FFCP PHASE1:Hg19::chr19:49658387..49658397,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:49658387..49658397,-
|short_description=p6@HRC
|description=CAGE_peak_6_at_HRC_5end
|association_with_transcript=248bp_to_BC112355_5end
|EntrezGene=3270
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3270 | |EntrezGene=3270 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5178 | |HGNC=5178 | ||
|TSSclassifier=strong | |||
|UniProt=Q2M1I0 | |UniProt=Q2M1I0 | ||
|association_with_transcript=248bp_to_BC112355_5end | |||
|cluster_id=chr19:49658387..49658397,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_6_at_HRC_5end | |||
|id=chr19:49658387..49658397,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
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|ontology_enrichment_disease=DOID:114!8.49e-21!2;DOID:178!3.08e-11!1;DOID:326!3.08e-11!1;DOID:3978!3.08e-11!1;DOID:3394!3.08e-11!1;DOID:5844!3.08e-11!1;DOID:1287!7.11e-11!4 | |||
|ontology_enrichment_disease_v019=DOID:114;2.28e-45;2!DOID:178;1.49e-23;1!DOID:326;1.49e-23;1!DOID:3978;1.49e-23;1!DOID:3394;1.49e-23;1!DOID:5844;1.49e-23;1!DOID:1287;2.78e-23;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.55e-45,2;DOID:178,1.67e-23,1;DOID:326,1.67e-23,1;DOID:3978,1.67e-23,1;DOID:3394,1.67e-23,1;DOID:5844,1.67e-23,1;DOID:1287,2.94e-23,4 | |||
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|short_description=p6@HRC | |||
}} | }} |
Latest revision as of 06:26, 19 September 2015
Short description: | p6@HRC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HRC_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 248bp_to_BC112355_5end |
EntrezGene: | HRC |
HGNC: | 5178 |
UniProt: | Q2M1I0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 2.55e-45 | 2 |
vascular disease | 1.67e-23 | 1 |
ischemia | 1.67e-23 | 1 |
extrinsic cardiomyopathy | 1.67e-23 | 1 |
myocardial ischemia | 1.67e-23 | 1 |
myocardial infarction | 1.67e-23 | 1 |
cardiovascular system disease | 2.94e-23 | 4 |