FFCP PHASE1:Hg19::chr17:27044878..27044894,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83871 | |EntrezGene=83871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16519 | |HGNC=16519 | ||
|TSSclassifier=strong | |||
|UniProt=A8MYQ9 | |UniProt=A8MYQ9 | ||
|association_with_transcript=-9bp_to_ENST00000395242_5end | |association_with_transcript=-9bp_to_ENST00000395242_5end | ||
|cluster_id=chr17:27044878..27044894,- | |||
|coexpression_cluster_id=C3622 | |||
|description=CAGE_peak_3_at_RAB34_5end | |description=CAGE_peak_3_at_RAB34_5end | ||
|id=chr17:27044878..27044894,- | |id=chr17:27044878..27044894,- | ||
|ontology_enrichment_celltype=CL:0000055!6.73e-31!180;CL:0000220!1.75e-20!246;CL:0002321!2.11e-20!248;CL:0000222!4.14e-16!119;CL:0000057!2.45e-15!75;CL:0000183!6.16e-14!59;CL:0000680!6.28e-13!57;CL:0000056!6.28e-13!57;CL:0000355!6.28e-13!57;CL:0000548!6.29e-13!679;CL:0000004!6.29e-13!679;CL:0000255!6.29e-13!679;CL:0000187!1.53e-12!54;CL:0000012!2.35e-12!682;CL:0000192!5.80e-12!42;CL:0000514!5.80e-12!42;CL:0000393!4.48e-11!60;CL:0000211!4.48e-11!60;CL:0000066!1.25e-10!254;CL:0000359!4.50e-10!32;CL:0000144!1.26e-09!625;CL:0002371!1.52e-07!591 | |ontology_enrichment_celltype=CL:0000055!6.73e-31!180;CL:0000220!1.75e-20!246;CL:0002321!2.11e-20!248;CL:0000222!4.14e-16!119;CL:0000057!2.45e-15!75;CL:0000183!6.16e-14!59;CL:0000680!6.28e-13!57;CL:0000056!6.28e-13!57;CL:0000355!6.28e-13!57;CL:0000548!6.29e-13!679;CL:0000004!6.29e-13!679;CL:0000255!6.29e-13!679;CL:0000187!1.53e-12!54;CL:0000012!2.35e-12!682;CL:0000192!5.80e-12!42;CL:0000514!5.80e-12!42;CL:0000393!4.48e-11!60;CL:0000211!4.48e-11!60;CL:0000066!1.25e-10!254;CL:0000359!4.50e-10!32;CL:0000144!1.26e-09!625;CL:0002371!1.52e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.19e-09;32!CL:0000192;6.15e-09;43!CL:0000134;5.27e-08;55!CL:0000187;2.73e-07;55!CL:0000048;4.99e-07;58!CL:0000349;6.13e-07;19!CL:0000723;6.18e-07;61!CL:0002320;7.68e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.01e-20,250;CL:0000222,1.12e-15,121;CL:0000057,1.72e-15,76;CL:0000680,3.97e-13,58;CL:0000056,3.97e-13,58;CL:0000355,3.97e-13,58;CL:0000187,9.84e-13,55;CL:0000192,3.97e-12,43;CL:0000514,3.97e-12,43;CL:0000393,2.90e-11,61;CL:0000211,2.90e-11,61;CL:0000066,1.00e-10,253;CL:0000359,3.53e-10,32;CL:0000349,5.39e-07,19;CL:0000221,6.37e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000514;6.15e-09;43!CL:0000355;3.76e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!6.31e-17!216;UBERON:0005256!2.99e-16!143;UBERON:0000486!4.02e-16!82;UBERON:0003104!4.46e-16!238;UBERON:0009142!4.46e-16!238;UBERON:0000914!7.91e-16!83;UBERON:0002329!7.91e-16!83;UBERON:0003077!7.91e-16!83;UBERON:0003059!7.91e-16!83;UBERON:0007282!7.91e-16!83;UBERON:0009618!7.91e-16!83;UBERON:0007285!7.91e-16!83;UBERON:0004290!4.03e-14!70;UBERON:0000481!3.36e-13!347;UBERON:0000475!6.52e-13!365;UBERON:0001134!2.29e-11!61;UBERON:0002036!2.29e-11!61;UBERON:0003082!2.29e-11!61;UBERON:0002385!4.83e-11!63;UBERON:0001015!4.83e-11!63;UBERON:0000383!4.83e-11!63;UBERON:0000468!2.03e-10!659;UBERON:0003102!5.25e-10!95;UBERON:0003914!1.71e-09!118;UBERON:0004872!8.58e-09!84