FFCP PHASE1:Hg19::chr19:51456353..51456364,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25818 | |EntrezGene=25818 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6366 | |HGNC=6366 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y337,Q53ZR3 | |UniProt=Q9Y337,Q53ZR3 | ||
|association_with_transcript=-9bp_to_ENST00000336334,ENST00000391809,NM_001077491,NM_001077492,NM_012427,uc002pue.2,uc002puf.2,uc002pug.2_5end | |association_with_transcript=-9bp_to_ENST00000336334,ENST00000391809,NM_001077491,NM_001077492,NM_012427,uc002pue.2,uc002puf.2,uc002pug.2_5end | ||
|cluster_id=chr19:51456353..51456364,- | |||
|coexpression_cluster_id=C2500 | |coexpression_cluster_id=C2500 | ||
|description=CAGE_peak_2_at_KLK5_5end | |description=CAGE_peak_2_at_KLK5_5end | ||
|id=chr19:51456353..51456364,- | |id=chr19:51456353..51456364,- | ||
|ontology_enrichment_celltype=CL:0002159;4.71e-15;14!CL:0002327;1.82e-14;4!CL:0000575;1.51e-13;2!CL:1000415;2.81e-13;2!CL:0000312;2.35e-11;5!CL:0000240;1.51e-09;6!CL:0000311;1.51e-09;6!CL:0000079;1.51e-09;6!CL:0000237;1.51e-09;6!CL:0002231;3.90e-09;3!CL:0002077;1.31e-08;34 | |ontology_enrichment_celltype=CL:0000066!1.47e-15!254;CL:0002251!6.65e-12!21;CL:0000076!5.33e-11!62;CL:0002159!1.55e-10!13;CL:0002076!3.62e-10!43;CL:0002077!4.87e-10!33;CL:0002621!2.03e-09!3;CL:0000223!7.17e-09!59;CL:0002322!1.62e-08!5;CL:0002327!1.14e-07!4;CL:0000575!2.36e-07!2;CL:1000415!3.09e-07!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0002159;4.71e-15;14!CL:0002327;1.82e-14;4!CL:0000575;1.51e-13;2!CL:1000415;2.81e-13;2!CL:0000312;2.35e-11;5!CL:0000240;1.51e-09;6!CL:0000311;1.51e-09;6!CL:0000079;1.51e-09;6!CL:0000237;1.51e-09;6!CL:0002231;3.90e-09;3!CL:0002077;1.31e-08;34 | ||
|ontology_enrichment_disease=DOID:1749;3.09e-11;14 | |ontology_enrichment_celltype_v019_2=CL:0002159,4.60e-15,14;CL:0002327,1.59e-14,4;CL:0000066,1.07e-13,253;CL:0000575,1.71e-13,2;CL:1000415,2.99e-13,2;CL:0000076,9.19e-12,63;CL:0000312,2.31e-11,5;CL:0002077,3.41e-10,34;CL:0000240,1.49e-09,6;CL:0000311,1.49e-09,6;CL:0000079,1.49e-09,6;CL:0000237,1.49e-09,6;CL:0000036,1.49e-09,6;CL:0000357,1.49e-09,6;CL:0000114,1.49e-09,6;CL:0002231,3.24e-09,3 | ||
|ontology_enrichment_uberon=UBERON:0001723;6.14e-19;3!UBERON:0001033;6.14e-19;3!UBERON:0003343;5.33e-15;4!UBERON:0004785;5.33e-15;4!UBERON:0001911;1.82e-14;4!UBERON:0000974;3.66e-10;6!UBERON:0000165;7.06e-10;28!UBERON:0002110;3.82e-09;3!UBERON:0002294;1.80e-08;7!UBERON:0001173;1.80e-08;7!UBERON:0000161;5.71e-08;19!UBERON:0000166;5.71e-08;19!UBERON:0003729;6.50e-08;13!UBERON:0004913;1.56e-07;1!UBERON:0003703;1.56e-07;1!UBERON:0001174;1.56e-07;1!UBERON:0004914;1.56e-07;1!UBERON:0000964;3.41e-07;4!UBERON:0010409;3.41e-07;4!UBERON:0001831;3.73e-07;1!UBERON:0001567;3.73e-07;1 | |ontology_enrichment_development_v019=UBERON:0008814;1.66e-13;2!UBERON:0010056;1.66e-13;2!CL:0000357;1.51e-09;6!CL:0000114;1.51e-09;6!UBERON:0008801;3.73e-07;1 | ||
|ontology_enrichment_disease=DOID:1749!1.48e-12!14;DOID:305!5.65e-07!106;DOID:4074!7.10e-07!2;DOID:4905!7.10e-07!2;DOID:3498!7.10e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.09e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.00e-11,14;DOID:305,2.31e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000166!9.72e-15!21;UBERON:0000161!3.79e-13!35;UBERON:0000165!1.96e-10!28;UBERON:0000930!1.96e-10!28;UBERON:0001723!5.94e-10!3;UBERON:0001033!5.94e-10!3;UBERON:0010056!5.94e-10!3;UBERON:0001949!2.03e-09!3;UBERON:0003102!2.83e-08!95;UBERON:0003343!6.52e-08!4;UBERON:0004785!6.52e-08!4;UBERON:0001911!1.14e-07!4;UBERON:0005333!1.14e-07!4;UBERON:0008425!1.14e-07!4;UBERON:0005311!1.14e