FFCP PHASE1:Hg19::chr3:11034403..11034492,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6529 | |EntrezGene=6529 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11042 | |HGNC=11042 | ||
|TSSclassifier=strong | |||
|UniProt=P30531,C9J5P8 | |UniProt=P30531,C9J5P8 | ||
|association_with_transcript=0bp_to_ENST00000287766,ENST00000425938,ENST00000462473,NM_003042,uc010hdq.2_5end | |association_with_transcript=0bp_to_ENST00000287766,ENST00000425938,ENST00000462473,NM_003042,uc010hdq.2_5end | ||
|cluster_id=chr3:11034403..11034492,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SLC6A1_5end | |description=CAGE_peak_1_at_SLC6A1_5end | ||
|id=chr3:11034403..11034492,+ | |id=chr3:11034403..11034492,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.04e-16;82!UBERON:0002532;4.05e-07;206!UBERON:0010316;4.05e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;1.83e-40;34!UBERON:0003528;4.05e-40;34!UBERON:0002020;4.05e-40;34!UBERON:0001869;5.58e-40;32!UBERON:0002791;8.42e-40;32!UBERON:0002780;1.23e-38;41!UBERON:0001890;1.23e-38;41!UBERON:0000073;1.86e-37;53!UBERON:0002616;1.86e-37;53!UBERON:0002619;3.44e-36;22!UBERON:0000956;1.50e-33;25!UBERON:0000203;1.50e-33;25!UBERON:0001950;2.82e-33;20!UBERON:0001017;9.70e-30;75!UBERON:0000955;8.53e-28;68!UBERON:0001016;4.14e-24;83!UBERON:0007023;1.36e-20;114!UBERON:0002420;2.93e-15;9!UBERON:0007245;2.93e-15;9!UBERON:0010009;2.93e-15;9!UBERON:0010011;2.93e-15;9!UBERON:0000454;2.93e-15;9!UBERON:0000125;3.24e-15;9!UBERON:0002308;3.24e-15;9!UBERON:0004732;4.19e-14;13!UBERON:0004733;1.56e-12;12!UBERON:0002028;1.56e-12;12!UBERON:0009663;3.01e-12;7!UBERON:0001871;1.14e-11;6!UBERON:0011216;6.38e-11;132!UBERON:0000200;6.65e-11;6!UBERON:0002298;2.53e-10;6!UBERON:0002021;2.41e-09;5!UBERON:0001872;3.17e-09;5!UBERON:0000349;3.72e-09;5!UBERON:0002680;1.73e-08;9!UBERON:0001895;1.73e-08;9!UBERON:0000922;2.34e-08;49!UBERON:0001894;2.76e-08;7!UBERON:0000369;6.68e-08;4!UBERON:0002435;6.68e-08;4!UBERON:0000204;6.68e-08;4!UBERON:0002784;4.43e-07;4!UBERON:0005284;5.98e-07;5!UBERON:0010314;7.63e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.43e-77,81;UBERON:0007023,1.64e-76,114;UBERON:0001049,4.49e-71,56;UBERON:0005068,4.49e-71,56;UBERON:0006241,4.49e-71,56;UBERON:0007135,4.49e-71,56;UBERON:0001016,1.17e-69,89;UBERON:0000073,2.60e-66,53;UBERON:0002616,2.60e-66,53;UBERON:0000955,5.05e-66,68;UBERON:0006238,5.05e-66,68;UBERON:0002780,1.18e-54,41;UBERON:0001890,1.18e-54,41;UBERON:0003080,1.18e-54,41;UBERON:0006240,1.18e-54,41;UBERON:0003075,3.72e-53,82;UBERON:0007284,3.72e-53,82;UBERON:0002346,8.23e-50,86;UBERON:0001893,9.35e-48,34;UBERON:0003528,1.69e-47,34;UBERON:0002020,1.69e-47,34;UBERON:0001869,1.16e-44,32;UBERON:0002791,2.03e-44,32;UBERON:0011216,4.88e-41,223;UBERON:0010371,2.16e-39,104;UBERON:0003056,1.08e-36,61;UBERON:0002619,3.52e-36,22;UBERON:0010314,6.33e-36,132;UBERON:0004121,2.65e-35,171;UBERON:0000924,2.65e-35,171;UBERON:0006601,2.65e-35,171;UBERON:0000956,1.35e-33,25;UBERON:0000203,1.35e-33,25;UBERON:0001950,2.91e-33,20;UBERON:0000025,6.57e-22,192;UBERON:0004111,4.30e-19,240;UBERON:0003076,7.59e-17,15;UBERON:0003057,7.59e-17,15;UBERON:0002420,2.89e-15,9;UBERON:0007245,2.89e-15,9;UBERON:0010009,2.89e-15,9;UBERON:0010011,2.89e-15,9;UBERON:0000454,2.89e-15,9;UBERON:0000125,3.25e-15,9;UBERON:0002308,3.25e-15,9;UBERON:0004732,4.03e-14,13;UBERON:0000119,1.11e-13,309;UBERON:0000483,7.08e-13,306;UBERON:0004733,1.49e-12,12;UBERON:0002028,1.49e-12,12;UBERON:0007277,1.49e-12,12;UBERON:0009663,3.02e-12,7;UBERON:0002050,1.08e-11,564;UBERON:0001871,1.17e-11,6;UBERON:0000923,1.95e-11,560;UBERON:0010316,1.95e-11,560;UBERON:0005291,1.95e-11,560;UBERON:0006598,1.95e-11,560;UBERON:0010317,1.95e-11,560;UBERON:0002532,1.95e-11,560;UBERON:0005423,5.66e-11,581;UBERON:0000200,6.72e-11,6;UBERON:0000922,9.12e-11,592;UBERON:0002298,2.55e-10,6;UBERON:0002021,2.43e-09,5;UBERON:0001872,3.18e-09,5;UBERON:0000349,3.63e-09,5;UBERON:0002680,1.66e-08,9;UBERON:0001895,1.66e-08,9;UBERON:0010092,1.66e-08,9;UBERON:0001894,2.89e-08,7;UBERON:0006222,2.89e-08,7;UBERON:0000369,6.69e-08,4;UBERON:0002435,6.69e-08,4;UBERON:0000204,6.69e-08,4;UBERON:0010082,6.69e-08,4;UBERON:0002784,4.50e-07,4;UBERON:0005284,7.59e-07,5 | |||
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|short_description=p1@SLC6A1 | |short_description=p1@SLC6A1 | ||
}} | }} |
Latest revision as of 12:10, 19 September 2015
Short description: | p1@SLC6A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC6A1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000287766, ENST00000425938, ENST00000462473, NM_003042, uc010hdq.2_5end |
EntrezGene: | SLC6A1 |
HGNC: | 11042 |
UniProt: | P30531C9J5P8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data