FFCP PHASE1:Hg19::chr3:58652465..58652479,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=131177 | |EntrezGene=131177 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18665 | |HGNC=18665 | ||
|TSSclassifier=strong | |||
|UniProt=C9JB68,Q96BQ1 | |UniProt=C9JB68,Q96BQ1 | ||
|association_with_transcript=81bp_to_ENST00000489857,NM_138805,uc003dkq.2_5end | |association_with_transcript=81bp_to_ENST00000489857,NM_138805,uc003dkq.2_5end | ||
|cluster_id=chr3:58652465..58652479,- | |||
|coexpression_cluster_id=C4340 | |||
|description=CAGE_peak_6_at_FAM3D_5end | |description=CAGE_peak_6_at_FAM3D_5end | ||
|id=chr3:58652465..58652479,- | |id=chr3:58652465..58652479,- | ||
|ontology_enrichment_celltype=CL:0002618!2.18e-07!3 | |ontology_enrichment_celltype=CL:0002618!2.18e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.94e-11;1!UBERON:0008801;5.30e-11;1!UBERON:0001045;6.44e-11;1!UBERON:0006298;6.44e-11;1!UBERON:0006242;9.05e-11;1!UBERON:0006595;5.44e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.97e-15!115;UBERON:0004921!3.50e-13!129;UBERON:0004185!3.50e-13!129;UBERON:0000059!2.59e-12!11;UBERON:0003127!3.94e-12!2;UBERON:0001829!6.76e-12!2;UBERON:0000341!1.76e-11!2;UBERON:0001007!1.86e-11!155;UBERON:0001555!1.86e-11!155;UBERON:0007026!1.86e-11!155;UBERON:0000160!4.93e-11!27;UBERON:0005409!1.89e-10!35;UBERON:0000078!3.38e-10!18;UBERON:0004119!4.07e-10!169;UBERON:0000925!4.07e-10!169;UBERON:0006595!4.07e-10!169;UBERON:0001155!6.09e-10!9;UBERON:0001044!9.09e-09!6;UBERON:0003293!9.09e-09!6;UBERON:0003294!9.09e-09!6;UBERON:0010047!9.09e-09!6;UBERON:0000167!9.09e-09!6;UBERON:0000166!1.19e-08!21;UBERON:0006947!3.19e-08!3;UBERON:0004054!3.19e-08!3;UBERON:0001723!7.39e-08!3;UBERON:0001033!7.39e-08!3;UBERON:0010056!7.39e-08!3;UBERON:0006562!9.56e-08!11;UBERON:0000998!6.23e-07!1;UBERON:0006868!6.23e-07!1;UBERON:0002372!8.21e-07!1;UBERON:0001961!8.21e-07!1;UBERON:0001744!8.21e-07!1;UBERON:0001735!8.21e-07!1;UBERON:0001831!8.67e-07!1;UBERON:0001567!8.67e-07!1;UBERON:0008801!8.67e-07!1;UBERON:0001736!9.15e-07!1;UBERON:0006298!9.15e-07!1;UBERON:0001154!9.67e-07!1;UBERON:0001153!9.67e-07!1 | |ontology_enrichment_uberon=UBERON:0007023!1.97e-15!115;UBERON:0004921!3.50e-13!129;UBERON:0004185!3.50e-13!129;UBERON:0000059!2.59e-12!11;UBERON:0003127!3.94e-12!2;UBERON:0001829!6.76e-12!2;UBERON:0000341!1.76e-11!2;UBERON:0001007!1.86e-11!155;UBERON:0001555!1.86e-11!155;UBERON:0007026!1.86e-11!155;UBERON:0000160!4.93e-11!27;UBERON:0005409!1.89e-10!35;UBERON:0000078!3.38e-10!18;UBERON:0004119!4.07e-10!169;UBERON:0000925!4.07e-10!169;UBERON:0006595!4.07e-10!169;UBERON:0001155!6.09e-10!9;UBERON:0001044!9.09e-09!6;UBERON:0003293!9.09e-09!6;UBERON:0003294!9.09e-09!6;UBERON:0010047!9.09e-09!6;UBERON:0000167!9.09e-09!6;UBERON:0000166!1.19e-08!21;UBERON:0006947!3.19e-08!3;UBERON:0004054!3.19e-08!3;UBERON:0001723!7.39e-08!3;UBERON:0001033!7.39e-08!3;UBERON:0010056!7.39e-08!3;UBERON:0006562!9.56e-08!11;UBERON:0000998!6.23e-07!1;UBERON:0006868!6.23e-07!1;UBERON:0002372!8.21e-07!1;UBERON:0001961!8.21e-07!1;UBERON:0001744!8.21e-07!1;UBERON:0001735!8.21e-07!1;UBERON:0001831!8.67e-07!1;UBERON:0001567!8.67e-07!1;UBERON:0008801!8.67e-07!1;UBERON:0001736!9.15e-07!1;UBERON:0006298!9.15e-07!1;UBERON:0001154!9.67e-07!1;UBERON:0001153!9.67e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;7.49e-29;33!UBERON:0000160;2.66e-25;17!UBERON:0000059;6.85e-22;11!UBERON:0003127;1.39e-20;2!UBERON:0001829;3.67e-20;2!UBERON:0005409;1.15e-19;22!UBERON:0001155;1.93e-17;9!UBERON:0001044;4.28e-15;6!UBERON:0003293;4.28e-15;6!UBERON:0003294;4.28e-15;6!UBERON:0010047;4.28e-15;6!UBERON:0003408;4.28e-15;6!UBERON:0000167;4.28e-15;6!UBERON:0006947;7.66e-14;3!UBERON:0004054;7.66e-14;3!UBERON:0001555;4.10e-13;54!UBERON:0000998;2.94e-11;1!UBERON:0006868;2.94e-11;1!UBERON:0002372;5.30e-11;1!UBERON:0001831;5.30e-11;1!UBERON:0001961;5.30e-11;1!