FFCP PHASE1:Hg19::chr14:23540834..23540843,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:23540834..23540843,-
|short_description=p5@ACIN1
|description=CAGE_peak_5_at_ACIN1_5end
|association_with_transcript=-8bp_to_ENST00000357481_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22985 | |EntrezGene=22985 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17066 | |HGNC=17066 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000357481_5end | |||
|cluster_id=chr14:23540834..23540843,- | |||
|description=CAGE_peak_5_at_ACIN1_5end | |||
|id=chr14:23540834..23540843,- | |||
|ontology_enrichment_celltype=CL:0000055!5.23e-15!180;CL:0000548!1.80e-12!679;CL:0000004!1.80e-12!679;CL:0000255!1.80e-12!679;CL:0002321!2.97e-12!248;CL:0000012!5.95e-12!682;CL:0000220!1.38e-11!246;CL:0000183!3.56e-08!59;CL:0000144!1.95e-07!625;CL:0000680!2.46e-07!57;CL:0000056!2.46e-07!57;CL:0000355!2.46e-07!57;CL:0000393!3.73e-07!60;CL:0000211!3.73e-07!60;CL:0000066!7.87e-07!254;CL:0000222!8.41e-07!119;CL:0000187!8.93e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000039;6.39e-13;7!CL:0000586;6.39e-13;7!CL:0002564;1.97e-08;3!CL:0000708;1.59e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.55e-13,7;CL:0000586,3.55e-13,7;CL:0002564,3.30e-08,3;CL:0000708,9.24e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.82e-08!239;DOID:0050687!5.56e-08!143;DOID:162!2.75e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.41e-11;22!DOID:2994;1.41e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.07e-11,22;DOID:2994,1.07e-11,22 | |||
|ontology_enrichment_uberon=UBERON:0005256!2.72e-09!143;UBERON:0000914!5.50e-08!83;UBERON:0002329!5.50e-08!83;UBERON:0003077!5.50e-08!83;UBERON:0003059!5.50e-08!83;UBERON:0007282!5.50e-08!83;UBERON:0009618!5.50e-08!83;UBERON:0007285!5.50e-08!83;UBERON:0000486!1.24e-07!82;UBERON:0003104!1.42e-07!238;UBERON:0009142!1.42e-07!238;UBERON:0002100!2.98e-07!216;UBERON:0004290!5.42e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.02e-12;5!UBERON:0002216;1.02e-12;5!UBERON:0011134;1.02e-12;5!UBERON:0002209;1.02e-12;5!UBERON:0002213;1.02e-12;5!UBERON:0007844;1.02e-12;5!UBERON:0011138;1.02e-12;5!UBERON:0001130;1.02e-12;5!UBERON:0001066;1.02e-12;5!UBERON:0001468;1.02e-12;5!UBERON:0004905;8.75e-11;8!UBERON:0000982;8.75e-11;8!UBERON:0004770;8.75e-11;8!UBERON:0002242;1.97e-08;3!UBERON:0003210;1.59e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,7.83e-13,5;UBERON:0002216,7.83e-13,5;UBERON:0011134,7.83e-13,5;UBERON:0002209,7.83e-13,5;UBERON:0002213,7.83e-13,5;UBERON:0005856,7.83e-13,5;UBERON:0005866,7.83e-13,5;UBERON:0005863,7.83e-13,5;UBERON:0007844,7.83e-13,5;UBERON:0011138,7.83e-13,5;UBERON:0001130,7.83e-13,5;UBERON:0001066,7.83e-13,5;UBERON:0001468,7.83e-13,5;UBERON:0004905,1.03e-10,8;UBERON:0000982,1.03e-10,8;UBERON:0004770,1.03e-10,8;UBERON:0002242,3.30e-08,3;UBERON:0003068,3.30e-08,3;UBERON:0002328,3.30e-08,3;UBERON:0004880,3.30e-08,3;UBERON:0003210,9.24e-08,3 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,0,0,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0.218441372130172,0,2.47532705920093,1.98838425436749,0,0,1.46062018077475,0.975865597581014,0.984968464614303,0.612002073732759,1.25381888591235,0,0.958120975510189,0.125542639594803,0,0,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.255725123687061,0,0.50133791063589,0.724232594804119,0,0,1.32348744029695,0,1.14185221401064,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0,0,0.267899184852239,0.22452937262617,0,0,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0,0.379891534993739,1.72131935057184,0.286836620748814,0.354668382198357,1.12135520028461,0,0,0.311211035399766,0,0,2.11900398702904,0.576175924479999,0.70296429550139,1.5608003841516,0,0,0.352303495931295,0,0.702254033511242,1.22492502752936,0.61417158655884,0.723280468230358,0,0,0,0.718618141816238,1.0100166837244,0.500474079487857,0.277064115484183,0.877955241761676,0,0.300476117813194,0.340296549480063,0.538168907066586,0.427114777637135,0.211931901159562,0.600182192168805,0.309157587715317,0.257640540045629,0,1.0126579934476,0.194874010322397,1.26216887122057,0.276149695926898,0.161646056818812,0,0.403008392910561,0.169560592310488,0.386521706326594,0,0.573609190778008,0.853815942907168,1.98794652482228,1.04574548582567,0.621966330092223,1.7662459561294,1.82488679537915,1.56449532329816,0.643240938192885,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0.241011029883482,0.441175890929