FFCP PHASE1:Hg19::chr4:88450351..88450368,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:88450351..88450368,- to FFCP PHASE1:Hg19::chr4:88450351..88450368,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8404 | |EntrezGene=8404 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11220 | |HGNC=11220 | ||
|TSSclassifier=strong | |||
|UniProt=F5H4Y3 | |UniProt=F5H4Y3 | ||
|association_with_transcript=24bp_to_ENST00000543631_5end | |||
|cluster_id=chr4:88450351..88450368,- | |||
|coexpression_cluster_id=C371 | |||
|description=CAGE_peak_2_at_SPARCL1_5end | |||
|id=chr4:88450351..88450368,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.67e-16;82!UBERON:0002532;1.82e-07;206!UBERON:0010316;1.82e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.46e-87!115;UBERON:0001049!2.07e-51!57;UBERON:0005068!2.07e-51!57;UBERON:0006241!2.07e-51!57;UBERON:0007135!2.07e-51!57;UBERON:0001017!1.45e-45!82;UBERON:0005743!8.17e-44!86;UBERON:0002616!1.83e-43!59;UBERON:0003080!2.74e-42!42;UBERON:0002780!2.06e-41!41;UBERON:0001890!2.06e-41!41;UBERON:0006240!2.06e-41!41;UBERON:0000073!7.07e-41!94;UBERON:0001016!7.07e-41!94;UBERON:0000955!8.53e-40!69;UBERON:0006238!8.53e-40!69;UBERON:0003075!6.66e-38!86;UBERON:0007284!6.66e-38!86;UBERON:0002346!2.60e-36!90;UBERON:0002020!1.12e-34!34;UBERON:0003528!1.12e-34!34;UBERON:0001893!1.76e-34!34;UBERON:0002791!2.20e-33!33;UBERON:0001869!1.38e-32!32;UBERON:0003056!1.91e-26!61;UBERON:0000153!1.60e-25!129;UBERON:0007811!1.60e-25!129;UBERON:0000956!5.63e-25!25;UBERON:0000203!5.63e-25!25;UBERON:0000033!4.79e-24!123;UBERON:0002619!6.20e-24!22;UBERON:0004121!1.76e-23!169;UBERON:0000924!5.36e-23!173;UBERON:0006601!5.36e-23!173;UBERON:0001950!1.04e-21!20;UBERON:0004111!2.21e-15!241;UBERON:0000025!4.61e-14!194;UBERON:0000477!6.11e-13!286;UBERON:0002420!3.01e-11!9;UBERON:0007245!3.01e-11!9;UBERON:0010009!3.01e-11!9;UBERON:0010011!3.01e-11!9;UBERON:0000454!3.01e-11!9;UBERON:0002308!4.25e-11!9;UBERON:0000125!4.25e-11!9;UBERON:0003076!2.54e-10!15;UBERON:0003057!2.54e-10!15;UBERON:0000062!5.41e-10!511;UBERON:0002298!1.35e-09!8;UBERON:0000481!3.27e-09!347;UBERON:0001871!3.38e-09!7;UBERON:0009663!5.19e-09!7;UBERON:0000064!1.43e-08!219;UBERON:0001894!3.12e-08!7;UBERON:0006222!3.12e-08!7;UBERON:0000200!3.47e-08!6;UBERON:0000468!4.14e-08!659;UBERON:0004732!6.25e-08!13;UBERON:0000475!6.87e-08!365;UBERON:0004733!2.84e-07!12;UBERON:0002028!2.84e-07!12;UBERON:0007277!2.84e-07!12;UBERON:0000349!4.53e-07!5;UBERON:0000467!7.54e-07!625;UBERON:0000480!9.04e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.69e-32;41!UBERON:0001890;6.69e-32;41!UBERON:0003528;3.65e-31;34!UBERON:0002020;3.65e-31;34!UBERON:0001893;4.13e-31;34!UBERON:0001869;7.13e-31;32!UBERON:0002791;7.94e-31;32!UBERON:0000073;1.47e-29;53!UBERON:0002616;1.47e-29;53!UBERON:0002619;6.20e-28;22!UBERON:0007023;7.76e-27;114!UBERON:0000956;1.57e-25;25!UBERON:0000203;1.57e-25;25!UBERON:0001950;2.61e-25;20!UBERON:0001017;3.38e-20;75!UBERON:0000955;4.28e-19;68!UBERON:0001016;3.12e-17;83!UBERON:0002420;5.72e-13;9!UBERON:0007245;5.72e-13;9!UBERON:0010009;5.72e-13;9!UBERON:0010011;5.72e-13;9!UBERON:0000454;5.72e-13;9!UBERON:0000125;8.59e-13;9!UBERON:0002308;8.59e-13;9!UBERON:0009663;2.45e-10;7!UBERON:0001894;2.02e-09;7!UBERON:0000200;2.29e-09;6!UBERON:0004732;2.49e-09;13!UBERON:0001871;3.35e-09;6!UBERON:0011216;4.50e-09;132!UBERON:0002298;6.81e-09;6!UBERON:0004733;1.49e-08;12!UBERON:0002028;1.49e-08;12!UBERON:0000349;4.70e-08;5!UBERON:0001872;4.11e-07;5!UBERON:0002021;5.17e-07;5!UBERON:0000369;9.