-07!4;UBERON:0001444!1.69e-07!48;UBERON:0001007!2.84e-07!155;UBERON:0001555!2.84e-07!155;UBERON:0007026!2.84e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;6.14e-19;3!UBERON:0001033;6.14e-19;3!UBERON:0003343;5.33e-15;4!UBERON:0004785;5.33e-15;4!UBERON:0001911;1.82e-14;4!UBERON:0000974;3.66e-10;6!UBERON:0000165;7.06e-10;28!UBERON:0002110;3.82e-09;3!UBERON:0002294;1.80e-08;7!UBERON:0001173;1.80e-08;7!UBERON:0000161;5.71e-08;19!UBERON:0000166;5.71e-08;19!UBERON:0003729;6.50e-08;13!UBERON:0004913;1.56e-07;1!UBERON:0003703;1.56e-07;1!UBERON:0001174;1.56e-07;1!UBERON:0004914;1.56e-07;1!UBERON:0000964;3.41e-07;4!UBERON:0010409;3.41e-07;4!UBERON:0001831;3.73e-07;1!UBERON:0001567;3.73e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,7.85e-19,3;UBERON:0001033,7.85e-19,3;UBERON:0010056,7.85e-19,3;UBERON:0003343,4.97e-15,4;UBERON:0004785,4.97e-15,4;UBERON:0001911,1.59e-14,4;UBERON:0005333,1.59e-14,4;UBERON:0008425,1.59e-14,4;UBERON:0005311,1.59e-14,4;UBERON:0000166,9.36e-13,22;UBERON:0000161,2.74e-12,36;UBERON:0003102,9.97e-11,99;UBERON:0000165,1.81e-09,29;UBERON:0000930,1.81e-09,29;UBERON:0000033,3.91e-09,56;UBERON:0002110,3.98e-09,3;UBERON:0006242,3.98e-09,3;UBERON:0001444,1.16e-08,49;UBERON:0000153,4.38e-08,62;UBERON:0007811,4.38e-08,62;UBERON:0003729,6.38e-08,13;UBERON:0004913,1.51e-07,1;UBERON:0003703,1.51e-07,1;UBERON:0001174,1.51e-07,1;UBERON:0004914,1.51e-07,1;UBERON:0000076,1.69e-07,8;UBERON:0005157,2.65e-07,47;UBERON:0000964,3.63e-07,4;UBERON:0010409,3.63e-07,4;UBERON:0004348,3.63e-07,4;UBERON:0005427,3.63e-07,4;UBERON:0001831,4.61e-07,1;UBERON:0001567,4.61e-07,1;UBERON:0008801,4.61e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10013403609559,5.19098219898201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.818238361772504,2.29443676311203,0.243947412259191,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96325770603289,3.37205259772859,1.3068766413512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51183915378974,0,3.94057499892532,1.45316969256981,37.1881198790255,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80455823272956,16.022092074846,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0466488552223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.15436994738562,0,0,0,0,0,0,0,0,1.43246690842614,0.296964680832639,0.307160702099232,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,2.93496928398135,0.728341138602278,0,0,0,0,0,0,0,0,0,0,0,0.970722711091971,0,0.685946781900644,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,5.47543871657448,2.00397050628834,0,0.799238438328521,0,0,0,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.3251905802335,0,0.314408610199332,0,0,0,0,7.66009509324218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,3.21662387062389,0,0,0,0,0,1.23520578864389,0,0,0.964570191354574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05650572386389,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69256767305949,0,21.0942888299931,8.66442496127537,0,0,0,0,0,0,0,0,4.5835386727284,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,19.9322975633324,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70118471424834,1.02669990325584,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10013403609559,5.19098219898201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.818238361772504,2.29443676311203,0.243947412259191,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96325770603289,3.37205259772859,1.3068766413512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51183915378974,0,3.94057499892532,1.45316969256981,37.1881198790255,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