FFCP PHASE1:Hg19::chr19:49631781..49631818,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:49631781..49631818,+ to FFCP PHASE1:Hg19::chr19:49631781..49631818,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8541 | |EntrezGene=8541 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9247 | |HGNC=9247 | ||
|TSSclassifier=strong | |||
|UniProt=O75145 | |UniProt=O75145 | ||
|association_with_transcript=-286bp_to_uc002pms.2_5end | |||
|cluster_id=chr19:49631781..49631818,+ | |||
|description=CAGE_peak_3_at_PPFIA3_5end | |||
|id=chr19:49631781..49631818,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.53e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.19e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.20e-45!235;DOID:14566!2.75e-44!239;DOID:0050687!8.24e-30!143;DOID:0050686!7.91e-27!137;DOID:305!4.27e-20!106;DOID:2531!5.12e-20!51;DOID:0060083!5.12e-20!51;DOID:1240!6.65e-19!39;DOID:8692!7.05e-15!31;DOID:3095!2.77e-08!22;DOID:2994!2.77e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.54e-24;39!DOID:8692;9.36e-24;31!DOID:2531;6.05e-18;51!DOID:0060083;6.05e-18;51!DOID:1036;5.73e-10;8!DOID:3095;4.10e-08;22!DOID:2994;4.10e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.19e-35,235;DOID:14566,9.35e-34,239;DOID:1240,5.78e-30,39;DOID:2531,6.31e-28,51;DOID:0060083,6.31e-28,51;DOID:8692,5.21e-25,31;DOID:0050686,7.26e-23,137;DOID:0050687,1.63e-15,143;DOID:1036,4.26e-10,8;DOID:305,1.01e-09,106;DOID:3095,2.37e-08,22;DOID:2994,2.37e-08,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0.229240217243854,0.0821005894499457,0,0,0,0,0,0,0,1.54934401160603,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.722878304769133,0,0.144846518960824,0,0,0.189069634328136,0,0.263504357079378,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735326160691737,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.529636723252875,0,0,0,0,0.49333509683432,0,0.134710672069688,0,0.302714855289863,0,0.468642863667593,0,0.570471821544449,0.149448680551801,0.117434498643765,0.161872944368132,0.280901613404497,0.204154171254893,0,0,0,0,0.910161361938026,0,0,0.500474079487857,0,0,0.30648779579902,0,0.113432183160021,0.358779271377724,0,0,0,0.103052529238439,0.257640540045629,0.37223371266318,0.675105328965065,0.389748020644795,0,0,0.161646056818812,0,0,0,0.386521706326594,0,0,3.17131635936948,5.30119073285941,3.36962434321603,1.96956004529204,1.26160425437814,4.74470566798579,0,0,0,0,0,0.473227200159376,0.337169380156203,0.241011029883482,0.441175890929576,0.653638332277218,0.474541238222193,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0.441463099414651,0.245976877086227,0.171567810298526,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0.469634776943287,0,0,0,2.37061319387782,1.71697232418975,0.246217006087397,0,0.297262324577456,0,0.16798212819886,0,0,0,0,0,0.352193736052904,0,0,0.25248486685276,0.63497894292169,0,1.17217447210047,0,0.411309970813294,0.600686115687835,0.571652865261156,0.112131084345361,0,0.4400297149257,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.714889968290738,1.08524321078289,1.64648067356154,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0,0,0.179060963239896,1.00876629594175,0,0,0,0.76228387266739,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.384417447767103,1.02341449813341,0.160853921143607,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,2.65551447973196,2.80532299729999,0,0.650060246036521,0,0,0.308097234229289,0.307007349452259,0,0.214840489736547,1.0151168573996,0.340906509664404,0.534192213880424,0.165284915360978,0,0.382838137483752,0,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0.38126038784765,0.511795582622668,0,0,0.78494864019923,0.179872457583315,0,0.235624804691373,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0.75894634753143,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.961416640147258,11.5497582631603,4.6557641036396,2.41544127663434,1.58696134274089,0.995985806877798,5.42049327277996,0.199579371432817,0.5745161103971,5.08016598537319,2.921597462471,5.05434920604226,2.28234679033192,0.626719583092093,5.01268954180134,1.18504244461122,1.605880751037,1.21079824314629,1.27753871307098,1.71752672377882,1.22896305723383,1.78940886313933,2.0021897005429,3.71237381263877,0,0,1.08182271390393,1.6653598399891,8.45922030527097,4.49137296979728,0,4.24761826123297,0.66866030566487,0.568272293612826,0,0,0,0,0.422008249231538,0,2.14245036494787,1.26675244876796,0.398495976502139,0.276283915531148,0,0.102268682502155,0,0.622079175323615,0,1.07412704805365,3.5810065915881,0,0,1.11136990144637,0,0.0927680981618513,0,0.260427761085233,0.524759999977174,0,2.73104275885199,6.61059490761192,6.38246740773428,1.37897349296586,2.04123229368278,0.694499979733169,0,0.120596438625408,1.52581736317083,0,0.591095237907095,0,2.50558466093677,0,0.230850775511391,1.25336261431701,9.45312007991047,3.05175990993225,1.62971057883012,0.638002319463839,0.183195186803725,0,1.02193298195737,2.98262487150547,0.498635045700469,3.83512623049207,3.72518815203705,2.51732380463764,5.69261198172555,2.86085842164682,1.26598838716816,0.816164040795739,0.706765357169704,3.02944095638928,0,0.176915129006678,1.83309043480088,0.296521128680622,0.86494757262552,0.626531697032732,0.067401132980677,0.802577647298789,0,0.91227394607833,0.586993856796269,0.242780379534093,0,2.41981432097328,0,0.252746318513952,0.450970258243478,0.933193722575224,3.32326936353593,2.97892760287949,1.2557316736289,3.58417289318877,3.69992409838731,4.71493888244671,0.867798691675654,0.489961987071888,0.174118413160805,0,1.37588825977293,0.870806981601766,0.365446585430928,0.492692742319255,0.193978032976839,0.529536760149002,0.4519614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| ||
|short_description=p3@PPFIA3 | |||
}} | }} |
Latest revision as of 06:20, 19 September 2015
Short description: | p3@PPFIA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PPFIA3_5end |
Coexpression cluster: | NA |
Association with transcript: | -286bp_to_uc002pms.2_5end |
EntrezGene: | PPFIA3 |
HGNC: | 9247 |
UniProt: | O75145 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.19e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.19e-35 | 235 |
disease of cellular proliferation | 9.35e-34 | 239 |
leukemia | 5.78e-30 | 39 |
hematologic cancer | 6.31e-28 | 51 |
immune system cancer | 6.31e-28 | 51 |
myeloid leukemia | 5.21e-25 | 31 |
organ system cancer | 7.26e-23 | 137 |
cell type cancer | 1.63e-15 | 143 |
chronic leukemia | 4.26e-10 | 8 |
carcinoma | 1.01e-09 | 106 |
germ cell and embryonal cancer | 2.37e-08 | 22 |
germ cell cancer | 2.37e-08 | 22 |