576,0.217879444092406,0,0.269662616320329,0,0.38474715694639,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.122988438543114,1.20097467208968,0.109750285408626,0,0.100528972411631,0,0.651616610620649,0,0,0.34779121492523,0.469634776943287,0,0,0.190254152234598,1.58040879591855,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,3.4214489204541,0.102827492703324,0.300343057843917,0,1.12131084345361,1.74384027533312,1.54010400223995,1.03417372606222,0,0,0.797814349754612,0,0.514414748524284,0,1.3321108950805,0,0.542621605391443,0.823240336780769,0,0,0,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,0.479249710983165,0,0,0.144781306667579,0.410952645100767,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,4.53958519360818,2.50085260529839,1.08506009479894,0,0.535286966391485,0.630809660135739,0.35142424497814,0.902838299183157,0,0,1.32845119707087,0.184369168541703,0.695068915744663,1.17480694477644,1.71571711905428,0,0,0,0,1.66435439510497,0,0,0.460385919864187,0,0,0,0.321707842287215,0,0.154209693802656,0,0.574890092096664,0,0.348631135379878,0.241718899183244,0,0.0920809889358963,0.574072240823034,0.728364672026868,1.04899531967539,0,0.15403067420883,0,0,0.527758144464379,1.13733384070897,0.170093705276516,0,0,0.270946437543853,1.00337954770971,0.509752546090077,0,0.895499018888713,0,0,1.02580050046556,0.984043937099117,0,0,1.00726411300178,1.40266149865,1.14853107599234,0,1.6068392984416,0.96670718292122,0.924291702687866,1.38153307253517,0.551346289938122,1.6113036730241,1.45016693914229,0.767039646744908,1.4245125703478,0.330569830721956,0.384380134730212,0.382838137483752,0.10115778085555,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0.744316738719335,0.949138274156178,0.571890581771475,0.255897791311334,0.855877976067841,0,0,0.899362287916574,0,1.29593642580255,0.404364963146632,0,0.842516912477962,0.975267478179181,0.243713489631284,0,0.545999645631943,0.424216295861138,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,2.31510213706675,1.31178950409327,0.202910376962704,0.30982349809975,0.281695602532241,0.286822704408103,0,0,0.354761064070598,0.211107635297664,0.329294892959902,1.51789269506286,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0.144269212976445,0.0711418433484141,0.478278818186467,0,0,0.211673582723883,0.973865820823666,0,0,0,0,0.169291777801603,0,0,0,0,0.614481528616916,0,0.166849141711909,0,0.278406173895242,0,0.270455678475983,0,1.4098700508785,0,0,0.121360521749513,0.111443384277478,0.852408440419239,0,0,0,0,0,0.111308705022906,0,0.844501632511974,0,0,0.503865495708552,0,0,0,0.269605053441981,0.537063524026827,0,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0.341380344856499,0.254253650292766,0,0.344743373241465,0.874813840149763,0,0,0,0,0,0,0,0.435753854075961,0.139423744278603,0.230850775511391,0.227884111694002,2.3056390438806,4.12885164284952,8.80043712568265,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0.167821586975843,0.37950746544837,0,0,1.30586246527318,0.42405921430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| ||
|short_description=p5@ACIN1 | |||
}} | }} |
Latest revision as of 08:47, 19 September 2015
Short description: | p5@ACIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ACIN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000357481_5end |
EntrezGene: | ACIN1 |
HGNC: | 17066 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.55e-13 | 7 |
germ cell | 3.55e-13 | 7 |
nucleus pulposus cell of intervertebral disc | 3.30e-08 | 3 |
leptomeningeal cell | 9.24e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 7.83e-13 | 5 |
symphysis | 7.83e-13 | 5 |
nonsynovial joint | 7.83e-13 | 5 |
fibrous joint | 7.83e-13 | 5 |
cartilaginous joint | 7.83e-13 | 5 |
developing mesenchymal condensation | 7.83e-13 | 5 |
pre-cartilage condensation | 7.83e-13 | 5 |
cartilaginous condensation | 7.83e-13 | 5 |
cartilage element | 7.83e-13 | 5 |
post-cranial axial skeletal system | 7.83e-13 | 5 |
vertebral column | 7.83e-13 | 5 |
intervertebral disk | 7.83e-13 | 5 |
intervertebral joint | 7.83e-13 | 5 |
articulation | 1.03e-10 | 8 |
skeletal joint | 1.03e-10 | 8 |
articular system | 1.03e-10 | 8 |
nucleus pulposus | 3.30e-08 | 3 |
axial mesoderm | 3.30e-08 | 3 |
notochord | 3.30e-08 | 3 |
chordamesoderm | 3.30e-08 | 3 |
blood-cerebrospinal fluid barrier | 9.24e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.07e-11 | 22 |
germ cell cancer | 1.07e-11 | 22 |