FFCP PHASE1:Hg19::chr6:105585002..105585013,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11149 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1152 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NE79 | |||
|association_with_transcript=35bp_to_ENST00000314641,NM_001199563,uc003pqy.2_5end | |||
|cluster_id=chr6:105585002..105585013,- | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_3_at_BVES_5end | |||
|id=chr6:105585002..105585013,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000054;4.89e-09;2!CL:0000137;4.89e-09;2!CL:0000092;4.89e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,5.56e-09,2;CL:0000137,5.56e-09,2;CL:0000092,5.56e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.95e-10;4!UBERON:0007284;1.95e-10;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;5.90e-10;2!DOID:200;4.89e-09;2!DOID:4305;4.89e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.93e-10,2;DOID:200,5.56e-09,2;DOID:4305,5.56e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.11e-18!115;UBERON:0001049!5.14e-09!57;UBERON:0005068!5.14e-09!57;UBERON:0006241!5.14e-09!57;UBERON:0007135!5.14e-09!57;UBERON:0000073!6.49e-09!94;UBERON:0001016!6.49e-09!94;UBERON:0002298!1.02e-07!8;UBERON:0001017!1.80e-07!82;UBERON:0003075!2.84e-07!86;UBERON:0007284!2.84e-07!86;UBERON:0005743!4.19e-07!86;UBERON:0000955!7.84e-07!69;UBERON:0006238!7.84e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;6.17e-14;3!UBERON:0003978;9.07e-14;3!UBERON:0000946;9.07e-14;3!UBERON:0007100;1.34e-12;25!UBERON:0000125;5.10e-11;9!UBERON:0002308;5.10e-11;9!UBERON:0005090;4.95e-10;2!UBERON:0001630;4.95e-10;2!UBERON:0002081;9.49e-10;2!UBERON:0002133;9.49e-10;2!UBERON:0000341;4.89e-09;2!UBERON:0002148;4.89e-09;2!UBERON:0001875;4.89e-09;2!UBERON:0006331;4.89e-09;2!UBERON:0009662;4.89e-09;2!UBERON:0006514;4.89e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.06e-18,114;UBERON:0003978,8.05e-14,3;UBERON:0009751,8.05e-14,3;UBERON:0004151,8.05e-14,3;UBERON:0000946,8.05e-14,3;UBERON:0002523,8.05e-14,3;UBERON:0005983,8.05e-14,3;UBERON:0002165,8.05e-14,3;UBERON:0002062,8.05e-14,3;UBERON:0007280,8.05e-14,3;UBERON:0007100,1.62e-11,27;UBERON:0000125,8.73e-11,9;UBERON:0002308,8.73e-11,9;UBERON:0005090,5.20e-10,2;UBERON:0001630,5.20e-10,2;UBERON:0002133,9.14e-10,2;UBERON:0002081,1.18e-09,2;UBERON:0010227,1.18e-09,2;UBERON:0003103,3.15e-09,68;UBERON:0000341,5.79e-09,2;UBERON:0002148,5.79e-09,2;UBERON:0006331,5.79e-09,2;UBERON:0009662,5.79e-09,2;UBERON:0001875,1.25e-08,2;UBERON:0006514,1.25e-08,2;UBERON:0010314,9.21e-07,132 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0.434539556882471,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0.438977620880838,0.30648779579902,1.05166641234618,0.113432183160021,0.358779271377724,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0.675105328965065,0.974370051611986,0,0.460249493211497,0,1.42003837006646,0.201504196455281,0.67824236924195,0.193260853163297,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0.205654985406647,0.600686115687835,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,1.42636905040718,0.434343920002738,0.205476322550383,0.895304816199478,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0.35142424497814,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.61384789315225,1.12264037773229,0.128139149255701,0.511707249066704,0.64341568457443,0,0,0,0.246381468041427,0,0.232420756919918,0.120859449591622,0.200506470303285,0,0,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0.366277859273374,0.577566499444116,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0.712256285173899,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0.281695602532241,0.143411352204052,0,0,0,0.211107635297664,0,0,0.699869440489966,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0.962479855263359,0.245040215981032,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921722292925374,0.223676107892416,0,0,0,0,0,0,0,0,