FFCP PHASE1:Hg19::chr19:50083803..50083821,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:50083803..50083821,- to FFCP PHASE1:Hg19::chr19:50083803..50083821,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51070 | |EntrezGene=51070 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17946 | |HGNC=17946 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y314 | |UniProt=Q9Y314 | ||
|association_with_transcript=0bp_to_ENST00000339093,ENST00000391853,NM_015953,uc002pok.2,uc002pol.2,uc010yay.1_5end | |||
|cluster_id=chr19:50083803..50083821,- | |||
|description=CAGE_peak_1_at_NOSIP_5end | |||
|id=chr19:50083803..50083821,- | |||
|ontology_enrichment_celltype=CL:0000222!8.21e-17!119;CL:0000066!2.90e-14!254;CL:0002321!1.68e-13!248;CL:0000220!3.47e-13!246;CL:0002078!1.11e-11!44;CL:0000115!2.89e-11!35;CL:0000213!3.85e-11!57;CL:0000215!3.85e-11!57;CL:0002139!4.35e-10!24;CL:0000003!4.51e-10!722;CL:0000071!3.15e-09!18;CL:0002546!3.15e-09!18;CL:0000548!3.35e-09!679;CL:0000004!3.35e-09!679;CL:0000255!3.35e-09!679;CL:1000449!8.12e-09!16;CL:0000012!9.26e-09!682;CL:0002681!4.94e-08!13;CL:0002584!4.94e-08!13;CL:1000497!7.11e-08!18;CL:0002518!7.11e-08!18;CL:0000183!1.06e-07!59;CL:0000076!1.38e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.79e-10;24!CL:0000115;5.00e-10;36!CL:0000071;2.91e-09;18!CL:0002078;8.55e-09;45!CL:1000449;1.21e-08;15!CL:0002681;6.84e-08;12!CL:0002584;6.84e-08;12!CL:1000497;1.19e-07;17!CL:0002518;1.19e-07;17!CL:0000213;1.45e-07;58!CL:0000215;1.45e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.88e-17,121;CL:0000066,4.62e-14,253;CL:0002321,5.11e-14,250;CL:0002078,4.00e-12,45;CL:0000115,1.00e-11,36;CL:0000213,1.48e-11,58;CL:0000215,1.48e-11,58;CL:0002139,4.35e-10,24;CL:0000071,3.15e-09,18;CL:0002546,3.15e-09,18;CL:1000449,1.17e-08,15;CL:0002681,6.84e-08,12;CL:0002584,6.84e-08,12;CL:0000076,8.88e-08,63;CL:1000497,1.10e-07,17;CL:0002518,1.10e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;2.91e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.34e-12!79;UBERON:0007798!3.34e-12!79;UBERON:0003914!7.86e-12!118;UBERON:0000055!1.24e-11!69;UBERON:0001009!3.94e-10!113;UBERON:0001981!4.20e-10!60;UBERON:0007500!4.20e-10!60;UBERON:0004537!4.20e-10!60;UBERON:0006965!4.20e-10!60;UBERON:0004872!7.07e-10!84;UBERON:0004535!9.09e-10!110;UBERON:0000490!1.69e-09!138;UBERON:0001986!3.15e-09!18;UBERON:0004638!3.15e-09!18;UBERON:0004852!3.15e-09!18;UBERON:0004211!8.12e-09!16;UBERON:0001285!8.12e-09!16;UBERON:0007684!8.12e-09!16;UBERON:0003220!8.12e-09!16;UBERON:0004208!8.12e-09!16;UBERON:0001637!9.73e-09!42;UBERON:0003509!9.73e-09!42;UBERON:0004572!9.73e-09!42;UBERON:0000487!3.04e-08!22;UBERON:0006914!4.03e-08!25;UBERON:0001225!4.94e-08!13;UBERON:0008987!4.94e-08!13;UBERON:0000353!5.02e-08!17;UBERON:0006555!1.65e-07!17;UBERON:0005103!1.65e-07!17;UBERON:0000083!1.65e-07!17;UBERON:0009201!1.65e-07!17;UBERON:0004819!1.65e-