35e-07;4!UBERON:0002435;9.35e-07;4!UBERON:0000204;9.35e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.10e-102,114;UBERON:0001049,6.25e-56,56;UBERON:0005068,6.25e-56,56;UBERON:0006241,6.25e-56,56;UBERON:0007135,6.25e-56,56;UBERON:0000073,8.52e-52,53;UBERON:0002616,8.52e-52,53;UBERON:0001017,1.17e-49,81;UBERON:0002780,1.01e-44,41;UBERON:0001890,1.01e-44,41;UBERON:0003080,1.01e-44,41;UBERON:0006240,1.01e-44,41;UBERON:0001016,4.35e-44,89;UBERON:0000955,1.37e-42,68;UBERON:0006238,1.37e-42,68;UBERON:0003075,1.32e-41,82;UBERON:0007284,1.32e-41,82;UBERON:0002346,5.42e-40,86;UBERON:0003528,8.20e-37,34;UBERON:0002020,8.20e-37,34;UBERON:0001893,1.37e-36,34;UBERON:0001869,2.29e-34,32;UBERON:0002791,2.72e-34,32;UBERON:0010314,7.76e-32,132;UBERON:0010371,1.06e-29,104;UBERON:0011216,1.31e-28,223;UBERON:0003056,2.68e-28,61;UBERON:0002619,6.33e-28,22;UBERON:0000956,1.64e-25,25;UBERON:0000203,1.64e-25,25;UBERON:0001950,2.66e-25,20;UBERON:0004121,1.05e-24,171;UBERON:0000924,1.05e-24,171;UBERON:0006601,1.05e-24,171;UBERON:0004111,2.26e-17,240;UBERON:0000025,1.64e-15,192;UBERON:0002420,5.72e-13,9;UBERON:0007245,5.72e-13,9;UBERON:0010009,5.72e-13,9;UBERON:0010011,5.72e-13,9;UBERON:0000454,5.72e-13,9;UBERON:0000125,8.59e-13,9;UBERON:0002308,8.59e-13,9;UBERON:0003076,3.66e-12,15;UBERON:0003057,3.66e-12,15;UBERON:0009663,2.45e-10,7;UBERON:0001894,2.02e-09,7;UBERON:0006222,2.02e-09,7;UBERON:0000200,2.29e-09,6;UBERON:0004732,2.51e-09,13;UBERON:0001871,3.29e-09,6;UBERON:0002298,6.81e-09,6;UBERON:0004733,1.50e-08,12;UBERON:0002028,1.50e-08,12;UBERON:0007277,1.50e-08,12;UBERON:0002050,3.82e-08,564;UBERON:0000349,4.70e-08,5;UBERON:0000923,5.54e-08,560;UBERON:0010316,5.54e-08,560;UBERON:0005291,5.54e-08,560;UBERON:0006598,5.54e-08,560;UBERON:0010317,5.54e-08,560;UBERON:0002532,5.54e-08,560;UBERON:0000922,1.14e-07,592;UBERON:0005423,1.18e-07,581;UBERON:0001872,4.19e-07,5;UBERON:0000483,4.22e-07,306;UBERON:0002021,5.27e-07,5;UBERON:0000119,7.56e-07,309;UBERON:0000369,9.35e-07,4;UBERON:0002435,9.35e-07,4;UBERON:0000204,9.35e-07,4;UBERON:0010082,9.35e-07,4 | |||
|phase1_expression=3.63356758541113,0.856402095563933,11.6992155399656,6.00439790118782,5.36353313312745,1.74467704820074,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0036519099174,0.684372125364421,0.502170558379211,0,0.164201178899891,0,0,0,0,0,0,0,0,17.4868155959528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.87019353423379,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,2.01210257911091,4.09160197899297,0,0,0,0,0,0,0,0,37.0015888281038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4713385134824,11.7402866686614,16.4013100254688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,61.9309960445535,0.942974704487816,23.7019759514515,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58805056424029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.621966330092223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31710916013264,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.829312462163088,1.15295962733569,1.38866676769018,0,0,0,0,0,4.80548892550268,0,0,0,0,0,0,10.988935783228,0,0,0,0,0,0.142977993658148,0,0,14.9838644775118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.36874410245144,11.712586847186,7.73288812777695,4.35542289869307,12.7587750330633,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,86.451408772439,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.1771595192975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,170.9750452103,0,0,0,0,0,0,614.383246