3.29e-16;5!CL:0002076;2.83e-15;42!CL:0002368;6.03e-14;13!CL:0000154;1.87e-13;6!CL:0002202;6.77e-12;9!CL:0002632;6.77e-12;9!CL:0002623;1.22e-10;3!CL:0002621;3.64e-10;3!CL:0002328;4.47e-10;3!CL:0002251;4.91e-09;20!CL:0000150;7.48e-09;9!CL:0000575;1.02e-07;2!CL:0002159;1.14e-07;14!CL:0000317;2.88e-07;2!CL:1000448;2.88e-07;2!CL:0002308;2.88e-07;2!CL:0002140;2.88e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,4.58e-22,58;CL:0002076,1.51e-19,42;CL:0000622,3.51e-16,5;CL:0002368,6.56e-14,13;CL:0000154,1.98e-13,6;CL:0002202,8.45e-12,9;CL:0002632,8.45e-12,9;CL:0002623,1.14e-10,3;CL:0002621,4.27e-10,3;CL:0002328,5.50e-10,3;CL:0002251,4.51e-09,20;CL:0000150,7.74e-09,9;CL:0000575,1.09e-07,2;CL:0002159,1.26e-07,14;CL:0000317,3.28e-07,2;CL:1000448,3.28e-07,2;CL:0002308,3.28e-07,2;CL:0002140,3.28e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;3.27e-12;58!UBERON:0009497;2.62e-10;13!UBERON:0004161;4.13e-09;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.08e-29!169;UBERON:0000925!2.08e-29!169;UBERON:0006595!2.08e-29!169;UBERON:0001007!5.14e-24!155;UBERON:0001555!5.14e-24!155;UBERON:0007026!5.14e-24!155;UBERON:0000077!1.40e-23!130;UBERON:0001004!2.32e-21!72;UBERON:0004921!2.17e-20!129;UBERON:0004185!2.17e-20!129;UBERON:0001041!4.11e-20!98;UBERON:0005911!4.30e-18!82;UBERON:0000161!1.01e-16!35;UBERON:0000166!1.03e-16!21;UBERON:0002365!2.18e-15!31;UBERON:0002330!2.18e-15!31;UBERON:0002530!1.65e-14!59;UBERON:0003929!3.29e-13!54;UBERON:0000165!7.13e-13!28;UBERON:0000930!7.13e-13!28;UBERON:0001044!5.58e-12!6;UBERON:0003293!5.58e-12!6;UBERON:0003294!5.58e-12!6;UBERON:0010047!5.58e-12!6;UBERON:0000167!5.58e-12!6;UBERON:0000466!8.16e-12!126;UBERON:0003102!1.29e-11!95;UBERON:0003408!4.14e-11!10;UBERON:0000065!5.92e-11!53;UBERON:0005177!2.02e-10!107;UBERON:0003104!6.76e-10!238;UBERON:0009142!6.76e-10!238;UBERON:0009497!2.08e-09!25;UBERON:0000015!2.08e-09!25;UBERON:0002423!2.08e-09!25;UBERON:0006235!2.08e-09!25;UBERON:0004161!2.08e-09!25;UBERON:0000475!2.51e-09!365;UBERON:0005178!4.09e-09!34;UBERON:0002224!4.09e-09!34;UBERON:0007196!5.01e-09!14;UBERON:0001558!5.01e-09!14;UBERON:0005181!9.80e-09!35;UBERON:0009569!5.05e-08!113;UBERON:0000072!9.99e-08!46;UBERON:0001444!1.02e-07!48;UBERON:0000078!1.78e-07!18;UBERON:0005057!2.14e-07!26;UBERON:0000464!2.77e-07!104;UBERON:0004807!2.96e-07!28;UBERON:0000974!5.94e-07!10;UBERON:0007499!7.10e-07!25;UBERON:0008835!9.54e-07!22;UBERON:0003894!9.54e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.09e-20;6!UBERON:0003293;2.09e-20;6!UBERON:0003294;2.09e-20;6!UBERON:0010047;2.09e-20;6!UBERON:0003408;2.09e-20;6!UBERON:0000167;2.09e-20;6!UBERON:0002365;1.64e-16;31!UBERON:0002330;1.64e-16;31!UBERON:0000161;7.28e-16;19!UBERON:0000166;7.28e-16;19!UBERON:0000165;7.27e-15;28!UBERON:0001041;1.26e-14;14!UBERON:0007196;3.31e-12;15!UBERON:0001558;3.31e-12;15!UBERON:0001949;3.64e-10;3!UBERON:0004815;4.47e-10;3!UBERON:0002031;4.47e-10;3!UBERON:0001829;3.59e-08;2!UBERON:0003127;1.24e-07;2!UBERON:0003126;1.57e-07;7!UBERON:0001005;1.57e-07;7!UBERON:0004921;2