07!17;UBERON:0006553!1.65e-07!17;UBERON:0003074!1.65e-07!17;UBERON:0003060!1.65e-07!17;UBERON:0003104!4.94e-07!238;UBERON:0009142!4.94e-07!238;UBERON:0004290!8.25e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.91e-09;18!UBERON:0001986;2.91e-09;18!UBERON:0004852;2.91e-09;18!UBERON:0000353;4.68e-09;15!UBERON:0003914;1.03e-08;74!UBERON:0006555;1.21e-08;15!UBERON:0004819;1.21e-08;15!UBERON:0001285;1.21e-08;15!UBERON:0007684;1.21e-08;15!UBERON:0000490;2.31e-08;33!UBERON:0000487;2.56e-08;22!UBERON:0006914;3.30e-08;25!UBERON:0001225;6.84e-08;12!UBERON:0008987;6.84e-08;12!UBERON:0007500;5.35e-07;56!UBERON:0001981;5.35e-07;56!UBERON:0004537;5.35e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,8.91e-13,78;UBERON:0007798,8.91e-13,78;UBERON:0000055,3.10e-12,68;UBERON:0003914,1.26e-11,117;UBERON:0007500,1.07e-10,59;UBERON:0001981,1.07e-10,59;UBERON:0004537,1.07e-10,59;UBERON:0006965,1.07e-10,59;UBERON:0001009,1.53e-10,112;UBERON:0004872,2.35e-10,83;UBERON:0000490,3.45e-10,148;UBERON:0004535,3.56e-10,109;UBERON:0007503,9.63e-10,78;UBERON:0004638,3.15e-09,18;UBERON:0001986,3.15e-09,18;UBERON:0004852,3.15e-09,18;UBERON:0000353,4.75e-09,15;UBERON:0001637,9.73e-09,42;UBERON:0003509,9.73e-09,42;UBERON:0004572,9.73e-09,42;UBERON:0004211,1.17e-08,15;UBERON:0009773,1.17e-08,15;UBERON:0001231,1.17e-08,15;UBERON:0001285,1.17e-08,15;UBERON:0007684,1.17e-08,15;UBERON:0004208,1.17e-08,15;UBERON:0000487,3.04e-08,22;UBERON:0006914,4.03e-08,25;UBERON:0001225,6.84e-08,12;UBERON:0008987,6.84e-08,12;UBERON:0006555,2.56e-07,16;UBERON:0004819,2.56e-07,16;UBERON:0002329,5.36e-07,71;UBERON:0003059,5.36e-07,71;UBERON:0007282,5.36e-07,71;UBERON:0004290,5.36e-07,71;UBERON:0009618,5.36e-07,71;UBERON:0002100,7.81e-07,199;UBERON:0007524,8.43e-07,73;UBERON:0000486,9.22e-07,83 | |||
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| ||
|short_description=p1@NOSIP | |||
}} | }} |
Latest revision as of 08:12, 19 September 2015
Short description: | p1@NOSIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NOSIP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000339093, ENST00000391853, NM_015953, uc002pok.2, uc002pol.2, uc010yay.1_5end |
EntrezGene: | NOSIP |
HGNC: | 17946 |
UniProt: | Q9Y314 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.88e-17 | 121 |
epithelial cell | 4.62e-14 | 253 |
embryonic cell | 5.11e-14 | 250 |
meso-epithelial cell | 4.00e-12 | 45 |
endothelial cell | 1.00e-11 | 36 |
lining cell | 1.48e-11 | 58 |
barrier cell | 1.48e-11 | 58 |
endothelial cell of vascular tree | 4.35e-10 | 24 |
blood vessel endothelial cell | 3.15e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.15e-09 | 18 |
epithelial cell of nephron | 1.17e-08 | 15 |
kidney cortical cell | 6.84e-08 | 12 |
renal cortical epithelial cell | 6.84e-08 | 12 |
squamous epithelial cell | 8.88e-08 | 63 |
kidney cell | 1.10e-07 | 17 |
kidney epithelial cell | 1.10e-07 | 17 |