FFCP PHASE1:Hg19::chr8:93107726..93107744,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:93107726..93107744,-
|short_description=p21@RUNX1T1
|description=CAGE_peak_21_at_RUNX1T1_5end
|association_with_transcript=0bp_to_ENST00000520974_5end
|En...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=862 | |EntrezGene=862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1535 | |HGNC=1535 | ||
|TSSclassifier=strong | |||
|UniProt=E7ERJ9 | |UniProt=E7ERJ9 | ||
|association_with_transcript=0bp_to_ENST00000520974_5end | |||
|cluster_id=chr8:93107726..93107744,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_21_at_RUNX1T1_5end | |||
|id=chr8:93107726..93107744,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;9.67e-10;6!CL:0000404;9.67e-10;6!CL:0002535;5.37e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.06e-09,6;CL:0000031,1.06e-09,6;CL:0000404,1.06e-09,6;CL:0002535,5.37e-08,2;CL:0000047,1.70e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.31e-18;3!UBERON:0006242;2.11e-14;1!CL:0000031;9.67e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.21e-26!115;UBERON:0001017!1.27e-22!82;UBERON:0005743!2.42e-22!86;UBERON:0000073!1.38e-20!94;UBERON:0001016!1.38e-20!94;UBERON:0001049!2.52e-20!57;UBERON:0005068!2.52e-20!57;UBERON:0006241!2.52e-20!57;UBERON:0007135!2.52e-20!57;UBERON:0001869!1.37e-19!32;UBERON:0002619!2.09e-19!22;UBERON:0001950!4.23e-19!20;UBERON:0000955!5.08e-19!69;UBERON:0006238!5.08e-19!69;UBERON:0001893!4.12e-18!34;UBERON:0002020!5.45e-18!34;UBERON:0003528!5.45e-18!34;UBERON:0002616!6.92e-18!59;UBERON:0002780!3.18e-17!41;UBERON:0001890!3.18e-17!41;UBERON:0006240!3.18e-17!41;UBERON:0002791!5.99e-17!33;UBERON:0003080!1.15e-16!42;UBERON:0000956!1.35e-16!25;UBERON:0000203!1.35e-16!25;UBERON:0003075!1.80e-13!86;UBERON:0007284!1.80e-13!86;UBERON:0002346!1.75e-12!90;UBERON:0000153!6.47e-12!129;UBERON:0007811!6.47e-12!129;UBERON:0003056!1.25e-11!61;UBERON:0000033!2.99e-11!123;UBERON:0004121!8.81e-11!169;UBERON:0000924!2.89e-10!173;UBERON:0006601!2.89e-10!173;UBERON:0001871!7.60e-08!7;UBERON:0000200!5.36e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.15e-11;5!UBERON:0001950;1.57e-10;20!UBERON:0002037;1.15e-09;6!UBERON:0002619;1.23e-09;22!UBERON:0000956;1.51e-08;25!UBERON:0000203;1.51e-08;25!UBERON:0006955;5.37e-08;2!UBERON:0004801;5.37e-08;2!UBERON:0000955;7.15e-07;68!UBERON:0002680;9.93e-07;9!UBERON:0001895;9.93e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.66e-13,89;UBERON:0001017,5.28e-12,81;UBERON:0002021,1.09e-11,5;UBERON:0001950,1.53e-10,20;UBERON:0002037,1.21e-09,6;UBERON:0006215,1.21e-09,6;UBERON:0002619,1.21e-09,22;UBERON:0000955,8.67e-09,68;UBERON:0006238,8.67e-09,68;UBERON:0000073,1.40e-08,53;UBERON:0002616,1.40e-08,53;UBERON:0000956,1.48e-08,25;UBERON:0000203,1.48e-08,25;UBERON:0001049,4.14e-08,56;UBERON:0005068,4.14e-08,56;UBERON:0006241,4.14e-08,56;UBERON:0007135,4.14e-08,56;UBERON:0006955,5.37e-08,2;UBERON:0004801,5.37e-08,2;UBERON:0002791,8.83e-07,32;UBERON:0001869,8.83e-07,32 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0.673588117878509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0,0,0.276149695926898,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31986643833309,0.670065061337395,1.27587750330633,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,3.77899121781414,0,0,0,0,0,0,0.690503839458535,0,0,0,0,5.98841394003583,0,0,0,0,0,0,0,0,0.868124974666461,0,0,0,1.65868889896837,1.18219047581419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,9.48825561054519,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0.189932387867636,0,0,1.28071796843612,0,0,0,0.343189995723929,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.272406812223151,0,0.550157746388935,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.320362237703084,0.78602152549833,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0,0.332787154610557,0.124192805882767,0.138348634936231,0,0,0,0,0.936669811613763,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0.622077260032973,1.79052119825112,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.578063025868136,1.41696576325585