FFCP PHASE1:Hg19::chr8:82644669..82644738,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92421 | |EntrezGene=92421 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30599 | |HGNC=30599 | ||
|TSSclassifier=strong | |||
|UniProt=Q96CF2 | |UniProt=Q96CF2 | ||
|association_with_transcript=0bp_to_ENST00000297265,NM_152284,uc003ycl.2_5end | |association_with_transcript=0bp_to_ENST00000297265,NM_152284,uc003ycl.2_5end | ||
|cluster_id=chr8:82644669..82644738,+ | |||
|coexpression_cluster_id=C2015 | |coexpression_cluster_id=C2015 | ||
|description=CAGE_peak_1_at_CHMP4C_5end | |description=CAGE_peak_1_at_CHMP4C_5end | ||
|id=chr8:82644669..82644738,+ | |id=chr8:82644669..82644738,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.98e-41!254;CL:0000223!6.98e-18!59;CL:0002076!1.96e-16!43;CL:0002251!1.28e-08!21 | |ontology_enrichment_celltype=CL:0000066!2.98e-41!254;CL:0000223!6.98e-18!59;CL:0002076!1.96e-16!43;CL:0002251!1.28e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.28e-14;42!CL:0002251;2.85e-10;20!CL:0000082;4.60e-07;19!CL:0002368;5.48e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.60e-46,253;CL:0000223,1.36e-21,58;CL:0002076,2.45e-19,42;CL:0002251,2.83e-10,20;CL:0000082,4.32e-07,19;CL:0002368,5.26e-07,13 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.05e-12;29!CL:0000223;9.52e-12;58!UBERON:0006595;2.76e-11;86!UBERON:0001041;5.78e-09;30 | |||
|ontology_enrichment_disease=DOID:305!9.46e-35!106;DOID:0050687!1.90e-25!143;DOID:162!1.91e-12!235;DOID:14566!1.10e-11!239;DOID:299!4.03e-11!25;DOID:1749!6.01e-08!14 | |ontology_enrichment_disease=DOID:305!9.46e-35!106;DOID:0050687!1.90e-25!143;DOID:162!1.91e-12!235;DOID:14566!1.10e-11!239;DOID:299!4.03e-11!25;DOID:1749!6.01e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:299;9.20e-13;25!DOID:305;1.10e-11;106!DOID:1749;3.46e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.71e-39,106;DOID:0050687,3.20e-30,143;DOID:162,3.92e-15,235;DOID:14566,2.79e-14,239;DOID:299,7.56e-13,25;DOID:1749,3.49e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.85e-29!169;UBERON:0000925!2.85e-29!169;UBERON:0006595!2.85e-29!169;UBERON:0001007!2.00e-24!155;UBERON:0001555!2.00e-24!155;UBERON:0007026!2.00e-24!155;UBERON:0004921!2.72e-23!129;UBERON:0004185!2.72e-23!129;UBERON:0000077!3.76e-21!130;UBERON:0001041!9.10e-18!98;UBERON:0001004!2.53e-15!72;UBERON:0000062!1.72e-14!511;UBERON:0000466!2.18e-14!126;UBERON:0001048!8.27e-14!168;UBERON:0000464!5.59e-13!104;UBERON:0005911!1.64e-12!82;UBERON:0000065!8.74e-12!53;UBERON:0008947!2.67e-11!38;UBERON:0003258!2.67e-11!38;UBERON:0005177!3.74e-11!107;UBERON:0000481!3.93e-10!347;UBERON:0000922!1.70e-09!612;UBERON:0000072!3.09e-09!46;UBERON:0000468!3.27e-09!659;UBERON:0005153!3.86e-09!37;UBERON:0005409!4.05e-09!35;UBERON:0002050!1.87e-08!605;UBERON:0005423!1.87e-08!605;UBERON:0003104!2.42e-08!238;UBERON:0009142!2.42e-08!238;UBERON:0000923!3.23e-08!604;UBERON:0005291!3.23e-08!604;UBERON:0006598!3.23e-08!604;UBERON:0002532!3.23e-08!604;UBERON:0000064!3.67e-08!219;UBERON:0005157!5.70e-08!51;UBERON:0000063!6.11e-08!97;UBERON:0000480!8.34e-08!626;UBERON:0002553!9.27e-08!70;UBERON:0000467!9.99e-08!625;UBERON:0005156!1.44e-07!59;UBERON:0000990!1.44e-07!59;UBERON:0000160!2.46e-07!27;UBERON:0002048!3.75e-07!22;UBERON:0000117!3.75e-07!22;UBERON:0000171!3.75e-07!22;UBERON:0000170!3.75e-07!22;UBERON:0005597!3.75e-07!22;UBERON:0000118!3.75e-07!22;UBERON:0009569!5.70e-07!113;UBERON:0003133!8.19e-07!48 | |ontology_enrichment_uberon=UBERON:0004119!2.85e-29!169;UBERON:0000925!2.85e-29!169;UBERON:0006595!2.85e-29!169;UBERON:0001007!2.00e-24!155;UBERON:0001555!2.00e-24!155;UBERON:0007026!2.00e-24!155;UBERON:0004921!2.72e-23!129;UBERON:0004185!2.72e-23!129;UBERON:0000077!3.76e-21!130;UBERON:0001041!9.10e-18!98;UBERON:0001004!2.53e-15!72;UBERON:0000062!1.72e-14!511;UBERON:0000466!2.18e-14!126;UBERON:0001048!8.27e-14!168;UBERON:0000464!5.59e-13!104;UBERON:0005911!1.64e-12!82;UBERON:0000065!8.74e-12!53;UBERON:0008947!2.67e-11!38;UBERON:0003258!2.67e-11!38;UBERON:0005177!3.74e-11!107;UBERON:0000481!3.93e-10!347;UBERON:0000922!1.70e-09!612;UBERON:0000072!3.09e-09!46;UBERON:0000468!3.27e-09!659;UBERON:0005153!3.86e-09!37;UBERON:0005409!4.05e-09!35;UBERON:0002050!1.87e-08!605;UBERON:0005423!1.87e-08!605;UBERON:0003104!2.42e-08!238;UBERON:0009142!2.42e-08!238;UBERON:0000923!3.23e-08!604;UBERON:0005291!3.23e-08!604;UBERON:0006598!3.23e-08!604;UBERON:0002532!3.23e-08!604;UBERON:0000064!3.67e-08!219;UBERON:0005157!5.70e-08!51;UBERON:0000063!6.11e-08!97;UBERON:0000480!8.34e-08!626;UBERON:0002553!9.27e-08!70;UBERON:0000467!9.99e-08!625;UBERON:0005156!1.44e-07!59;UBERON:0000990!1.44e-07!59;UBERON:0000160!2.46e-07!27;UBERON:0002048!3.75e-07!22;UBERON:0000117!3.75e-07!22;UBERON:0000171!3.75e-07!22;UBERON:0000170!3.75e-07!22;UBERON:0005597!3.75e-07!22;UBERON:0000118!3.75e-07!22;UBERON:0009569!5.70e-07!113;UBERON:0003133!8.19e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0000065;1.49e-10;44!UBERON:0001004;1.24e-09;65!UBERON:0004921;2.17e-09;33!UBERON:0000072;3.46e-09;37!UBERON:0004807;1.52e-08;22!UBERON:0002048;6.22e-08;22!UBERON:0000117;6.22e-08;22!UBERON:0000171;6.22e-08;22!UBERON:0000170;6.22e-08;22!UBERON:0004802;4.60e-07;19!UBERON:0000115;4.60e-07;19!UBERON:0005911;4.88e-07;36!UBERON:0005178;8.39e-07;34!UBERON:0002224;8.39e-07;34!UBERON:0005181;8.75e-07;35 | |||
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| ||
|short_description=p1@CHMP4C | |short_description=p1@CHMP4C | ||
}} | }} |
Latest revision as of 06:32, 19 September 2015
Short description: | p1@CHMP4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHMP4C_5end |
Coexpression cluster: | C2015_small_squamous_amniotic_rectal_malignant_maxillary_oral |
Association with transcript: | 0bp_to_ENST00000297265, NM_152284, uc003ycl.2_5end |
EntrezGene: | CHMP4C |
HGNC: | 30599 |
UniProt: | Q96CF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.60e-46 | 253 |
endodermal cell | 1.36e-21 | 58 |
endo-epithelial cell | 2.45e-19 | 42 |
epithelial cell of alimentary canal | 2.83e-10 | 20 |
epithelial cell of lung | 4.32e-07 | 19 |
respiratory epithelial cell | 5.26e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.71e-39 | 106 |
cell type cancer | 3.20e-30 | 143 |
cancer | 3.92e-15 | 235 |
disease of cellular proliferation | 2.79e-14 | 239 |
adenocarcinoma | 7.56e-13 | 25 |
squamous cell carcinoma | 3.49e-09 | 14 |