.48e-07;33!UBERON:0003929;2.66e-07;7!UBERON:0002419;2.88e-07;2!UBERON:0007771;2.88e-07;2!UBERON:0003297;2.88e-07;2!UBERON:0001821;2.88e-07;2!UBERON:0003487;2.88e-07;2!UBERON:0001820;2.88e-07;2!UBERON:0000485;2.97e-07;7!UBERON:0007811;3.67e-07;52!UBERON:0002530;7.34e-07;57!UBERON:0001004;8.56e-07;65!UBERON:0000153;9.52e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.96e-20,6;UBERON:0003293,1.96e-20,6;UBERON:0003294,1.96e-20,6;UBERON:0010047,1.96e-20,6;UBERON:0000167,1.96e-20,6;UBERON:0000166,1.11e-19,22;UBERON:0001041,2.83e-18,87;UBERON:0002365,8.67e-17,31;UBERON:0002330,8.67e-17,31;UBERON:0004119,1.36e-16,160;UBERON:0000925,1.36e-16,160;UBERON:0006595,1.36e-16,160;UBERON:0001004,1.19e-15,74;UBERON:0000165,3.09e-14,29;UBERON:0000930,3.09e-14,29;UBERON:0001007,3.33e-14,145;UBERON:0001555,3.33e-14,145;UBERON:0007026,3.33e-14,145;UBERON:0004921,6.89e-14,118;UBERON:0000161,8.14e-13,36;UBERON:0007196,3.77e-12,15;UBERON:0001558,3.77e-12,15;UBERON:0003408,5.96e-12,10;UBERON:0003102,2.01e-10,99;UBERON:0001444,3.15e-10,49;UBERON:0001949,4.27e-10,3;UBERON:0004815,5.50e-10,3;UBERON:0002031,5.50e-10,3;UBERON:0002530,7.04e-10,59;UBERON:0005911,9.20e-09,82;UBERON:0000153,1.04e-08,62;UBERON:0007811,1.04e-08,62;UBERON:0000033,1.52e-08,56;UBERON:0001829,3.60e-08,2;UBERON:0003127,1.13e-07,2;UBERON:0003126,1.64e-07,7;UBERON:0001005,1.64e-07,7;UBERON:0005178,1.78e-07,34;UBERON:0002224,1.78e-07,34;UBERON:0002419,3.28e-07,2;UBERON:0007771,3.28e-07,2;UBERON:0003297,3.28e-07,2;UBERON:0001821,3.28e-07,2;UBERON:0003487,3.28e-07,2;UBERON:0001820,3.28e-07,2;UBERON:0005089,3.28e-07,2;UBERON:0005088,3.28e-07,2;UBERON:0005181,3.31e-07,35;UBERON:0000065,3.75e-07,54 | |||
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| ||
|short_description=p1@VSIG10L | |||
}} | }} |
Latest revision as of 14:30, 19 September 2015
Short description: | p1@VSIG10L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VSIG10L_5end |
Coexpression cluster: | C2213_salivary_esophagus_tonsil_throat_tongue_submaxillary_parotid |
Association with transcript: | -6bp_to_ENST00000335624, ENST00000542561, NM_001163922, uc002pwf.2_5end |
EntrezGene: | VSIG10L |
HGNC: | 27111 |
UniProt: | Q86VR7A2VDI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 4.58e-22 | 58 |
endo-epithelial cell | 1.51e-19 | 42 |
acinar cell | 3.51e-16 | 5 |
respiratory epithelial cell | 6.56e-14 | 13 |
protein secreting cell | 1.98e-13 | 6 |
epithelial cell of tracheobronchial tree | 8.45e-12 | 9 |
epithelial cell of lower respiratory tract | 8.45e-12 | 9 |
acinar cell of salivary gland | 1.14e-10 | 3 |
gingival epithelial cell | 4.27e-10 | 3 |
bronchial epithelial cell | 5.50e-10 | 3 |
epithelial cell of alimentary canal | 4.51e-09 | 20 |
glandular epithelial cell | 7.74e-09 | 9 |
corneal epithelial cell | 1.09e-07 | 2 |
general ecto-epithelial cell | 1.26e-07 | 14 |
sebum secreting cell | 3.28e-07 | 2 |
epithelial cell of sweat gland | 3.28e-07 | 2 |
epithelial cell of skin gland | 3.28e-07 | 2 |
acinar cell of sebaceous gland | 3.28e-07 | 2 |