FFCP PHASE1:Hg19::chr4:987217..987231,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10861 | |EntrezGene=10861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10993 | |HGNC=10993 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2B4 | |UniProt=Q9H2B4 | ||
|association_with_transcript=0bp_to_ENST00000361661,ENST00000398516,NM_213613,uc003gbx.2,uc003gcb.2,uc003gcc.2_5end | |association_with_transcript=0bp_to_ENST00000361661,ENST00000398516,NM_213613,uc003gbx.2,uc003gcb.2,uc003gcc.2_5end | ||
|cluster_id=chr4:987217..987231,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_2_at_SLC26A1_5end | |description=CAGE_peak_2_at_SLC26A1_5end | ||
|id=chr4:987217..987231,- | |id=chr4:987217..987231,- | ||
|ontology_enrichment_celltype=CL:0000181!1.47e-25!12;CL:0000417!1.47e-25!12;CL:0000668!1.47e-25!12;CL:0000414!1.47e-25!12;CL:0000412!1.47e-25!12;CL:0000182!1.47e-25!12;CL:0000159!1.72e-10!2;CL:0000223!1.93e-09!59;CL:0000066!3.01e-08!254 | |ontology_enrichment_celltype=CL:0000181!1.47e-25!12;CL:0000417!1.47e-25!12;CL:0000668!1.47e-25!12;CL:0000414!1.47e-25!12;CL:0000412!1.47e-25!12;CL:0000182!1.47e-25!12;CL:0000159!1.72e-10!2;CL:0000223!1.93e-09!59;CL:0000066!3.01e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.47e-61;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.30e-61,12;CL:0000223,2.57e-15,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.82e-51;11!UBERON:0009497;1.71e-43;13!UBERON:0003104;3.29e-29;31!UBERON:0001041;1.40e-18;30!CL:0000223;3.27e-10;58 | |||
|ontology_enrichment_disease=DOID:305!1.49e-11!106;DOID:0050687!1.62e-08!143;DOID:7!2.04e-08!39;DOID:299!3.39e-08!25 | |ontology_enrichment_disease=DOID:305!1.49e-11!106;DOID:0050687!1.62e-08!143;DOID:7!2.04e-08!39;DOID:299!3.39e-08!25 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.09e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0009497!4.90e-26!25;UBERON:0000015!4.90e-26!25;UBERON:0002423!4.90e-26!25;UBERON:0006235!4.90e-26!25;UBERON:0004161!4.90e-26!25;UBERON:0008835!2.38e-25!22;UBERON:0003894!2.38e-25!22;UBERON:0002107!1.29e-24!19;UBERON:0006925!1.29e-24!19;UBERON:0008836!1.29e-24!19;UBERON:0009854!3.79e-24!23;UBERON:0007499!4.97e-22!25;UBERON:0009856!4.30e-21!26;UBERON:0005172!4.75e-19!55;UBERON:0005173!4.75e-19!55;UBERON:0005057!1.90e-17!26;UBERON:0002365!3.01e-17!31;UBERON:0002330!3.01e-17!31;UBERON:0003929!5.79e-17!54;UBERON:0002417!8.20e-17!61;UBERON:0000916!8.20e-17!61;UBERON:0005911!8.00e-15!82;UBERON:0009569!9.21e-14!113;UBERON:0002368!1.89e-12!35;UBERON:0005177!8.24e-12!107;UBERON:0004921!2.16e-11!129;UBERON:0004185!2.16e-11!129;UBERON:0001007!9.66e-10!155;UBERON:0001555!9.66e-10!155;UBERON:0007026!9.66e-10!155;UBERON:0002530!1.36e-09!59;UBERON:0000949!3.01e-09!45;UBERON:0004119!1.53e-08!169;UBERON:0000925!1.53e-08!169;UBERON:0006595!1.53e-08!169;UBERON:0000466!3.11e-08!126;UBERON:0002100!3.13e-07!216;UBERON:0000077!6.98e-07!130 | |ontology_enrichment_uberon=UBERON:0009497!4.90e-26!25;UBERON:0000015!4.90e-26!25;UBERON:0002423!4.90e-26!25;UBERON:0006235!4.90e-26!25;UBERON:0004161!4.90e-26!25;UBERON:0008835!2.38e-25!22;UBERON:0003894!2.38e-25!22;UBERON:0002107!1.29e-24!19;UBERON:0006925!1.29e-24!19;UBERON:0008836!1.29e-24!19;UBERON:0009854!3.79e-24!23;UBERON:0007499!4.97e-22!25;UBERON:0009856!4.30e-21!26;UBERON:0005172!4.75e-19!55;UBERON:0005173!4.75e-19!55;UBERON:0005057!1.90e-17!26;UBERON:0002365!3.01e-17!31;UBERON:0002330!3.01e-17!31;UBERON:0003929!5.79e-17!54;UBERON:0002417!8.20e-17!61;UBERON:0000916!8.20e-17!61;UBERON:0005911!8.00e-15!82;UBERON:0009569!9.21e-14!113;UBERON:0002368!1.89e-12!35;UBERON:0005177!8.24e-12!107;UBERON:0004921!2.16e-11!129;UBERON:0004185!2.16e-11!129;UBERON:0001007!9.66e-10!155;UBERON:0001555!9.66e-10!155;UBERON:0007026!9.66e-10!155;UBERON:0002530!1.36e-09!59;UBERON:0000949!3.01e-09!45;UBERON:0004119!1.