FFCP PHASE1:Hg19::chr2:19558327..19558334,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130497 | |EntrezGene=130497 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8111 | |HGNC=8111 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAX0 | |UniProt=Q8TAX0 | ||
|association_with_transcript=37bp_to_NM_145260,uc002rdc.2_5end | |association_with_transcript=37bp_to_NM_145260,uc002rdc.2_5end | ||
|cluster_id=chr2:19558327..19558334,- | |||
|description=CAGE_peak_2_at_OSR1_5end | |description=CAGE_peak_2_at_OSR1_5end | ||
|id=chr2:19558327..19558334,- | |id=chr2:19558327..19558334,- | ||
|ontology_enrichment_celltype=CL:0000055!1.84e-24!180;CL:0000057!3.63e-19!75;CL:0000680!1.92e-14!57;CL:0000056!1.92e-14!57;CL:0000355!1.92e-14!57;CL:0000187!1.93e-13!54;CL:0000183!4.46e-13!59;CL:0000192!5.64e-12!42;CL:0000514!5.64e-12!42;CL:0000393!1.92e-10!60;CL:0000211!1.92e-10!60;CL:0000359!6.03e-10!32;CL:0002620!5.27e-08!23 | |ontology_enrichment_celltype=CL:0000055!1.84e-24!180;CL:0000057!3.63e-19!75;CL:0000680!1.92e-14!57;CL:0000056!1.92e-14!57;CL:0000355!1.92e-14!57;CL:0000187!1.93e-13!54;CL:0000183!4.46e-13!59;CL:0000192!5.64e-12!42;CL:0000514!5.64e-12!42;CL:0000393!1.92e-10!60;CL:0000211!1.92e-10!60;CL:0000359!6.03e-10!32;CL:0002620!5.27e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0000349;5.78e-08;19!CL:0002334;2.18e-07;12!CL:0000057;2.29e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.87e-16,76;CL:0000192,6.69e-08,43;CL:0000514,6.69e-08,43;CL:0000349,1.16e-07,19;CL:0002334,1.30e-07,12;CL:0000680,1.93e-07,58;CL:0000056,1.93e-07,58;CL:0000355,1.93e-07,58;CL:0000187,2.07e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.78e-20!83;UBERON:0002329!7.78e-20!83;UBERON:0003077!7.78e-20!83;UBERON:0003059!7.78e-20!83;UBERON:0007282!7.78e-20!83;UBERON:0009618!7.78e-20!83;UBERON:0007285!7.78e-20!83;UBERON:0004290!3.92e-19!70;UBERON:0000486!1.01e-16!82;UBERON:0001134!1.03e-15!61;UBERON:0002036!1.03e-15!61;UBERON:0003082!1.03e-15!61;UBERON:0002385!1.22e-15!63;UBERON:0001015!1.22e-15!63;UBERON:0000383!1.22e-15!63;UBERON:0005256!3.26e-13!143;UBERON:0002100!3.18e-12!216;UBERON:0003102!6.23e-12!95;UBERON:0003104!8.72e-12!238;UBERON:0009142!8.72e-12!238;UBERON:0004923!2.70e-10!57;UBERON:0000475!1.83e-09!365;UBERON:0000490!1.31e-08!138;UBERON:0004872!1.48e-08!84;UBERON:0000481!1.72e-08!347;UBERON:0000468!2.73e-08!659;UBERON:0000926!2.90e-08!448;UBERON:0004120!2.90e-08!448;UBERON:0006603!2.90e-08!448;UBERON:0002199!1.06e-07!45;UBERON:0002416!1.06e-07!45;UBERON:0005631!5.83e-07!14;UBERON:0000158!5.83e-07!14;UBERON:0007100!6.72e-07!27;UBERON:0000478!7.57e-07!24 | |ontology_enrichment_uberon=UBERON:0000914!7.78e-20!83;UBERON:0002329!7.78e-20!83;UBERON:0003077!7.78e-20!83;UBERON:0003059!7.78e-20!83;UBERON:0007282!7.78e-20!83;UBERON:0009618!7.78e-20!83;UBERON:0007285!7.78e-20!83;UBERON:0004290!3.92e-19!70;UBERON:0000486!1.01e-16!82;UBERON:0001134!1.03e-15!61;UBERON:0002036!1.03e-15!61;UBERON:0003082!1.03e-15!61;UBERON:0002385!1.22e-15!63;UBERON:0001015!1.22e-15!63;UBERON:0000383!1.22e-15!63;UBERON:0005256!3.26e-13!143;UBERON:0002100!3.18e-12!216;UBERON:0003102!6.23e-12!95;UBERON:0003104!8.72e-12!238;UBERON:0009142!8.72e-12!238;UBERON:0004923!2.70e-10!57;UBERON:0000475!1.83e-09!365;UBERON:0000490!1.31e-08!138;UBERON:0004872!1.48e-08!84;UBERON:0000481!1.72e-08!347;UBERON:0000468!2.73e-08!659;UBERON:0000926!2.90e-08!448;UBERON:0004120!2.90e-08!448;UBERON:0006603!2.90e-08!448;UBERON:0002199!1.06e-07!45;UBERON:0002416!1.06e-07!45;UBERON:0005631!5.83e-07!14;UBERON:0000158!5.83e-07!14;UBERON:0007100!6.72e-07!27;UBERON:0000478!7.57e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0004923;1.52e-07;55!UBERON:0002067;4.95e-07;9!UBERON:0000478;5.29e