;UBERON:0000119!1.73e-08!312;UBERON:0000483!2.00e-08!309;UBERON:0003103!3.33e-08!69;UBERON:0000922!3.63e-08!612;UBERON:0000926!4.51e-08!448;UBERON:0004120!4.51e-08!448;UBERON:0006603!4.51e-08!448;UBERON:0002050!4.75e-08!605;UBERON:0005423!4.75e-08!605;UBERON:0000923!5.61e-08!604;UBERON:0005291!5.61e-08!604;UBERON:0006598!5.61e-08!604;UBERON:0002532!5.61e-08!604;UBERON:0000467!8.48e-08!625;UBERON:0006554!9.44e-08!44;UBERON:0001008!1.43e-07!45;UBERON:0000480!1.48e-07!626;UBERON:0001637!1.79e-07!42;UBERON:0003509!1.79e-07!42;UBERON:0004572!1.79e-07!42;UBERON:0002049!6.05e-07!79;UBERON:0007798!6.05e-07!79 | |ontology_enrichment_uberon=UBERON:0002100!6.31e-17!216;UBERON:0005256!2.99e-16!143;UBERON:0000486!4.02e-16!82;UBERON:0003104!4.46e-16!238;UBERON:0009142!4.46e-16!238;UBERON:0000914!7.91e-16!83;UBERON:0002329!7.91e-16!83;UBERON:0003077!7.91e-16!83;UBERON:0003059!7.91e-16!83;UBERON:0007282!7.91e-16!83;UBERON:0009618!7.91e-16!83;UBERON:0007285!7.91e-16!83;UBERON:0004290!4.03e-14!70;UBERON:0000481!3.36e-13!347;UBERON:0000475!6.52e-13!365;UBERON:0001134!2.29e-11!61;UBERON:0002036!2.29e-11!61;UBERON:0003082!2.29e-11!61;UBERON:0002385!4.83e-11!63;UBERON:0001015!4.83e-11!63;UBERON:0000383!4.83e-11!63;UBERON:0000468!2.03e-10!659;UBERON:0003102!5.25e-10!95;UBERON:0003914!1.71e-09!118;UBERON:0004872!8.58e-09!84;UBERON:0000119!1.73e-08!312;UBERON:0000483!2.00e-08!309;UBERON:0003103!3.33e-08!69;UBERON:0000922!3.63e-08!612;UBERON:0000926!4.51e-08!448;UBERON:0004120!4.51e-08!448;UBERON:0006603!4.51e-08!448;UBERON:0002050!4.75e-08!605;UBERON:0005423!4.75e-08!605;UBERON:0000923!5.61e-08!604;UBERON:0005291!5.61e-08!604;UBERON:0006598!5.61e-08!604;UBERON:0002532!5.61e-08!604;UBERON:0000467!8.48e-08!625;UBERON:0006554!9.44e-08!44;UBERON:0001008!1.43e-07!45;UBERON:0000480!1.48e-07!626;UBERON:0001637!1.79e-07!42;UBERON:0003509!1.79e-07!42;UBERON:0004572!1.79e-07!42;UBERON:0002049!6.05e-07!79;UBERON:0007798!6.05e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;7.63e-07;30!UBERON:0001008;7.63e-07;30 | |||
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| ||
|short_description=p3@RAB34 | |short_description=p3@RAB34 | ||
}} | }} |
Latest revision as of 07:06, 19 September 2015
Short description: | p3@RAB34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAB34_5end |
Coexpression cluster: | C3622_Mesenchymal_Alveolar_Renal_Smooth_Osteoblast_Keratocytes_Hair |
Association with transcript: | -9bp_to_ENST00000395242_5end |
EntrezGene: | RAB34 |
HGNC: | 16519 |
UniProt: | A8MYQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.01e-20 | 250 |
mesodermal cell | 1.12e-15 | 121 |
fibroblast | 1.72e-15 | 76 |
muscle precursor cell | 3.97e-13 | 58 |
myoblast | 3.97e-13 | 58 |
multi-potent skeletal muscle stem cell | 3.97e-13 | 58 |
muscle cell | 9.84e-13 | 55 |
smooth muscle cell | 3.97e-12 | 43 |
smooth muscle myoblast | 3.97e-12 | 43 |
electrically responsive cell | 2.90e-11 | 61 |
electrically active cell | 2.90e-11 | 61 |
epithelial cell | 1.00e-10 | 253 |
vascular associated smooth muscle cell | 3.53e-10 | 32 |
extraembryonic cell | 5.39e-07 | 19 |
ectodermal cell | 6.37e-07 | 72 |