FFCP PHASE1:Hg19::chrX:134232727..134232747,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=644596 | |EntrezGene=644596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=34500 | |HGNC=34500 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_024493,uc004eyh.2_5end | |association_with_transcript=0bp_to_NR_024493,uc004eyh.2_5end | ||
|cluster_id=chrX:134232727..134232747,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_LINC00087_5end | |description=CAGE_peak_1_at_LINC00087_5end | ||
|id=chrX:134232727..134232747,- | |id=chrX:134232727..134232747,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000147;3.05e-07;14!CL:0002322;4.73e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,3.87e-07,14;CL:0002322,5.01e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.54e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!9.84e-34!86;UBERON:0003075!1.64e-32!86;UBERON:0007284!1.64e-32!86;UBERON:0001017!7.39e-32!82;UBERON:0002346!1.10e-31!90;UBERON:0002616!1.41e-31!59;UBERON:0001049!4.59e-31!57;UBERON:0005068!4.59e-31!57;UBERON:0006241!4.59e-31!57;UBERON:0007135!4.59e-31!57;UBERON:0007023!7.36e-31!115;UBERON:0000073!8.08e-30!94;UBERON:0001016!8.08e-30!94;UBERON:0000955!3.67e-29!69;UBERON:0006238!3.67e-29!69;UBERON:0004121!1.91e-28!169;UBERON:0000924!2.98e-28!173;UBERON:0006601!2.98e-28!173;UBERON:0000033!7.16e-27!123;UBERON:0000153!1.01e-26!129;UBERON:0007811!1.01e-26!129;UBERON:0003056!3.49e-24!61;UBERON:0003080!2.17e-22!42;UBERON:0002780!2.57e-22!41;UBERON:0001890!2.57e-22!41;UBERON:0006240!2.57e-22!41;UBERON:0000481!6.70e-22!347;UBERON:0002020!2.91e-21!34;UBERON:0003528!2.91e-21!34;UBERON:0000475!3.27e-21!365;UBERON:0001893!3.60e-21!34;UBERON:0002791!1.93e-20!33;UBERON:0001869!2.32e-20!32;UBERON:0000064!1.53e-19!219;UBERON:0000119!7.50e-19!312;UBERON:0000483!1.89e-18!309;UBERON:0002619!2.78e-16!22;UBERON:0000956!3.86e-16!25;UBERON:0000203!3.86e-16!25;UBERON:0000477!2.36e-15!286;UBERON:0000062!4.70e-15!511;UBERON:0001950!6.48e-15!20;UBERON:0000468!3.54e-14!659;UBERON:0000922!6.76e-13!612;UBERON:0004111!2.83e-12!241;UBERON:0000025!7.70e-12!194;UBERON:0002050!2.21e-10!605;UBERON:0005423!2.21e-10!605;UBERON:0000923!4.40e-10!604;UBERON:0005291!4.40e-10!604;UBERON:0006598!4.40e-10!604;UBERON:0002532!4.40e-10!604;UBERON:0003076!9.09e-10!15;UBERON:0003057!9.09e-10!15;UBERON:0000467!2.05e-09!625;UBERON:0000480!3.06e-09!626;UBERON:0004732!2.69e-08!13;UBERON:0004733!5.44e-08!12;UBERON:0002028!5.44e-08!12;UBERON:0007277!5.44e-08!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.65e-27;32!UBERON:0001893;1.69e-27;34!UBERON:0002619;1.88e-27;22!UBERON:0003528;1.91e-27;34!UBERON:0002020;1.91e-27;34!UBERON:0002791;5.86e-27;32!UBERON:0001950;4.96e-25;20!UBERON:0000073;6.66e-24;53!UBERON:0002616;6.66e-24;53!UBERON:0002780;1.40e-23;41!UBERON:0001890;1.40e-23;41!UBERON:0000956;3.09e-23;25!UBERON:0000203;3.09e-23;25!UBERON:0001017;2.15e-20;75!UBERON:0000955;4.82e-19;68!UBERON:0001016;1.39e-14;83!UBERON:0004732;5.09e-12;13!UBERON:0004733;1.81e-11;12!UBERON:0002028;1.81e-11;12!UBERON:0002420;1.68e-10;9!UBERON:0007245;1.68e-10;9!UBERON:0010009;1.68e-10;9!UBERON:0010011;1.68e-10;9!UBERON:0000454;1.68e-10;9!UBERON:0000125;1.87e-10;9!UBERON:0002308;1.87e-10;9!UBERON:0007023;1.35e-09;114!UBERON:0001871;2.02e-09;6!UBERON:0011216;2.49e-09;132!UBERON:0000200;6.33e-09;6!UBERON:0002298;1.89e-08;6!UBERON:0002680;2.33e-08;9!UBERON:0001895;2.33e-08;9!UBERON:0009663;4.18e-08;7!UBERON:0000349;1.12e-07;5!UBERON:0001872;4.85e-07;5!UBERON:0010314;7.16e-07;132!UBERON:0002021;8.75e-07;5 | |||
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| ||
|short_description=p1@LINC00087 | |short_description=p1@LINC00087 | ||
}} | }} |
Latest revision as of 13:29, 19 September 2015
Short description: | p1@LINC00087 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00087_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NR_024493, uc004eyh.2_5end |
EntrezGene: | LINC00087 |
HGNC: | 34500 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 3.87e-07 | 14 |
embryonic stem cell | 5.01e-07 | 5 |