53e-08!169;UBERON:0000925!1.53e-08!169;UBERON:0006595!1.53e-08!169;UBERON:0000466!3.11e-08!126;UBERON:0002100!3.13e-07!216;UBERON:0000077!6.98e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.25e-60;19!UBERON:0006925;1.25e-60;19!UBERON:0002423;7.79e-46;25!UBERON:0002365;7.62e-36;31!UBERON:0002330;7.62e-36;31!UBERON:0002368;3.53e-31;33!UBERON:0005172;4.46e-20;52!UBERON:0005173;4.46e-20;52!UBERON:0000949;1.54e-19;43!UBERON:0002417;2.22e-14;58!UBERON:0000916;2.22e-14;58!UBERON:0002530;7.50e-11;57!UBERON:0001007;8.48e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.14e-60,19;UBERON:0006925,1.14e-60,19;UBERON:0008836,1.14e-60,19;UBERON:0008835,2.93e-52,22;UBERON:0003894,2.93e-52,22;UBERON:0009854,6.07e-50,23;UBERON:0007499,7.27e-46,25;UBERON:0009497,7.27e-46,25;UBERON:0000015,7.27e-46,25;UBERON:0002423,7.27e-46,25;UBERON:0006235,7.27e-46,25;UBERON:0004161,7.27e-46,25;UBERON:0009856,4.63e-44,26;UBERON:0002365,8.81e-37,31;UBERON:0002330,8.81e-37,31;UBERON:0002368,1.88e-32,35;UBERON:0005172,8.92e-30,54;UBERON:0005173,8.92e-30,54;UBERON:0002417,1.19e-26,60;UBERON:0000916,1.19e-26,60;UBERON:0000949,5.48e-25,45;UBERON:0003929,1.26e-20,54;UBERON:0002530,8.92e-19,59;UBERON:0005177,3.30e-15,101;UBERON:0009569,1.48e-13,112;UBERON:0005911,3.68e-13,82;UBERON:0001041,2.49e-12,87;UBERON:0004921,1.51e-10,118;UBERON:0003104,5.40e-09,160;UBERON:0009142,5.40e-09,160;UBERON:0003914,7.81e-09,117;UBERON:0005256,2.04e-08,122;UBERON:0001007,2.57e-08,145;UBERON:0001555,2.57e-08,145;UBERON:0007026,2.57e-08,145;UBERON:0004119,2.12e-07,160;UBERON:0000925,2.12e-07,160;UBERON:0006595,2.12e-07,160;UBERON:0002100,6.76e-07,199 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,4.91413608338813,10.6342183202653,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895105873378046,0,0,0,0,0,0,0,0.260427761085233,0.437299999980979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0.282706142867882,0,0,0.796118080530053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42304773014896,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,2.44227865152393,2.80213918495966,2.62873821031321,1.67326718575073,0,0,0,0,0,0,0,0,0,0,1.49730843868477,2.46536564234491,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,6.00864158080138,7.95041333473328,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.894843454382338,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0.150962843566674,1.62065732026684,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,4.91413608338813,10.6342183202653,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895105873378046,0,0,0,0,0,0,0,0.260427761085233,0.437299999980979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0.282706142867882,0,0,0.796118080530053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42304773014896,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,2.44227865152393,2.80213918495966,2.62873821031321,1.67326718575073,0,0,0,0,0,0,0,0,0,0,1.49730843868477,2.46536564234491,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,6.00864158080138,7.95041333473328,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.894843454382338,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0.150962843566674,1.62065732026684,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@SLC26A1 | |short_description=p2@SLC26A1 | ||
}} | }} |
Latest revision as of 11:18, 19 September 2015
Short description: | p2@SLC26A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC26A1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000361661, ENST00000398516, NM_213613, uc003gbx.2, uc003gcb.2, uc003gcc.2_5end |
EntrezGene: | SLC26A1 |
HGNC: | 10993 |
UniProt: | Q9H2B4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.30e-61 | 12 |
endodermal cell | 2.57e-15 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.09e-07 | 39 |