FFCP PHASE1:Hg19::chr1:193090923..193090934,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:193090923..193090934,+
|short_description=p8@CDC73
|description=CAGE_peak_8_at_CDC73_5end
|association_with_transcript=-153bp_to_NM_024529,uc001gtb.2_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79577 | |EntrezGene=79577 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16783 | |HGNC=16783 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P1J9 | |UniProt=Q6P1J9 | ||
|association_with_transcript=-153bp_to_NM_024529,uc001gtb.2_5end | |||
|cluster_id=chr1:193090923..193090934,+ | |||
|description=CAGE_peak_8_at_CDC73_5end | |||
|id=chr1:193090923..193090934,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.29e-22;7!CL:0000586;3.29e-22;7!CL:0002322;2.22e-11;5!CL:0000775;2.69e-09;3!CL:0000167;2.49e-07;1!CL:0000164;2.49e-07;1!CL:0000502;2.49e-07;1!CL:0000172;2.49e-07;1!CL:0000173;2.49e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.60e-22,7;CL:0000586,1.60e-22,7;CL:0002322,4.38e-11,5;CL:0000775,2.15e-09,3;CL:0000167,2.66e-07,1;CL:0000164,2.66e-07,1;CL:0000502,2.66e-07,1;CL:0000172,2.66e-07,1;CL:0000173,2.66e-07,1;CL:0002351,2.66e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.14e-10;10!UBERON:0005564;4.14e-10;10!CL:0002351;2.49e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;1.22e-09;22!DOID:2994;1.22e-09;22!DOID:1799;2.49e-07;1!DOID:10165;2.49e-07;1!DOID:3371;2.49e-07;1!DOID:4549;2.49e-07;1!DOID:5861;2.49e-07;1!DOID:6496;2.49e-07;1!DOID:1798;2.49e-07;1!DOID:4430;2.49e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,9.54e-10,22;DOID:2994,9.54e-10,22;DOID:4430,2.66e-07,1;DOID:3371,3.20e-07,1;DOID:4549,3.20e-07,1;DOID:5861,3.20e-07,1;DOID:6496,3.20e-07,1;DOID:1799,4.09e-07,1;DOID:10165,4.09e-07,1;DOID:1798,4.09e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.32e-12;8!UBERON:0003135;3.36e-09;11!UBERON:0002171;2.49e-07;1!UBERON:0006518;2.49e-07;1!UBERON:0008949;2.49e-07;1!UBERON:0000101;2.49e-07;1!UBERON:0002167;2.49e-07;1!UBERON:0003101;8.43e-07;22!UBERON:0000079;8.43e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.42e-13,8;UBERON:0003135,2.44e-09,11;UBERON:0002171,2.07e-07,1;UBERON:0006518,2.07e-07,1;UBERON:0008949,2.07e-07,1;UBERON:0000101,2.07e-07,1;UBERON:0002167,2.07e-07,1;UBERON:0003101,7.43e-07,22;UBERON:0000079,7.43e-07,22 | |||
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| ||
|short_description=p8@CDC73 | |||
}} | }} |
Latest revision as of 11:06, 19 September 2015
Short description: | p8@CDC73 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CDC73_5end |
Coexpression cluster: | NA |
Association with transcript: | -153bp_to_NM_024529, uc001gtb.2_5end |
EntrezGene: | CDC73 |
HGNC: | 16783 |
UniProt: | Q6P1J9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.60e-22 | 7 |
germ cell | 1.60e-22 | 7 |
embryonic stem cell | 4.38e-11 | 5 |
neutrophil | 2.15e-09 | 3 |
peptide hormone secreting cell | 2.66e-07 | 1 |
enteroendocrine cell | 2.66e-07 | 1 |
type D enteroendocrine cell | 2.66e-07 | 1 |
somatostatin secreting cell | 2.66e-07 | 1 |
pancreatic D cell | 2.66e-07 | 1 |
progenitor cell of endocrine pancreas | 2.66e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 8.42e-13 | 8 |
male reproductive organ | 2.44e-09 | 11 |
lower lobe of right lung | 2.07e-07 | 1 |
right lung lobe | 2.07e-07 | 1 |
lower lobe of lung | 2.07e-07 | 1 |
lobe of lung | 2.07e-07 | 1 |
right lung | 2.07e-07 | 1 |
male organism | 7.43e-07 | 22 |
male reproductive system | 7.43e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 9.54e-10 | 22 |
germ cell cancer | 9.54e-10 | 22 |
somatostatinoma | 2.66e-07 | 1 |
chondrosarcoma | 3.20e-07 | 1 |
extraosseous chondrosarcoma | 3.20e-07 | 1 |
myxoid chondrosarcoma | 3.20e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 3.20e-07 | 1 |
islet cell tumor | 4.09e-07 | 1 |
endocrine pancreas cancer | 4.09e-07 | 1 |
pancreatic endocrine carcinoma | 4.09e-07 | 1 |