FFCP PHASE1:Hg19::chr3:111260936..111260948,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10225 | |EntrezGene=10225 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16892 | |HGNC=16892 | ||
|TSSclassifier=strong | |||
|UniProt=P40200,Q8WUE2,A8K3V4 | |UniProt=P40200,Q8WUE2,A8K3V4 | ||
|association_with_transcript=10bp_to_ENST00000352690,NM_005816,NM_198196,uc003dxv.2,uc003dxw.2,uc003dxx.2,uc010hpy.1_5end | |association_with_transcript=10bp_to_ENST00000352690,NM_005816,NM_198196,uc003dxv.2,uc003dxw.2,uc003dxx.2,uc010hpy.1_5end | ||
|cluster_id=chr3:111260936..111260948,+ | |||
|description=CAGE_peak_4_at_CD96_5end | |description=CAGE_peak_4_at_CD96_5end | ||
|id=chr3:111260936..111260948,+ | |id=chr3:111260936..111260948,+ | ||
|ontology_enrichment_celltype=CL:0000084!3.60e-39!25;CL:0000827!3.60e-39!25;CL:0000791!7.39e-31!18;CL:0000789!7.39e-31!18;CL:0002420!7.39e-31!18;CL:0002419!7.39e-31!18;CL:0000790!7.39e-31!18;CL:0000838!1.33e-29!52;CL:0000542!7.40e-29!53;CL:0000051!7.40e-29!53;CL:0000988!1.39e-19!182;CL:0000625!3.88e-18!11;CL:0000037!8.90e-18!172;CL:0000566!8.90e-18!172;CL:0002032!3.81e-15!165;CL:0000837!3.81e-15!165;CL:0002087!1.60e-13!119;CL:0000738!1.63e-12!140;CL:0000624!2.54e-12!6;CL:0000080!5.99e-11!6;CL:0002031!5.79e-10!124;CL:0000898!4.69e-07!3;CL:0000623!6.22e-07!3;CL:0000825!6.22e-07!3 | |ontology_enrichment_celltype=CL:0000084!3.60e-39!25;CL:0000827!3.60e-39!25;CL:0000791!7.39e-31!18;CL:0000789!7.39e-31!18;CL:0002420!7.39e-31!18;CL:0002419!7.39e-31!18;CL:0000790!7.39e-31!18;CL:0000838!1.33e-29!52;CL:0000542!7.40e-29!53;CL:0000051!7.40e-29!53;CL:0000988!1.39e-19!182;CL:0000625!3.88e-18!11;CL:0000037!8.90e-18!172;CL:0000566!8.90e-18!172;CL:0002032!3.81e-15!165;CL:0000837!3.81e-15!165;CL:0002087!1.60e-13!119;CL:0000738!1.63e-12!140;CL:0000624!2.54e-12!6;CL:0000080!5.99e-11!6;CL:0002031!5.79e-10!124;CL:0000898!4.69e-07!3;CL:0000623!6.22e-07!3;CL:0000825!6.22e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000084;4.22e-43;25!CL:0000791;1.12e-38;18!CL:0000789;1.12e-38;18!CL:0002419;1.12e-38;18!CL:0000625;2.38e-22;11!CL:0000542;1.71e-13;53!CL:0000624;1.96e-13;6!CL:0000898;1.51e-07;3!CL:0000623;1.51e-07;3!CL:0002127;6.06e-07;1!CL:0000911;6.06e-07;1!CL:0000814;6.06e-07;1 | |ontology_enrichment_celltype_v019=CL:0000084;4.22e-43;25!CL:0000791;1.12e-38;18!CL:0000789;1.12e-38;18!CL:0002419;1.12e-38;18!CL:0000625;2.38e-22;11!CL:0000542;1.71e-13;53!CL:0000624;1.96e-13;6!CL:0000898;1.51e-07;3!CL:0000623;1.51e-07;3!CL:0002127;6.06e-07;1!CL:0000911;6.06e-07;1!CL:0000814;6.06e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.66e-43,25;CL:0000827,1.66e-43,25;CL:0000791,5.14e-39,18;CL:0000789,5.14e-39,18;CL:0002420,5.14e-39,18;CL:0002419,5.14e-39,18;CL:0000790,5.14e-39,18;CL:0000838,6.95e-25,52;CL:0000542,2.41e-24,53;CL:0000051,2.41e-24,53;CL:0000625,2.00e-22,11;CL:0000624,1.11e-13,6;CL:0000893,1.42e-11,2;CL:0002489,1.42e-11,2;CL:0000809,1.42e-11,2;CL:0000808,1.42e-11,2;CL:0000894,1.42e-11,2;CL:0000806,1.42e-11,2;CL:0000807,1.42e-11,2;CL:0000805,1.42e-11,2;CL:0002425,1.42e-11,2;CL:0000037