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,3.76e-11,71;UBERON:0003059,3.76e-11,71;UBERON:0007282,3.76e-11,71;UBERON:0004290,3.76e-11,71;UBERON:0009618,3.76e-11,71;UBERON:0003077,7.14e-11,72;UBERON:0007285,7.14e-11,72;UBERON:0007524,1.33e-10,73;UBERON:0004923,1.68e-10,66;UBERON:0000486,8.91e-10,83;UBERON:0007503,2.29e-09,78;UBERON:0003102,3.97e-08,99;UBERON:0005256,5.25e-08,122;UBERON:0005631,9.21e-08,14;UBERON:0000158,9.21e-08,14;UBERON:0002385,1.06e-07,64;UBERON:0001015,1.06e-07,64;UBERON:0000383,1.06e-07,64;UBERON:0002199,1.66e-07,46;UBERON:0002416,1.66e-07,46;UBERON:0004573,1.74e-07,33;UBERON:0004571,1.74e-07,33;UBERON:0001134,2.26e-07,62;UBERON:0002036,2.26e-07,62;UBERON:0003082,2.26e-07,62;UBERON:0004872,2.32e-07,83;UBERON:0004871,3.68e-07,8;UBERON:0002067,8.34e-07,9;UBERON:0004016,8.34e-07,9;UBERON:0010083,8.34e-07,9;UBERON:0000478,9.39e-07,24 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.281908808191942,0,1.34088328328186,1.74467704820074,0,3.15859936713415,1.04474251279935,0.737201809504527,0.697801167972428,7.64544802455603,8.17677632508206,0.618831764800233,0.662794751455832,1.34465029290355,0,0.730310090387373,0.975865597581014,0.123121058076788,0.612002073732759,0.313454721478088,0,0,0,0,0,0,0,0,0.309632246632152,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.40648818027883,0,0.50133791063589,0.869079113764942,0,0,0,0,0.087834785693126,0.327447688744282,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,1.3082821564276,0.993943903390637,1.2663051166458,4.50191214764944,1.43418310374407,2.4826786753885,1.12135520028461,0,0.24666754841716,2.48968828319813,0.134710672069688,0.163461903113459,0.605429710579726,0,0.468642863667593,3.1216007683032,2.2818872861778,2.98897361103602,0.704606991862589,1.13311061057692,1.12360645361799,1.02077085627447,0.61417158655884,1.75653827998801,0,1.48360157567134,1.82032272387605,0.718618141816238,1.34668891163253,0.375355559615893,1.10825646193673,0.877955241761676,1.83892677479412,1.65261864797256,0.907457465280168,0.717558542755448,1.06778694409284,1.90738711043606,0.900273288253207,1.33968288009971,0,0.930584281657949,0.337552664482532,0.0974370051611986,1.26216887122057,1.19664868234989,0.969876340912871,0,0.403008392910561,0.508681776931463,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,3.21620469096443,1.38134921352481,0.928735856063958,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0,0,0,0,2.4694440679884,1.47008711385542,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0,0.277765335475589,0.977424915930974,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,2.68675568108545,1.45316969256981,3.83382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,1.79409734952577,2.61576041299968,1.7601188597028,0,3.57656445851882,0.845302752556,0.531876233169741,0,0.257207374262142,1.41849132023278,0.799266537048298,0.714889968290738,3.25572963234866,0.823240336780769,0.977208552881205,1.06617584622764,0.791951872933429,2.71295439353627,6.10073421020206,3.39908170018994,0,0,0,0.958499421966331,1.14861935834114,2.85273810081437,1.30303176000821,0.821905290201534,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.813795071099207,1.24782516918484,0.892144943985809,0.473107245101804,1.40569697991256,0.902838299183157,0,1.03473071292505,0,0.553107505625109,0.695068915744663,4.89502893656851,5.14715135716284,0,0,0,2.12189300012382,4.99306318531491,11.1884408531982,0.496215615637554,0.767309866440312,1.12264037773229,1.53766979106841,0,1.12597744800525,1.48418066444991,1.85051632563187,4.79416658345443,2.7101961484557,1.55776328755086,1.51073491997947,0.120859449591622,0.200506470303285,0,0.34444334449382,0.546273504020151,2.49136388422906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