0.586032717087576,0.121360521749513,0,0,0,0,0,0.994147647766298,0,0.445234820091624,1.31843099381408,0,0.398495976502139,0.276283915531148,0,0.20453736500431,0,0.622079175323615,0,0,0,0.591860433821602,0,0,0,0.371072392647405,0,0,0,1.44999915086959,0,0,0,0,0,0.173624994933292,0.885741385813839,0,0,0.110579259931225,0,0.438770794307945,0,0.139423744278603,0.307801034015188,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,1.99052386215701,0.442287822516696,0.611030144933625,1.77912677208373,0.988511511572023,0.313265848516366,0.808813595768125,5.61804353109152,0.702793337176017,0,0,0,1.97292201424695,0,0,0,0.60129367765797,0.103688191397247,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0.34823682632161,0.34945333648406,0.171986032471617,0,0,0,0.872901148395775,0,0.677942222341597,0.411125773940253,1.58971689362392,0.0633107959558787,0,0,0,0,0,0,0.343189995723929,0,0.372757606696298,0.235694034616795,0.271808412147228,0,0.509991088181609,0.577901179803038,1.20084057741958,1.09524303113594,0,0,0,2.79282401272254,2.7499250881402,2.15361907373044,2.59582700648688,6.00916467391199,1.33902874465124,23.5813988428409,0.720599767084807,0,0,0,0,0.688992370603241,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,2.1440859791201,5.29673576292345,0,0,0,0,1.19730191562487,0,0.170388021785422,0.679872549120754,0,0,1.55139547633861,1.19009341568421,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.122026264901963,0.3755727921195,0.573409195690071,0.554645257684261,0.434674820589684,0,0.124980407962107,0.151649117541648,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0.155262956876259,0,0,0,0,0,0,0.363697318405119,0,0,0,0.800055529326307,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0.276516872303462,0,0,0.163565394255844,0.982829546539238,0.491545817507439,0,0.79994958341972,0.426766918776564,0,0,0.184105950251841,0.139879507719444,0,0.255788742607303,0.323474434190045,0,0.327628914576042,0,0,0,0,0.318004350653419,0.0788617450012534,0,0.352675943690684,0.3062454773532,0.128458450192919,0,0,0.615349092722265,0.252071696221718,0.0691572524642179,0.484426936895553,1.42769420259154,0,0,0,0,1.1441462864015,0.690359926060101,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0.781078098613847,0.206686796501184,0.443910671357348,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115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| |||
|short_description=p3@BVES | |||
}} |
Latest revision as of 14:05, 19 September 2015
Short description: | p3@BVES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BVES_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 35bp_to_ENST00000314641, NM_001199563, uc003pqy.2_5end |
EntrezGene: | BVES |
HGNC: | 1152 |
UniProt: | Q8NE79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 5.56e-09 | 2 |
osteocyte | 5.56e-09 | 2 |
osteoclast | 5.56e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.06e-18 | 114 |
valve | 8.05e-14 | 3 |
cardiac mesenchyme | 8.05e-14 | 3 |
cardiac chamber | 8.05e-14 | 3 |
cardial valve | 8.05e-14 | 3 |
tunica intima | 8.05e-14 | 3 |
heart layer | 8.05e-14 | 3 |
endocardium | 8.05e-14 | 3 |
endocardial cushion | 8.05e-14 | 3 |
presumptive endocardium | 8.05e-14 | 3 |
primary circulatory organ | 1.62e-11 | 27 |
neural nucleus | 8.73e-11 | 9 |
nucleus of brain | 8.73e-11 | 9 |
muscle structure | 5.20e-10 | 2 |
muscle organ | 5.20e-10 | 2 |
atrioventricular valve | 9.14e-10 | 2 |
cardiac atrium | 1.18e-09 | 2 |
future cardiac atrium | 1.18e-09 | 2 |
compound organ | 3.15e-09 | 68 |
throat | 5.79e-09 | 2 |
locus ceruleus | 5.79e-09 | 2 |
brainstem nucleus | 5.79e-09 | 2 |
hindbrain nucleus | 5.79e-09 | 2 |
globus pallidus | 1.25e-08 | 2 |
pallidum | 1.25e-08 | 2 |
structure with developmental contribution from neural crest | 9.21e-07 | 132 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.93e-10 | 2 |
giant cell tumor | 5.56e-09 | 2 |
bone giant cell tumor | 5.56e-09 | 2 |