FFCP PHASE1:Hg19::chr1:78769549..78769554,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5737 | |EntrezGene=5737 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9600 | |HGNC=9600 | ||
|TSSclassifier=strong | |||
|UniProt=P43088 | |UniProt=P43088 | ||
|association_with_transcript=-13bp_to_ENST00000370758_5end | |association_with_transcript=-13bp_to_ENST00000370758_5end | ||
|cluster_id=chr1:78769549..78769554,+ | |||
|description=CAGE_peak_5_at_PTGFR_5end | |description=CAGE_peak_5_at_PTGFR_5end | ||
|id=chr1:78769549..78769554,+ | |id=chr1:78769549..78769554,+ | ||
|ontology_enrichment_celltype=CL:0000594!4.50e-10!3;CL:0002602!5.68e-08!2;CL:0000569!5.28e-07!4;CL:0000011!5.28e-07!4 | |ontology_enrichment_celltype=CL:0000594!4.50e-10!3;CL:0002602!5.68e-08!2;CL:0000569!5.28e-07!4;CL:0000011!5.28e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002602;1.55e-98;2!CL:0002540;1.38e-09;6!CL:0000062;8.14e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,5.68e-99,2;CL:0002540,1.44e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009568!5.68e-08!2;UBERON:0002216!5.68e-08!2;UBERON:0002209!5.68e-08!2;UBERON:0002213!5.68e-08!2;UBERON:0004267!5.68e-08!2;UBERON:0006444!5.68e-08!2;UBERON:0001995!5.68e-08!2;UBERON:0004715!5.68e-08!2;UBERON:0001468!5.68e-08!2;UBERON:0001130!5.68e-08!2;UBERON:0001066!5.68e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006444;1.55e-98;2!UBERON:0001995;1.55e-98;2!UBERON:0004715;1.55e-98;2!UBERON:0002418;3.35e-66;3!UBERON:0004755;3.35e-66;3!UBERON:0011135;2.71e-40;5!UBERON:0002216;2.71e-40;5!UBERON:0011134;2.71e-40;5!UBERON:0002209;2.71e-40;5!UBERON:0002213;2.71e-40;5!UBERON:0007844;2.71e-40;5!UBERON:0011138;2.71e-40;5!UBERON:0001130;2.71e-40;5!UBERON:0001066;2.71e-40;5!UBERON:0001468;2.71e-40;5!UBERON:0004905;1.11e-25;8!UBERON:0000982;1.11e-25;8!UBERON:0004770;1.11e-25;8!UBERON:0004765;5.34e-18;26!UBERON:0000075;1.95e-13;16!UBERON:0001434;6.89e-11;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,5.68e-99,2;UBERON:0001995,5.68e-99,2;UBERON:0004715,5.68e-99,2;UBERON:0002418,1.71e-66,3;UBERON:0004755,1.71e-66,3;UBERON:0011135,1.81e-40,5;UBERON:0002216,1.81e-40,5;UBERON:0011134,1.81e-40,5;UBERON:0002209,1.81e-40,5;UBERON:0002213,1.81e-40,5;UBERON:0005856,1.81e-40,5;UBERON:0005866,1.81e-40,5;UBERON:0005863,1.81e-40,5;UBERON:0007844,1.81e-40,5;UBERON:0011138,1.81e-40,5;UBERON:0001130,1.81e-40,5;UBERON:0001066,1.81e-40,5;UBERON:0001468,1.81e-40,5;UBERON:0004905,8.65e-26,8;UBERON:0000982,8.65e-26,8;UBERON:0004770,8.65e-26,8;UBERON:0000075,1.72e-13,16 | |||
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| ||
|short_description=p5@PTGFR | |short_description=p5@PTGFR | ||
}} | }} |
Latest revision as of 08:32, 19 September 2015
Short description: | p5@PTGFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PTGFR_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000370758_5end |
EntrezGene: | PTGFR |
HGNC: | 9600 |
UniProt: | P43088 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 5.68e-99 | 2 |
mesenchymal stem cell of the bone marrow | 1.44e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
annulus fibrosus | 5.68e-99 | 2 |
fibrocartilage | 5.68e-99 | 2 |
annulus fibrosus disci intervertebralis | 5.68e-99 | 2 |
cartilage tissue | 1.71e-66 | 3 |
skeletal tissue | 1.71e-66 | 3 |
intervertebral cartilage | 1.81e-40 | 5 |
symphysis | 1.81e-40 | 5 |
nonsynovial joint | 1.81e-40 | 5 |
fibrous joint | 1.81e-40 | 5 |
cartilaginous joint | 1.81e-40 | 5 |
developing mesenchymal condensation | 1.81e-40 | 5 |
pre-cartilage condensation | 1.81e-40 | 5 |
cartilaginous condensation | 1.81e-40 | 5 |
cartilage element | 1.81e-40 | 5 |
post-cranial axial skeletal system | 1.81e-40 | 5 |
vertebral column | 1.81e-40 | 5 |
intervertebral disk | 1.81e-40 | 5 |
intervertebral joint | 1.81e-40 | 5 |
articulation | 8.65e-26 | 8 |
skeletal joint | 8.65e-26 | 8 |
articular system | 8.65e-26 | 8 |
subdivision of skeletal system | 1.72e-13 | 16 |