UBERON:0001744;5.30e-11;1!UBERON:0001042;5.30e-11;1!UBERON:0001567;5.30e-11;1!UBERON:0001735;5.30e-11;1!UBERON:0001154;6.44e-11;1!UBERON:0001736;6.44e-11;1!UBERON:0001153;6.44e-11;1!UBERON:0009854;6.44e-11;1!UBERON:0001000;9.05e-11;1!UBERON:0005352;9.05e-11;1!UBERON:0001007;9.28e-11;81!UBERON:0005904;1.30e-10;4!UBERON:0004907;1.18e-08;5!UBERON:0000165;1.98e-08;28!UBERON:0002108;2.16e-08;4!UBERON:0000161;2.40e-08;19!UBERON:0000166;2.40e-08;19!UBERON:0001041;9.32e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.52e-25,17;UBERON:0000059,6.42e-22,11;UBERON:0003127,1.39e-20,2;UBERON:0001829,3.67e-20,2;UBERON:0001155,1.85e-17,9;UBERON:0005409,2.45e-17,25;UBERON:0001044,4.38e-15,6;UBERON:0003293,4.38e-15,6;UBERON:0003294,4.38e-15,6;UBERON:0010047,4.38e-15,6;UBERON:0000167,4.38e-15,6;UBERON:0007023,3.87e-14,114;UBERON:0006947,8.44e-14,3;UBERON:0004054,8.44e-14,3;UBERON:0004921,1.57e-13,118;UBERON:0001007,2.43e-12,145;UBERON:0001555,2.43e-12,145;UBERON:0007026,2.43e-12,145;UBERON:0000998,3.08e-11,1;UBERON:0006868,3.08e-11,1;UBERON:0002372,5.05e-11,1;UBERON:0001961,5.05e-11,1;UBERON:0001744,5.05e-11,1;UBERON:0001735,5.05e-11,1;UBERON:0001831,5.57e-11,1;UBERON:0001567,5.57e-11,1;UBERON:0008801,5.57e-11,1;UBERON:0004119,5.80e-11,160;UBERON:0000925,5.80e-11,160;UBERON:0006595,5.80e-11,160;UBERON:0001736,6.14e-11,1;UBERON:0006298,6.14e-11,1;UBERON:0001154,6.77e-11,1;UBERON:0001153,6.77e-11,1;UBERON:0001045,6.77e-11,1;UBERON:0000166,9.28e-11,22;UBERON:0001000,9.97e-11,1;UBERON:0005352,9.97e-11,1;UBERON:0005904,1.40e-10,4;UBERON:0003408,2.88e-09,10;UBERON:0004907,1.18e-08,5;UBERON:0002108,2.16e-08,4;UBERON:0000165,3.99e-08,29;UBERON:0000930,3.99e-08,29;UBERON:0011216,4.93e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,3.03912307084262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.95735737970654,2.91909962861019,14.664723478407,0,0,0,0,0,0,0,0,0,2.36750641709634,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0.225980740780532,0,0,0,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38606213485746,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,7.30526976407596,0,0,0.0714765441766563,0,0,0,0,0,0,0,8.60454717640555,0,0,9.31451510420044,0,0,0,0,0,1.46301509978723,0,0,0,0,0,0,0,0,0,0,2.16087642702245,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,3.21110498383179,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98527574661373,0.714193294391221,0,0,0,0,0,0.870866991587845,1.36893320434112,4.57993960499195,7.17222053926764,9.9798106963804,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,3.03912307084262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.95735737970654,2.91909962861019,14.664723478407,0,0,0,0,0,0,0,0,0,2.36750641709634,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0.225980740780532,0,0,0,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38606213485746,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,7.30526976407596,0,0,0.0714765441766563,0,0,0,0,0,0,0,8.60454717640555,0,0,9.31451510420044,0,0,0,0,0,1.46301509978723,0,0,0,0,0,0,0,0,0,0,2.16087642702245,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,3.21110498383179,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98527574661373,0.714193294391221,0,0,0,0,0,0.870866991587845,1.36893320434112,4.57993960499195,7.17222053926764,9.9798106963804,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@FAM3D | |short_description=p6@FAM3D | ||
}} | }} |
Latest revision as of 06:42, 19 September 2015
Short description: | p6@FAM3D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FAM3D_5end |
Coexpression cluster: | C4340_colon_seminal_salivary_trachea_parotid_rectum_small |
Association with transcript: | 81bp_to_ENST00000489857, NM_138805, uc003dkq.2_5end |
EntrezGene: | FAM3D |
HGNC: | 18665 |
UniProt: | C9JB68Q96BQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data