319572,399.641812022267,0,0,0.844501632511974,107.593913655578,43.3765747383902,0,0,0,0,0,0,0,296.719364155896,0,0,96.9332746095218,795.76474603236,13.9729658600836,0,0,102.224940136306,0,0,0,9.65281445076101,0,0.868124974666461,527.016124559234,426.911392733944,238.02750865465,282.087692084554,115.559119010837,335.001501454116,0.21787692703798,0,283.253901552477,0,0,0,0,10.8460394308853,6.41183153813036,6.39641731222362,0,0,0,0,0,0,0,0,0,0,0,0,10.9478812418636,109.333549726127,49.4934417396237,0,0,0,103.932547056204,69.8242553149946,216.694612295939,0,0,0,71.8143613185891,21.7783288887595,8.57003732565372,113.67265675165,0,0,0,0,0,0,0,0.138674673013139,0,0,0,131.569181186249,0,0.0967563312890851,0,0,195.529857240654,0,68.2461837157208,0,0,605.124587746289,0,0,56.7784966006678,0,0,0,0,0,0,0,0,0,0,0,332.032419656514,223.292672972841,0,0,0,188.794903260044,188.599028961616,213.208288299314,17.7714310444102,39.4887964285645,274.724064110945,72.9612511205847,0,0,0,0,0,0,0.169346664131569,366.600887002089,509.400738857293,0,0,0,0,0,217.969409288992,0,50.9872926225812,2.41291105420991,0,0,0,110.777775587872,276.75444361275,0.25426853765475,0,0,0,0,0,0,0,4.68967147769864,0,314.028301002206,293.159678063544,0,0,257.678026525847,210.024951613154,60.4789020806905,38.7009497013322,0,0,0,33.7291038089074,64.1766128698112,32.4726311369269,34.7544988552393,0,670.753612235008,772.670309359231,634.217254959128,275.236413931234,342.88169830041,153.999079294631,1.93688088910723,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,515.150933101349,0,0.132864840313363,0,0,8.35627889762646,0,0,0,0,0,0,0,0,0,0.431299245586727,0,0,0,0,1.11542187833102,0,0,0,0,0,0,269.505828504744,811.921382345602,411.85535636745,299.675008155743,6.30179240554295,94.261335108729,470.055604434319,34.2646608621971,0,0,0,0,0,0,0.397832444232549,122.743255865988,0,10.9411961572633,0,0,0,316.481121521797,499.889983112862,688.887092738447,208.764847158341,11.4864709893826,10.9651553371436,190.545092501489,0,0,131.782651626059,206.814489164577,131.104570515112,232.443097369675,54.4632552798602,0,0.171488009437418,370.027226325872,147.659876648596,0,0,201.177796975867,471.661000927838,0,37.4395075408893,0,0,35.7382720883282,0,0,1.73858272302579,0,0.207216164163037,16.3889738010192,2.07377898544228,6.02318302348389,0.118332000730565,0,84.2540229879949,0,0,0,0,0,0,115.889761856633,124.221996296059,19.7168453327494,38.8568794447312,0,0,0,0,0,0,56.1827871025837,19.4518008848522,0,160.572150748808,0,553.982494198376,693.009251963092,302.621500949715,0,68.9841957972125,6.89699401317276,0,0,0,0,100.056085189773,21.1015470366089,245.540705938436,0,94.6441543457533,6.98161104544604,37.5609056765934,0,0,0,0.126166424835079,0.109265571963696,0.380095503034311,0,0,0,0,123.367720699294,5.62724673327975,162.517210133921,296.232100148468,64.8231304978982,36.661922445416,4.65040150819244,18.0637418600946,0,98.5258010145993,30.9239299106076,65.7504578648823,69.8155934213973,7.07196556653169,101.917253862993,71.52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|short_description=p2@SPARCL1 | |||
}} | }} |
Latest revision as of 05:57, 19 September 2015
Short description: | p2@SPARCL1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SPARCL1_5end |
Coexpression cluster: | C371_occipital_medial_brain_parietal_amygdala_frontal_olfactory |
Association with transcript: | 24bp_to_ENST00000543631_5end |
EntrezGene: | SPARCL1 |
HGNC: | 11220 |
UniProt: | F5H4Y3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data