FFCP PHASE1:Hg19::chr4:88450448..88450459,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8404 | |EntrezGene=8404 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11220 | |HGNC=11220 | ||
|TSSclassifier=strong | |||
|UniProt=F5H4Y3 | |UniProt=F5H4Y3 | ||
|association_with_transcript=-55bp_to_ENST00000543631_5end | |association_with_transcript=-55bp_to_ENST00000543631_5end | ||
|cluster_id=chr4:88450448..88450459,- | |||
|coexpression_cluster_id=C371 | |||
|description=CAGE_peak_7_at_SPARCL1_5end | |description=CAGE_peak_7_at_SPARCL1_5end | ||
|id=chr4:88450448..88450459,- | |id=chr4:88450448..88450459,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.97e-16;82!UBERON:0002532;1.33e-08;206!UBERON:0010316;1.33e-08;206!UBERON:0006603;2.67e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.59e-104!115;UBERON:0001049!2.14e-53!57;UBERON:0005068!2.14e-53!57;UBERON:0006241!2.14e-53!57;UBERON:0007135!2.14e-53!57;UBERON:0002616!5.95e-44!59;UBERON:0001017!1.08e-43!82;UBERON:0003080!7.87e-43!42;UBERON:0005743!2.62e-42!86;UBERON:0002780!1.65e-41!41;UBERON:0001890!1.65e-41!41;UBERON:0006240!1.65e-41!41;UBERON:0003075!1.62e-40!86;UBERON:0007284!1.62e-40!86;UBERON:0000955!9.43e-40!69;UBERON:0006238!9.43e-40!69;UBERON:0002346!7.94e-38!90;UBERON:0000073!2.00e-36!94;UBERON:0001016!2.00e-36!94;UBERON:0002020!2.70e-34!34;UBERON:0003528!2.70e-34!34;UBERON:0001893!5.57e-34!34;UBERON:0002791!1.05e-32!33;UBERON:0001869!7.32e-32!32;UBERON:0000153!3.91e-27!129;UBERON:0007811!3.91e-27!129;UBERON:0002619!4.71e-27!22;UBERON:0003056!9.85e-27!61;UBERON:0000033!4.51e-25!123;UBERON:0001950!2.06e-24!20;UBERON:0000956!5.35e-23!25;UBERON:0000203!5.35e-23!25;UBERON:0004121!1.10e-22!169;UBERON:0000924!1.18e-21!173;UBERON:0006601!1.18e-21!173;UBERON:0004111!3.00e-19!241;UBERON:0000477!3.56e-17!286;UBERON:0000025!1.24e-16!194;UBERON:0002420!2.35e-13!9;UBERON:0007245!2.35e-13!9;UBERON:0010009!2.35e-13!9;UBERON:0010011!2.35e-13!9;UBERON:0000454!2.35e-13!9;UBERON:0002308!5.87e-13!9;UBERON:0000125!5.87e-13!9;UBERON:0000481!4.04e-12!347;UBERON:0003076!1.57e-11!15;UBERON:0003057!1.57e-11!15;UBERON:0002298!2.95e-11!8;UBERON:0001871!3.52e-11!7;UBERON:0000062!8.37e-11!511;UBERON:0009663!1.44e-10!7;UBERON:0000483!6.44e-10!309;UBERON:0000475!9.10e-10!365;UBERON:0000200!1.11e-09!6;UBERON:0000119!1.30e-09!312;UBERON:0000064!3.23e-09!219;UBERON:0001894!7.64e-09!7;UBERON:0006222!7.64e-09!7;UBERON:0000468!1.53e-08!659;UBERON:0000349!3.02e-08!5;UBERON:0004733!3.40e-08!12;UBERON:0002028!3.40e-08!12;UBERON:0007277!3.40e-08!12;UBERON:0000467!1.03e-07!625;UBERON:0000480!1.21e-07!626;UBERON:0004732!2.15e-07!13;UBERON:0002021!2.25e-07!5;UBERON:0007100!2.63e-07!27;UBERON:0000369!6.24e-07!4;UBERON:0002435!6.24e-07!4;UBERON:0000204!6.24e-07!4;UBERON:0010082!6.24e-07!4 | |ontology_enrichment_uberon=UBERON:0007023!2.59e-104!115;UBERON:0001049!2.14e-53!57;UBERON:0005068!2.14e-53!57;UBERON:0006241!2.14e-53!57;UBERON:0007135!2.14e-53!57;UBERON:0002616!5.95e-44!59;UBERON:0001017!1.08e-43!82;UBERON:0003080!7.87e-43!42;UBERON:0005743!2.62e-42!86;UBERON:0002780!1.65e-41!41;UBERON:0001890!1.65e-41!41;UBERON:0006240!1.65e-41!41;UBERON:0003075!1.62e-40!86;UBERON:0007284!1.62e-40!86;UBERON:0000955!9.43e-40!69;UBERON:0006238!9.43e-40!69;UBERON:0002346!7.94e-38!90;UBERON:0000073!2.00e-36!94;UBERON:0001016!2.00e-36!94;UBERON:0002020!2.70e-34!34;UBERON:0003528!2.70e-34!34;UBERON:0001893!5.57e-34!34;UBERON:0002791!1.05e-32!33;UBERON:0001869!7.32e-32!32;UBERON:0000153!3.91e-27!129;UBERON:0007811!3.91e-27!129;UBERON:0002619!4.71e-27!22;UBERON:0003056!9.85e-27!61;UBERON:0000033!4.51e-25!123;UBERON:0001950!2.06e-24!20;UBERON:0000956!5.35e-23!25;UBERON:0000203!5.35e-23!25;UBERON:0004121!1.10e-22!169;UBERON:0000924!1.18e-21!173;UBERON:0006601!1.18e-21!173;UBERON:0004111!3.00e-19!241;UBERON:0000477!3.56e-17!286;UBERON:0000025!1.24e-16!194;UBERON:0002420!2.35e-13!9;UBERON:0007245!2.35e-13!9;UBERON:0010009!2.35e-13!9;UBERON:0010011!2.35e-13!9;UBERON:0000454!2.35e-13!9;UBERON:0002308!5.87e-13!9;UBERON:0000125!5.87e-13!9;UBERON:0000481!4.04e-12!347;UBERON:0003076!1.57e-11!15;UBERON:0003057!1.57e-11!15;UBERON:0002298!2.95e-11!8;UBERON:0001871!3.52e-11!7;UBERON:0000062!8.37e-11!511;UBERON:0009663!1.44e-10!7;UBERON:0000483!6.44e-10!309;UBERON:0000475!9.10e-10!365;UBERON:0000200!1.11e-09!6;UBERON:0000119!1.30e-09!312;UBERON:0000064!3.23e-09!219;UBERON:0001894!7.64e-09!7;UBERON:0006222!7.64e-09!7;UBERON:0000468!1.53e-08!659;UBERON:0000349!3.02e-08!5;UBERON:0004733!3.40e-08!12;UBERON:0002028!3.40e-08!12;UBERON:0007277!3.40e-08!12;UBERON:0000467!1.03e-07!625;UBERON:0000480!1.21e-07!626;UBERON:0004732!2.15e-07!13;UBERON:0002021!2.25e-07!5;UBERON:0007100!2.63e-07!27;UBERON:0000369!6.24e-07!4;UBERON:0002435!6.24e-07!4;UBERON:0000204!6.24e-07!4;UBERON:0010082!6.24e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.12e-31;41!UBERON:0001890;1.12e-31;41!UBERON:0001893;1.61e-30;34!UBERON:0003528;2.62e-30;34!UBERON:0002020;2.62e-30;34!UBERON:0002791;6.28e-30;32!UBERON:0001869;6.99e-30;32!UBERON:0007023;3.84e-29;114!UBERON:0000073;4.77e-29;53!UBERON:0002616;4.77e-29;53!UBERON:0002619;6.56e-27;22!UBERON:0001950;7.12e-24;20!UBERON:0000956;5.22e-23;25!UBERON:0000203;5.22e-23;25!UBERON:0001017;1.48e-18;75!UBERON:0000955;3.23e-18;68!UBERON:0002420;1.98e-15;9!UBERON:0007245;1.98e-15;9!UBERON:0010009;1.98e-15;9!UBERON:0010011;1.98e-15;9!UBERON:0000454;1.98e-15;9!UBERON:0000125;5.58e-15;9!UBERON:0002308;5.58e-15;9!UBERON:0001016;1.81e-14;83!UBERON:0009663;3.74e-12;7!UBERON:0000200;4.20e-11;6!UBERON:0001894;4.02e-10;7!UBERON:0002298;5.53e-10;6!UBERON:0004733;1.35e-09;12!UBERON:0002028;1.35e-09;12!UBERON:0000349;2.09e-09;5!UBERON:0001871;7.67e-09;6!UBERON:0004732;1.07e-08;13!UBERON:0011216;2.74e-08;132!UBERON:0000369;7.07e-08;4!UBERON:0002435;7.07e-08;4!UBERON:0000204;7.07e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.94e-113,114;UBERON:0001049,3.15e-57,56;UBERON:0005068,3.15e-57,56;UBERON:0006241,3.15e-57,56;UBERON:0007135,3.15e-57,56;UBERON:0000073,8.28e-53,53;UBERON:0002616,8.28e-53,53;UBERON:0002780,1.91e-44,41;UBERON:0001890,1.91e-44,41;UBERON:0003080,1.91e-44,41;UBERON:0006240,1.91e-44,41;UBERON:0001017,8.67e-42,81;UBERON:0000955,1.95e-41,68;UBERON:0006238,1.95e-41,68;UBERON:0003075,2.23e-41,82;UBERON:0007284,2.23e-41,82;UBERON:0002346,1.13e-38,86;UBERON:0003528,5.14e-36,34;UBERON:0002020,5.14e-36,34;UBERON:0001016,5.41e-36,89;UBERON:0001893,1.15e-35,34;UBERON:0010314,6.46e-34,132;UBERON:0001869,3.37e-33,32;UBERON:0002791,3.42e-33,32;UBERON:0010371,2.03e-30,104;UBERON:0003056,1.31e-27,61;UBERON:0002619,6.34e-27,22;UBERON:0001950,7.02e-24,20;UBERON:0000956,5.07e-23,25;UBERON:0000203,5.07e-23,25;UBERON:0011216,1.51e-22,223;UBERON:0004111,4.87e-19,240;UBERON:0004121,2.11e-18,171;UBERON:0000924,2.11e-18,171;UBERON:0006601,2.11e-18,171;UBERON:0000025,4.41e-18,192;UBERON:0002420,1.99e-15,9;UBERON:0007245,1.99e-15,9;UBERON:0010009,1.99e-15,9;UBERON:0010011,1.99e-15,9;UBERON:0000454,1.99e-15,9;UBERON:0000125,5.82e-15,9;UBERON:0002308,5.82e-15,9;UBERON:0003076,1.62e-13,15;UBERON:0003057,1.62e-13,15;UBERON:0009663,3.74e-12,7;UBERON:0000200,4.13e-11,6;UBERON:0001894,4.00e-10,7;UBERON:0006222,4.00e-10,7;UBERON:0000483,4.88e-10,306;UBERON:0002298,5.57e-10,6;UBERON:0000119,9.24e-10,309;UBERON:0004733,1.41e-09,12;UBERON:0002028,1.41e-09,12;UBERON:0007277,1.41e-09,12;UBERON:0000349,2.01e-09,5;UBERON:0001871,7.84e-09,6;UBERON:0004732,1.11e-08,13;UBERON:0000369,7.01e-08,4;UBERON:0002435,7.01e-08,4;UBERON:0000204,7.01e-08,4;UBERON:0010082,7.01e-08,4;UBERON:0002050,2.05e-07,564;UBERON:0000923,3.76e-07,560;UBERON:0010316,3.76e-07,560;UBERON:0005291,3.76e-07,560;UBERON:0006598,3.76e-07,560;UBERON:0010317,3.76e-07,560;UBERON:0002532,3.76e-07,560;UBERON:0000922,4.83e-07,592;UBERON:0005423,7.97e-07,581 | |||
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|short_description=p7@SPARCL1 | |short_description=p7@SPARCL1 | ||
}} | }} |
Latest revision as of 06:02, 19 September 2015
Short description: | p7@SPARCL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SPARCL1_5end |
Coexpression cluster: | C371_occipital_medial_brain_parietal_amygdala_frontal_olfactory |
Association with transcript: | -55bp_to_ENST00000543631_5end |
EntrezGene: | SPARCL1 |
HGNC: | 11220 |
UniProt: | F5H4Y3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data