,5.10e-11,168;CL:0000738,1.46e-10,136;CL:0002087,2.26e-10,115;CL:0000988,3.27e-10,177;CL:0002032,2.41e-09,161;CL:0000837,2.41e-09,161;CL:0002031,1.35e-08,120;CL:0000898,1.19e-07,3;CL:0000623,1.73e-07,3;CL:0000825,1.73e-07,3;CL:0002127,5.90e-07,1;CL:0000914,5.90e-07,1;CL:0000911,5.90e-07,1;CL:0000814,5.90e-07,1;CL:0002042,5.90e-07,1;CL:0002039,5.90e-07,1;CL:0002040,5.90e-07,1;CL:0002041,5.90e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;1.12e-38;18!CL:0000051;1.71e-13;53!CL:0002425;1.50e-11;2 | |ontology_enrichment_development_v019=CL:0000790;1.12e-38;18!CL:0000051;1.71e-13;53!CL:0002425;1.50e-11;2 | ||
|ontology_enrichment_disease=DOID:2531!4.13e-14!51;DOID:0060083!4.13e-14!51;DOID:1240!1.57e-11!39 | |ontology_enrichment_disease=DOID:2531!4.13e-14!51;DOID:0060083!4.13e-14!51;DOID:1240!1.57e-11!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.47e-18!15;UBERON:0000179!1.47e-18!15;UBERON:0000463!1.47e-18!15;UBERON:0004177!3.56e-10!7;UBERON:0002370!1.35e-09!4;UBERON:0005058!1.35e-09!4;UBERON:0009113!1.35e-09!4;UBERON:0003295!1.35e-09!4;UBERON:0005562!1.35e-09!4 | |ontology_enrichment_uberon=UBERON:0000178!1.47e-18!15;UBERON:0000179!1.47e-18!15;UBERON:0000463!1.47e-18!15;UBERON:0004177!3.56e-10!7;UBERON:0002370!1.35e-09!4;UBERON:0005058!1.35e-09!4;UBERON:0009113!1.35e-09!4;UBERON:0003295!1.35e-09!4;UBERON:0005562!1.35e-09!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.06e-12;2!UBERON:0005058;6.06e-12;2!UBERON:0009113;6.06e-12;2 | |ontology_enrichment_uberon_v019=UBERON:0002370;6.06e-12;2!UBERON:0005058;6.06e-12;2!UBERON:0009113;6.06e-12;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.36e-22,4;UBERON:0005058,9.36e-22,4;UBERON:0009113,9.36e-22,4;UBERON:0003295,9.36e-22,4;UBERON:0005562,9.36e-22,4;UBERON:0003351,1.48e-14,6;UBERON:0004177,1.71e-12,7;UBERON:0005057,1.71e-12,7;UBERON:0000974,9.12e-09,10;UBERON:0003408,9.12e-09,10;UBERON:0001042,9.12e-09,10;UBERON:0009145,9.12e-09,10;UBERON:0006562,5.66e-08,11;UBERON:0009722,5.66e-08,11;UBERON:0007690,5.66e-08,11 | |||
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|short_description=p4@CD96 | |short_description=p4@CD96 | ||
}} | }} |
Latest revision as of 12:32, 19 September 2015
Short description: | p4@CD96 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CD96_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000352690, NM_005816, NM_198196, uc003dxv.2, uc003dxw.2, uc003dxx.2, uc010hpy.1_5end |
EntrezGene: | CD96 |
HGNC: | 16892 |
UniProt: | P40200Q8WUE2A8K3V4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 9.36e-22 | 4 |
hemolymphoid system gland | 9.36e-22 | 4 |
thymic region | 9.36e-22 | 4 |
pharyngeal gland | 9.36e-22 | 4 |
thymus primordium | 9.36e-22 | 4 |
pharyngeal epithelium | 1.48e-14 | 6 |
hemopoietic organ | 1.71e-12 | 7 |
immune organ | 1.71e-12 | 7 |
neck | 9.12e-09 | 10 |
gland of gut | 9.12e-09 | 10 |
chordate pharynx | 9.12e-09 | 10 |
pharyngeal region of foregut | 9.12e-09 | 10 |
pharynx | 5.66e-08 | 11 |
entire pharyngeal arch endoderm | 5.66e-08 | 11 |
early pharyngeal endoderm | 5.66e-08 | 11 |