80455823272956,16.022092074846,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0466488552223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.15436994738562,0,0,0,0,0,0,0,0,1.43246690842614,0.296964680832639,0.307160702099232,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,2.93496928398135,0.728341138602278,0,0,0,0,0,0,0,0,0,0,0,0.970722711091971,0,0.685946781900644,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,5.47543871657448,2.00397050628834,0,0.799238438328521,0,0,0,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.3251905802335,0,0.314408610199332,0,0,0,0,7.66009509324218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,3.21662387062389,0,0,0,0,0,1.23520578864389,0,0,0.964570191354574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05650572386389,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69256767305949,0,21.0942888299931,8.66442496127537,0,0,0,0,0,0,0,0,4.5835386727284,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,19.9322975633324,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70118471424834,1.02669990325584,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p2@KLK5 | |short_description=p2@KLK5 | ||
}} | }} |
Latest revision as of 13:23, 19 September 2015
Short description: | p2@KLK5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KLK5_5end |
Coexpression cluster: | C2500_Mammary_Prostate_oral_serous_Corneal_Keratinocyte_lung |
Association with transcript: | -9bp_to_ENST00000336334, ENST00000391809, NM_001077491, NM_001077492, NM_012427, uc002pue.2, uc002puf.2, uc002pug.2_5end |
EntrezGene: | KLK5 |
HGNC: | 6366 |
UniProt: | Q9Y337Q53ZR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 4.60e-15 | 14 |
mammary gland epithelial cell | 1.59e-14 | 4 |
epithelial cell | 1.07e-13 | 253 |
corneal epithelial cell | 1.71e-13 | 2 |
epithelial cell of gall bladder | 2.99e-13 | 2 |
squamous epithelial cell | 9.19e-12 | 63 |
keratinocyte | 2.31e-11 | 5 |
ecto-epithelial cell | 3.41e-10 | 34 |
stratified squamous epithelial cell | 1.49e-09 | 6 |
keratin accumulating cell | 1.49e-09 | 6 |
stratified epithelial cell | 1.49e-09 | 6 |
keratinizing barrier epithelial cell | 1.49e-09 | 6 |
epithelial fate stem cell | 1.49e-09 | 6 |
stratified epithelial stem cell | 1.49e-09 | 6 |
surface ectodermal cell | 1.49e-09 | 6 |
epithelial cell of prostate | 3.24e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 7.85e-19 | 3 |
gustatory system | 7.85e-19 | 3 |
future tongue | 7.85e-19 | 3 |
mucosa of oral region | 4.97e-15 | 4 |
respiratory system mucosa | 4.97e-15 | 4 |
mammary gland | 1.59e-14 | 4 |
mammary bud | 1.59e-14 | 4 |
mammary ridge | 1.59e-14 | 4 |
mammary placode | 1.59e-14 | 4 |
oral opening | 9.36e-13 | 22 |
orifice | 2.74e-12 | 36 |
surface structure | 9.97e-11 | 99 |
mouth | 1.81e-09 | 29 |
stomodeum | 1.81e-09 | 29 |
head | 3.91e-09 | 56 |
gallbladder | 3.98e-09 | 3 |
gall bladder primordium | 3.98e-09 | 3 |
subdivision of head | 1.16e-08 | 49 |
anterior region of body | 4.38e-08 | 62 |
craniocervical region | 4.38e-08 | 62 |
mouth mucosa | 6.38e-08 | 13 |
hepatopancreatic ampulla | 1.51e-07 | 1 |
extrahepatic bile duct | 1.51e-07 | 1 |
common bile duct | 1.51e-07 | 1 |
duodenal papilla | 1.51e-07 | 1 |
external ectoderm | 1.69e-07 | 8 |
epithelial fold | 2.65e-07 | 47 |
cornea | 3.63e-07 | 4 |
eye surface | 3.63e-07 | 4 |
optic eminence | 3.63e-07 | 4 |
corneal primordium | 3.63e-07 | 4 |
parotid gland | 4.61e-07 | 1 |
cheek | 4.61e-07 | 1 |
parotid gland primordium | 4.61e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.00e-11 | 14 |
carcinoma | 2.31e-07 | 106 |