FFCP PHASE1:Hg19::chr12:56623816..56623825,+: Difference between revisions
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|id=chr12:56623816..56623825,+
|short_description=p4@SLC39A5
|description=CAGE_peak_4_at_SLC39A5_5end
|association_with_transcript=0bp_to_NM_173596,uc010sqi.1,uc010...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283375 | |EntrezGene=283375 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20502 | |HGNC=20502 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZMH5 | |UniProt=Q6ZMH5 | ||
|association_with_transcript=0bp_to_NM_173596,uc010sqi.1,uc010sqj.1_5end | |||
|cluster_id=chr12:56623816..56623825,+ | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_4_at_SLC39A5_5end | |||
|id=chr12:56623816..56623825,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.24e-14!12;CL:0000417!4.24e-14!12;CL:0000668!4.24e-14!12;CL:0000414!4.24e-14!12;CL:0000412!4.24e-14!12;CL:0000182!4.24e-14!12;CL:0002127!6.68e-08!1;CL:0000914!6.68e-08!1;CL:0000911!6.68e-08!1;CL:0000814!6.68e-08!1;CL:0002042!6.68e-08!1;CL:0002039!6.68e-08!1;CL:0002040!6.68e-08!1;CL:0002041!6.68e-08!1;CL:0002563!8.83e-08!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;8.73e-07;31 | |||
|ontology_enrichment_disease=DOID:630!5.07e-08!1;DOID:0050177!5.07e-08!1;DOID:0050427!5.07e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.65e-19!27;UBERON:0002107!5.16e-17!19;UBERON:0006925!5.16e-17!19;UBERON:0008836!5.16e-17!19;UBERON:0009497!1.84e-16!25;UBERON:0000015!1.84e-16!25;UBERON:0002423!1.84e-16!25;UBERON:0006235!1.84e-16!25;UBERON:0004161!1.84e-16!25;UBERON:0003929!5.60e-16!54;UBERON:0005057!8.88e-16!26;UBERON:0008835!1.38e-14!22;UBERON:0003894!1.38e-14!22;UBERON:0005409!1.92e-14!35;UBERON:0009854!6.46e-14!23;UBERON:0004921!9.01e-14!129;UBERON:0004185!9.01e-14!129;UBERON:0001155!8.12e-13!9;UBERON:0007499!9.73e-13!25;UBERON:0001007!2.58e-12!155;UBERON:0001555!2.58e-12!155;UBERON:0007026!2.58e-12!155;UBERON:0009856!3.23e-12!26;UBERON:0002368!1.94e-11!35;UBERON:0004119!5.37e-11!169;UBERON:0000925!5.37e-11!169;UBERON:0006595!5.37e-11!169;UBERON:0000949!5.52e-11!45;UBERON:0005172!8.30e-11!55;UBERON:0005173!8.30e-11!55;UBERON:0000059!1.64e-10!11;UBERON:0002365!4.09e-10!31;UBERON:0002330!4.09e-10!31;UBERON:0005911!8.78e-10!82;UBERON:0002417!1.40e-09!61;UBERON:0000916!1.40e-09!61;UBERON:0002530!5.07e-08!59;UBERON:0001242!8.83e-08!4;UBERON:0001262!8.83e-08!4;UBERON:0004786!8.83e-08!4;UBERON:0004808!8.83e-08!4;UBERON:0001277!8.83e-08!4;UBERON:0002108!9.44e-08!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.97e-17;17!UBERON:0005409;1.21e-13;22!UBERON:0001155;3.98e-13;9!UBERON:0002108;4.01e-11;4!UBERON:0000059;7.59e-11;11!UBERON:0004921;4.75e-09;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.84e-17,17;UBERON:0001155,4.06e-13,9;UBERON:0005409,4.39e-12,25;UBERON:0002108,3.54e-11,4;UBERON:0000059,7.72e-11,11 | |||
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|short_description=p4@SLC39A5 | |||
}} | }} |
Latest revision as of 10:28, 19 September 2015
Short description: | p4@SLC39A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC39A5_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | 0bp_to_NM_173596, uc010sqi.1, uc010sqj.1_5end |
EntrezGene: | SLC39A5 |
HGNC: | 20502 |
UniProt: | Q6ZMH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.84e-17 | 17 |
colon | 4.06e-13 | 9 |
gastrointestinal system | 4.39e-12 | 25 |
small intestine | 3.54e-11 | 4 |
large intestine | 7.72e-11 | 11 |