FFCP PHASE1:Hg19::chr8:95229543..95229552,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1015 | |EntrezGene=1015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1756 | |HGNC=1756 | ||
|TSSclassifier=strong | |||
|UniProt=Q12864,B2R778 | |UniProt=Q12864,B2R778 | ||
|association_with_transcript=-12bp_to_ENST00000450165,NM_001144663,uc011lgp.1_5end | |||
|cluster_id=chr8:95229543..95229552,- | |||
|description=CAGE_peak_4_at_CDH17_5end | |||
|id=chr8:95229543..95229552,- | |||
|ontology_enrichment_celltype=CL:0000785!1.12e-13!2;CL:0000955!1.12e-13!2;CL:0000818!1.12e-13!2;CL:0000954!1.12e-13!2;CL:0000816!1.12e-13!2;CL:0000817!2.05e-09!3;CL:0002127!4.28e-08!1;CL:0000914!4.28e-08!1;CL:0000911!4.28e-08!1;CL:0000814!4.28e-08!1;CL:0002042!4.28e-08!1;CL:0002039!4.28e-08!1;CL:0002040!4.28e-08!1;CL:0002041!4.28e-08!1;CL:0000819!6.80e-08!1;CL:0000946!1.80e-07!1;CL:0000786!1.80e-07!1;CL:0000980!1.80e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.88e-50;1!CL:0000911;1.88e-50;1!CL:0000814;1.88e-50;1!CL:0000084;5.49e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.46e-50,1;CL:0000914,1.46e-50,1;CL:0000911,1.46e-50,1;CL:0000814,1.46e-50,1;CL:0002042,1.46e-50,1;CL:0002039,1.46e-50,1;CL:0002040,1.46e-50,1;CL:0002041,1.46e-50,1;CL:0000893,4.32e-26,2;CL:0002489,4.32e-26,2;CL:0000809,4.32e-26,2;CL:0000808,4.32e-26,2;CL:0000894,4.32e-26,2;CL:0000806,4.32e-26,2;CL:0000807,4.32e-26,2;CL:0000805,4.32e-26,2;CL:0002425,4.32e-26,2;CL:0000084,5.49e-09,25;CL:0000827,5.49e-09,25 | |||
|ontology_enrichment_development_v019=CL:0002425;4.90e-26;2 | |||
|ontology_enrichment_disease=DOID:0060073!6.80e-08!1;DOID:8675!6.80e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.21e-13;4!DOID:1325;2.26e-08;7!DOID:3904;2.26e-08;7!DOID:3905;8.61e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.13e-13,4;DOID:1325,2.18e-08,7;DOID:3904,2.18e-08,7;DOID:3905,8.37e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.64e-09!3;UBERON:0004854!2.64e-09!3;UBERON:0009034!2.64e-09!3;UBERON:0002095!2.64e-09!3;UBERON:0004782!2.64e-09!3;UBERON:0003281!2.64e-09!3;UBERON:0009664!2.64e-09!3;UBERON:0002296!2.64e-09!3;UBERON:0005602!2.64e-09!3;UBERON:0001179!2.64e-09!3;UBERON:0006293!2.64e-09!3;UBERON:0004177!8.31e-09!7;UBERON:0001154!7.26e-08!1;UBERON:0001153!7.26e-08!1;UBERON:0005409!7.39e-08!35;UBERON:0002372!7.76e-08!1;UBERON:0001961!7.76e-08!1;UBERON:0001744!7.76e-08!1;UBERON:0001735!7.76e-08!1;UBERON:0002146!9.44e-08!1;UBERON:0005623!9.44e-08!1;UBERON:0001301!1.30e-07!1;UBERON:0006834!1.58e-07!1;UBERON:0004921!8.54e-07!129;UBERON:0004185!8.54e-07!129 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.82e-14,4;UBERON:0005058,8.82e-14,4;UBERON:0009113,8.82e-14,4;UBERON:0003295,8.82e-14,4;UBERON:0005562,8.82e-14,4;UBERON:0003351,1.22e-09,6;UBERON:0004177,1.89e-08,7;UBERON:0005057,1.89e-08,7;UBERON:0004807,3.78e-08,28 | |||
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|short_description=p4@CDH17 | |||
}} | }} |
Latest revision as of 12:47, 19 September 2015
Short description: | p4@CDH17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDH17_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000450165, NM_001144663, uc011lgp.1_5end |
EntrezGene: | CDH17 |
HGNC: | 1756 |
UniProt: | Q12864B2R778 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.46e-50 | 1 |
immature NK T cell | 1.46e-50 | 1 |
effector T cell | 1.46e-50 | 1 |
mature NK T cell | 1.46e-50 | 1 |
immature NK T cell stage IV | 1.46e-50 | 1 |
immature NK T cell stage I | 1.46e-50 | 1 |
immature NK T cell stage II | 1.46e-50 | 1 |
immature NK T cell stage III | 1.46e-50 | 1 |
thymocyte | 4.32e-26 | 2 |
double negative thymocyte | 4.32e-26 | 2 |
double-positive, alpha-beta thymocyte | 4.32e-26 | 2 |
DN4 thymocyte | 4.32e-26 | 2 |
DN1 thymic pro-T cell | 4.32e-26 | 2 |
DN2 thymocyte | 4.32e-26 | 2 |
DN3 thymocyte | 4.32e-26 | 2 |
immature single positive thymocyte | 4.32e-26 | 2 |
early T lineage precursor | 4.32e-26 | 2 |
T cell | 5.49e-09 | 25 |
pro-T cell | 5.49e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.82e-14 | 4 |
hemolymphoid system gland | 8.82e-14 | 4 |
thymic region | 8.82e-14 | 4 |
pharyngeal gland | 8.82e-14 | 4 |
thymus primordium | 8.82e-14 | 4 |
pharyngeal epithelium | 1.22e-09 | 6 |
hemopoietic organ | 1.89e-08 | 7 |
immune organ | 1.89e-08 | 7 |
respiratory system epithelium | 3.78e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.13e-13 | 4 |
bronchus cancer | 2.18e-08 | 7 |
bronchogenic carcinoma | 2.18e-08 | 7 |
lung carcinoma | 8.37e-07 | 9 |