FFCP PHASE1:Hg19::chr3:62358596..62358618,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55079 | |EntrezGene=55079 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13506 | |HGNC=13506 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TBJ5 | |UniProt=Q8TBJ5 | ||
|association_with_transcript=71bp_to_ENST00000475839_5end | |association_with_transcript=71bp_to_ENST00000475839_5end | ||
|cluster_id=chr3:62358596..62358618,- | |||
|coexpression_cluster_id=C369 | |||
|description=CAGE_peak_3_at_FEZF2_5end | |description=CAGE_peak_3_at_FEZF2_5end | ||
|id=chr3:62358596..62358618,- | |id=chr3:62358596..62358618,- | ||
|ontology_enrichment_celltype=CL:0002322!4.05e-21!5;CL:0002605!2.42e-14!3;CL:0000047!5.64e-14!8;CL:0000133!4.11e-11!59;CL:0002549!1.79e-09!2;CL:0002319!1.96e-09!25;CL:0000221!8.90e-09!71;CL:0000540!1.87e-07!6;CL:0000031!1.87e-07!6;CL:0000404!1.87e-07!6;CL:0000710!2.64e-07!20;CL:0000148!3.64e-07!10;CL:0000541!3.64e-07!10;CL:0000075!4.38e-07!27;CL:0000064!8.69e-07!3;CL:0005012!8.69e-07!3;CL:0000067!8.69e-07!3;CL:0002304!8.69e-07!3 | |ontology_enrichment_celltype=CL:0002322!4.05e-21!5;CL:0002605!2.42e-14!3;CL:0000047!5.64e-14!8;CL:0000133!4.11e-11!59;CL:0002549!1.79e-09!2;CL:0002319!1.96e-09!25;CL:0000221!8.90e-09!71;CL:0000540!1.87e-07!6;CL:0000031!1.87e-07!6;CL:0000404!1.87e-07!6;CL:0000710!2.64e-07!20;CL:0000148!3.64e-07!10;CL:0000541!3.64e-07!10;CL:0000075!4.38e-07!27;CL:0000064!8.69e-07!3;CL:0005012!8.69e-07!3;CL:0000067!8.69e-07!3;CL:0002304!8.69e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002605;7.73e-36;3!CL:0002319;8.44e-21;25!CL:0000540;1.63e-18;6!CL:0000404;1.63e-18;6!CL:0000128;9.19e-16;7!CL:0000126;9.19e-16;7!CL:0000127;9.19e-16;7!CL:0000075;3.03e-07;27!CL:0000047;4.42e-07;2!CL:0000243;8.34e-07;15!CL:0000125;8.34e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,7.74e-36,3;CL:0000047,7.47e-24,8;CL:0002319,8.97e-21,25;CL:0000540,1.63e-18,6;CL:0000031,1.63e-18,6;CL:0000404,1.63e-18,6;CL:0000133,5.47e-18,59;CL:0000128,9.19e-16,7;CL:0000126,9.19e-16,7;CL:0000127,9.19e-16,7;CL:0002453,9.19e-16,7;CL:0000221,1.30e-14,72;CL:0000075,3.14e-07,27;CL:0000243,8.34e-07,15;CL:0000125,8.34e-07,15;CL:0000030,8.34e-07,15;CL:0000339,8.34e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000031;1.63e-18;6!CL:0000133;1.21e-10;59!CL:0000339;8.34e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!2.43e-41!32;UBERON:0002780!9.35e-39!41;UBERON:0001890!9.35e-39!41;UBERON:0006240!9.35e-39!41;UBERON:0001893!1.03e-38!34;UBERON:0003080!9.80e-38!42;UBERON:0000956!1.19e-37!25;UBERON:0000203!1.19e-37!25;UBERON:0002791!9.96e-36!33;UBERON:0001017!1.45e-35!82;UBERON:0002020!1.39e-34!34;UBERON:0003528!1.39e-34!34;UBERON:0005743!1.24e-33!86;UBERON:0003056!2.58e-33!61;UBERON:0002616!2.88e-31!59;UBERON:0000073!7.20e-30!94;UBERON:0001016!7.20e-30!94;UBERON:0002619!1.70e-27!22;UBERON:0001049!1.18e-26!57;UBERON:0005068!1.18e-26!57;UBERON:0006241!1.18e-26!57;UBERON:0007135!1.18e-26!57;UBERON:0000955!1.47e-25!69;UBERON:0006238!1.47e-25!69;UBERON:0003075!3.17e-24!86;UBERON:0007284!3.17e-24!86;UBERON:0002346!6.77e-23!90;UBERON:0001950!1.43e-21!20;UBERON:0000153!2.58e-20!129;UBERON:0007811!2.58e-20!129;UBERON:0000033!4.14e-18!123;UBERON:0004121!6.10e-18!169;UBERON:0000924!2.30e-17!173;UBERON:0006601!2.30e-17!173;UBERON:0000349!1.90e-13!5;UBERON:0003947!1.79e-09!2;UBERON:0005629!1.79e-09!2;UBERON:0005358!1.79e-09!2;UBERON:0001886!1.79e-09!2;UBERON:0004086!1.79e-09!2;UBERON:0005282!1.79e-09!2;UBERON:0005281!1.79e-09!2;UBERON:0001954!2.63e-09!2;UBERON:0003022!2.63e-09!2;UBERON:0002421!2.63e-09!2;UBERON:0002600!2.63e-09!2;UBERON:0007023!1.80e-08!115;UBERON:0002021!4.10e-08!5;UBERON:0001872!4.88e-08!5;UBERON:0001778!8.69e-07!3;UBERON:0001775!8.69e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.63e-24;2!UBERON:0005058;2.63e-24;2!UBERON:0009113;2.63e-24;2!UBERON:0000956;8.49e-16;25!UBERON:0000203;8.49e-16;25!UBERON:0002791;3.91e-12;32!UBERON:0001869;4.67e-12;32!UBERON:0003528;2.43e-11;34!UBERON:0002020;2.43e-11;34!UBERON:0001893;1.80e-10;34!UBERON:0004177;2.58e-10;5!UBERON:0005057;2.58e-10;5!UBERON:0000922;3.97e-08;49!UBERON:0002780;4.06e-08;41!UBERON:0001890;4.06e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,8.95e-16,25;UBERON:0000203,8.95e-16,25;UBERON:0001017,7.95e-13,81;UBERON:0002370,9.76e-13,4;UBERON:0005058,9.76e-13,4;UBERON:0009113,9.76e-13,4;UBERON:0003295,9.76e-13,4;UBERON:0005562,9.76e-13,4;UBERON:0002791,2.31e-12,32;UBERON:0001869,2.31e-12,32;UBERON:0003528,1.23e-11,34;UBERON:0002020,1.23e-11,34;UBERON:0001893,1.23e-11,34;UBERON:0001016,1.90e-11,89;UBERON:0003056,2.78e-11,61;UBERON:0002780,1.22e-09,41;UBERON:0001890,1.22e-09,41;UBERON:0003080,1.22e-09,41;UBERON:0006240,1.22e-09,41;UBERON:0003351,8.57e-09,6;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0004121,4.10e-08,171;UBERON:0000924,4.10e-08,171;UBERON:0006601,4.10e-08,171;UBERON:0002346,8.68e-08,86;UBERON:0004177,1.17e-07,7;UBERON:0005057,1.17e-07,7;UBERON:0000073,2.06e-07,53;UBERON:0002616,2.06e-07,53;UBERON:0001049,5.31e-07,56;UBERON:0005068,5.31e-07,56;UBERON:0006241,5.31e-07,56;UBERON:0007135,5.31e-07,56;UBERON:0011216,6.08e-07,223 | |||
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| ||
|short_description=p3@FEZF2 | |short_description=p3@FEZF2 | ||
}} | }} |
Latest revision as of 08:06, 19 September 2015
Short description: | p3@FEZF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FEZF2_5end |
Coexpression cluster: | C369_Lens_eye_Ciliary_retina_H9_Retinal_Renal |
Association with transcript: | 71bp_to_ENST00000475839_5end |
EntrezGene: | FEZF2 |
HGNC: | 13506 |
UniProt: | Q8TBJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 7.74e-36 | 3 |
neuronal stem cell | 7.47e-24 | 8 |
neural cell | 8.97e-21 | 25 |
neuron | 1.63e-18 | 6 |
neuroblast | 1.63e-18 | 6 |
electrically signaling cell | 1.63e-18 | 6 |
neurectodermal cell | 5.47e-18 | 59 |
oligodendrocyte | 9.19e-16 | 7 |
macroglial cell | 9.19e-16 | 7 |
astrocyte | 9.19e-16 | 7 |
oligodendrocyte precursor cell | 9.19e-16 | 7 |
ectodermal cell | 1.30e-14 | 72 |
columnar/cuboidal epithelial cell | 3.14e-07 | 27 |
glial cell (sensu Vertebrata) | 8.34e-07 | 15 |
glial cell | 8.34e-07 | 15 |
glioblast | 8.34e-07 | 15 |
glioblast (sensu Vertebrata) | 8.34e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 8.95e-16 | 25 |
pallium | 8.95e-16 | 25 |
central nervous system | 7.95e-13 | 81 |
thymus | 9.76e-13 | 4 |
hemolymphoid system gland | 9.76e-13 | 4 |
thymic region | 9.76e-13 | 4 |
pharyngeal gland | 9.76e-13 | 4 |
thymus primordium | 9.76e-13 | 4 |
regional part of telencephalon | 2.31e-12 | 32 |
cerebral hemisphere | 2.31e-12 | 32 |
brain grey matter | 1.23e-11 | 34 |
gray matter | 1.23e-11 | 34 |
telencephalon | 1.23e-11 | 34 |
nervous system | 1.90e-11 | 89 |
pre-chordal neural plate | 2.78e-11 | 61 |
regional part of forebrain | 1.22e-09 | 41 |
forebrain | 1.22e-09 | 41 |
anterior neural tube | 1.22e-09 | 41 |
future forebrain | 1.22e-09 | 41 |
pharyngeal epithelium | 8.57e-09 | 6 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
ectoderm-derived structure | 4.10e-08 | 171 |
ectoderm | 4.10e-08 | 171 |
presumptive ectoderm | 4.10e-08 | 171 |
neurectoderm | 8.68e-08 | 86 |
hemopoietic organ | 1.17e-07 | 7 |
immune organ | 1.17e-07 | 7 |
regional part of nervous system | 2.06e-07 | 53 |
regional part of brain | 2.06e-07 | 53 |
neural tube | 5.31e-07 | 56 |
neural rod | 5.31e-07 | 56 |
future spinal cord | 5.31e-07 | 56 |
neural keel | 5.31e-07 | 56 |
organ system subdivision | 6.08e-07 | 223 |