,1.72279661398852,0,3.21367859688319,0.48335359146061,0.308097234229289,0.614014698904518,0,0.322260734604821,0.145016693914229,0.596586391912706,0.623224249527161,0.330569830721956,0,0,0.10115778085555,3.71876439437829,2.20368642781448,0,0.616067160352178,1.59691809095107,2.60979897622522,0.18532421910392,0.286249773483982,2.60510858551767,0.949138274156178,0.953150969619124,3.07077349573601,2.1396949401696,7.31867470229655,0.78494864019923,0.179872457583315,1.09814811894422,0.471249609382746,1.81964233415984,3.17020642346017,0,0.48763373908959,1.94970791705028,0,1.22849920267187,0.707027159768564,4.52032466480971,2.75682671773062,0.66343897524122,1.75380354101505,1.73632660280006,0,1.01455188481352,0.30982349809975,0.281695602532241,0.860468113224309,1.27723753317057,0.7133421029625,0.354761064070598,0.633322905892992,2.30506425071931,1.51789269506286,0.349934720244983,0.288666338176536,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.293016358543788,0,0,4.2620422020962,3.10367830158997,2.07875276582847,4.30024982938925,0,0,0.222617410045812,0,0.211125408127993,4.18420775327246,0.552567831062295,0,0.409074730008619,0,1.86623752597084,0.0898683511473268,0.358042349351218,0,1.479651084554,0,3.33410970433911,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0.683652335082007,0,0,0,0.638002319463839,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0.865554558968364,0,0.353830258013357,1.22206028986725,0,0,0,0,0.802577647298789,0,0,0,1.45668227720456,0.394584402849391,1.20990716048664,0,0.821425535170343,0,0,1.32930774541437,0,0.313932918407225,0,0,0.138674673013139,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.484945082442097,0.0882561266915003,0,0,0.19871461170299,0,0,0.320635281006135,1.0672649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| ||
|short_description=p2@OSR1 | |short_description=p2@OSR1 | ||
}} | }} |
Latest revision as of 06:01, 19 September 2015
Short description: | p2@OSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OSR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_NM_145260, uc002rdc.2_5end |
EntrezGene: | OSR1 |
HGNC: | 8111 |
UniProt: | Q8TAX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.87e-16 | 76 |
smooth muscle cell | 6.69e-08 | 43 |
smooth muscle myoblast | 6.69e-08 | 43 |
extraembryonic cell | 1.16e-07 | 19 |
preadipocyte | 1.30e-07 | 12 |
muscle precursor cell | 1.93e-07 | 58 |
myoblast | 1.93e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.93e-07 | 58 |
muscle cell | 2.07e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
somite | 3.76e-11 | 71 |
presomitic mesoderm | 3.76e-11 | 71 |
presumptive segmental plate | 3.76e-11 | 71 |
dermomyotome | 3.76e-11 | 71 |
trunk paraxial mesoderm | 3.76e-11 | 71 |
paraxial mesoderm | 7.14e-11 | 72 |
presumptive paraxial mesoderm | 7.14e-11 | 72 |
dense mesenchyme tissue | 1.33e-10 | 73 |
organ component layer | 1.68e-10 | 66 |
multilaminar epithelium | 8.91e-10 | 83 |
epithelial vesicle | 2.29e-09 | 78 |
surface structure | 3.97e-08 | 99 |
trunk mesenchyme | 5.25e-08 | 122 |
extraembryonic membrane | 9.21e-08 | 14 |
membranous layer | 9.21e-08 | 14 |
muscle tissue | 1.06e-07 | 64 |
musculature | 1.06e-07 | 64 |
musculature of body | 1.06e-07 | 64 |
integument | 1.66e-07 | 46 |
integumental system | 1.66e-07 | 46 |
systemic artery | 1.74e-07 | 33 |
systemic arterial system | 1.74e-07 | 33 |
skeletal muscle tissue | 2.26e-07 | 62 |
striated muscle tissue | 2.26e-07 | 62 |
myotome | 2.26e-07 | 62 |
splanchnic layer of lateral plate mesoderm | 2.32e-07 | 83 |
somatic layer of lateral plate mesoderm | 3.68e-07 | 8 |
dermis | 8.34e-07 | 9 |
dermatome | 8.34e-07 | 9 |
future dermis | 8.34e-07 | 9 |
extraembryonic structure | 9.39e-07 | 24 |