,0.159633859057151,0.41023272848151,16.8888036468551,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.443910671357348,7.11067251723685,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.339848664884159,0.131545547125698,0,0,0.470958557103084,0.314231179832004,0,0.913158720509496,0,0,0.142953088353313,0.158013611732727,0,0.173858272302579,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,4.3769170535501,0,0,0,0,0.154348316215889,0.218559560503957,1.41095188908457,0.735444965261716,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.203974470572744,10.4724165681691,0.5290268405154,0,0,0,0,0,0,0,0,0.459474497674225,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0.476128862927481,0,0,0,0.12729431655633,0,0.217716747896961,0.342233301085281,0.134704106029175,0.215166616178029,0.665320713092027,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0.673588117878509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0,0,0.276149695926898,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31986643833309,0.670065061337395,1.27587750330633,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,3.77899121781414,0,0,0,0,0,0,0.690503839458535,0,0,0,0,5.98841394003583,0,0,0,0,0,0,0,0,0.868124974666461,0,0,0,1.65868889896837,1.18219047581419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,9.48825561054519,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0.189932387867636,0,0,1.28071796843612,0,0,0,0.343189995723929,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.272406812223151,0,0.550157746388935,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.320362237703084,0.78602152549833,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0,0.332787154610557,0.124192805882767,0.138348634936231,0,0,0,0,0.936669811613763,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0.622077260032973,1.79052119825112,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.578063025868136,1.41696576325585,0.159633859057151,0.41023272848151,16.8888036468551,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.443910671357348,7.11067251723685,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.339848664884159,0.131545547125698,0,0,0.470958557103084,0.314231179832004,0,0.913158720509496,0,0,0.142953088353313,0.158013611732727,0,0.173858272302579,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,4.3769170535501,0,0,0,0,0.154348316215889,0.218559560503957,1.41095188908457,0.735444965261716,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.203974470572744,10.4724165681691,0.5290268405154,0,0,0,0,0,0,0,0,0.459474497674225,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0.476128862927481,0,0,0,0.12729431655633,0,0.217716747896961,0.342233301085281,0.134704106029175,0.215166616178029,0.665320713092027,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | ||
|short_description=p21@RUNX1T1 | |||
}} | }} |
Latest revision as of 11:51, 19 September 2015
Short description: | p21@RUNX1T1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_RUNX1T1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000520974_5end |
EntrezGene: | RUNX1T1 |
HGNC: | 1535 |
UniProt: | E7ERJ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.06e-09 | 6 |
neuroblast | 1.06e-09 | 6 |
electrically signaling cell | 1.06e-09 | 6 |
epithelial cell of cervix | 5.37e-08 | 2 |
neuronal stem cell | 1.70e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.66e-13 | 89 |
central nervous system | 5.28e-12 | 81 |
occipital lobe | 1.09e-11 | 5 |
neocortex | 1.53e-10 | 20 |
cerebellum | 1.21e-09 | 6 |
rhombic lip | 1.21e-09 | 6 |
regional part of cerebral cortex | 1.21e-09 | 22 |
brain | 8.67e-09 | 68 |
future brain | 8.67e-09 | 68 |
regional part of nervous system | 1.40e-08 | 53 |
regional part of brain | 1.40e-08 | 53 |
cerebral cortex | 1.48e-08 | 25 |
pallium | 1.48e-08 | 25 |
neural tube | 4.14e-08 | 56 |
neural rod | 4.14e-08 | 56 |
future spinal cord | 4.14e-08 | 56 |
neural keel | 4.14e-08 | 56 |
uterine epithelium | 5.37e-08 | 2 |
cervix epithelium | 5.37e-08 | 2 |
regional part of telencephalon | 8.83e-07 | 32 |
cerebral hemisphere | 8.83e-07 | 32 |