FFCP PHASE1:Hg19::chr4:89514516..89514528,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8916 | |EntrezGene=8916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4876 | |HGNC=4876 | ||
|TSSclassifier=strong | |||
|UniProt=C9J8E7 | |UniProt=C9J8E7 | ||
|association_with_transcript=0bp_to_ENST00000452979_5end | |association_with_transcript=0bp_to_ENST00000452979_5end | ||
|cluster_id=chr4:89514516..89514528,+ | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_7_at_HERC3_5end | |description=CAGE_peak_7_at_HERC3_5end | ||
|id=chr4:89514516..89514528,+ | |id=chr4:89514516..89514528,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.31e-10!43;CL:0002327!2.13e-10!4;CL:0002621!4.37e-08!3;CL:0000223!1.41e-07!59 | |ontology_enrichment_celltype=CL:0002076!1.31e-10!43;CL:0002327!2.13e-10!4;CL:0002621!4.37e-08!3;CL:0000223!1.41e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002327;3.86e-32;4!CL:0002541;5.36e-20;3!CL:0002166;6.50e-20;3!CL:0002336;2.06e-15;1!CL:0002261;2.06e-15;1!CL:0002170;2.06e-15;1!CL:0002537;1.26e-12;5!CL:0000349;1.94e-12;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,2.80e-32,4;CL:0002541,4.02e-20,3;CL:0002166,6.50e-20,3;CL:0002336,2.38e-15,1;CL:0002261,2.38e-15,1;CL:0002170,2.38e-15,1;CL:0002537,1.26e-12,5;CL:0000349,1.77e-12,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001911!2.13e-10!4;UBERON:0005333!2.13e-10!4;UBERON:0008425!2.13e-10!4;UBERON:0005311!2.13e-10!4;UBERON:0001949!4.37e-08!3 | |ontology_enrichment_uberon=UBERON:0001911!2.13e-10!4;UBERON:0005333!2.13e-10!4;UBERON:0008425!2.13e-10!4;UBERON:0005311!2.13e-10!4;UBERON:0001949!4.37e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;3.86e-32;4!UBERON:0005631;2.51e-23;10!UBERON:0000158;2.51e-23;10!UBERON:0003124;5.36e-20;3!UBERON:0000920;5.36e-20;3!UBERON:0001708;3.41e-15;4!UBERON:0008895;3.41e-15;4!UBERON:0011159;2.38e-12;5!UBERON:0000478;6.66e-10;24!UBERON:0000305;2.80e-09;7!UBERON:0001905;2.31e-08;2!UBERON:0002757;2.31e-08;2!UBERON:0010134;2.31e-08;2!UBERON:0005408;2.31e-08;2!UBERON:0001899;2.31e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,2.80e-32,4;UBERON:0005333,2.80e-32,4;UBERON:0008425,2.80e-32,4;UBERON:0005311,2.80e-32,4;UBERON:0000920,4.02e-20,3;UBERON:0005631,8.01e-17,14;UBERON:0000158,8.01e-17,14;UBERON:0000076,1.65e-16,8;UBERON:0001708,3.42e-15,4;UBERON:0008895,3.42e-15,4;UBERON:0011159,2.38e-12,5;UBERON:0010188,1.90e-10,6;UBERON:0002539,1.90e-10,6;UBERON:0008816,1.90e-10,6;UBERON:0000478,6.21e-10,24;UBERON:0000305,2.80e-09,7;UBERON:0003124,3.58e-09,7;UBERON:0001905,2.87e-08,2;UBERON:0002757,2.87e-08,2;UBERON:0010134,2.87e-08,2;UBERON:0005408,2.87e-08,2;UBERON:0001899,2.87e-08,2;UBERON:0004871,3.15e-08,8 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.0787107813136792,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.573609190778008,0,0,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.98775256867763,0,0.703702806881416,1.29623823221941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51183915378974,2.69372684760534,1.70161193135412,1.16253575405585,1.53353071666084,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0.552485933615378,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,1.02090169995667,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0.886860307073351,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.07229042003222,0.890894042497916,3.37876772309155,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434589487688032,3.82801391678303,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0.139879507719444,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0,0,0.177404740325278,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0.285906176706625,0.158013611732727,0,0,0,0.414432328326074,0.3414369541879,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0.45178432815584,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@HERC3 | |short_description=p7@HERC3 | ||
}} | }} |
Latest revision as of 07:51, 19 September 2015
Short description: | p7@HERC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HERC3_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000452979_5end |
EntrezGene: | HERC3 |
HGNC: | 4876 |
UniProt: | C9J8E7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 2.80e-32 | 4 |
chorionic membrane mesenchymal stem cell | 4.02e-20 | 3 |
epithelial cell of Malassez | 6.50e-20 | 3 |
buccal mucosa cell | 2.38e-15 | 1 |
endothelial cell of viscerocranial mucosa | 2.38e-15 | 1 |
keratinized cell of the oral mucosa | 2.38e-15 | 1 |
amnion mesenchymal stem cell | 1.26e-12 | 5 |
extraembryonic cell | 1.77e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 2.80e-32 | 4 |
mammary bud | 2.80e-32 | 4 |
mammary ridge | 2.80e-32 | 4 |
mammary placode | 2.80e-32 | 4 |
egg chorion | 4.02e-20 | 3 |
extraembryonic membrane | 8.01e-17 | 14 |
membranous layer | 8.01e-17 | 14 |
external ectoderm | 1.65e-16 | 8 |
jaw skeleton | 3.42e-15 | 4 |
splanchnocranium | 3.42e-15 | 4 |
primary subdivision of cranial skeletal system | 2.38e-12 | 5 |
protuberance | 1.90e-10 | 6 |
pharyngeal arch | 1.90e-10 | 6 |
embryonic head | 1.90e-10 | 6 |
extraembryonic structure | 6.21e-10 | 24 |
amnion | 2.80e-09 | 7 |
chorion | 3.58e-09 | 7 |
pineal body | 2.87e-08 | 2 |
regional part of epithalamus | 2.87e-08 | 2 |
secretory circumventricular organ | 2.87e-08 | 2 |
circumventricular organ | 2.87e-08 | 2 |
epithalamus | 2.87e-08 | 2 |
somatic layer of lateral plate mesoderm | 3.15e-08 | 8 |