FFCP PHASE1:Hg19::chr6:48036348..48036359,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=442213 | |EntrezGene=442213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21345 | |HGNC=21345 | ||
|TSSclassifier=strong | |||
|UniProt=B0QZ29 | |UniProt=B0QZ29 | ||
|association_with_transcript=20bp_to_ENST00000543600_5end | |association_with_transcript=20bp_to_ENST00000543600_5end | ||
|cluster_id=chr6:48036348..48036359,- | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_9_at_C6orf138_5end | |description=CAGE_peak_9_at_C6orf138_5end | ||
|id=chr6:48036348..48036359,- | |id=chr6:48036348..48036359,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;3.08e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!6.64e-47!32;UBERON:0005743!1.09e-45!86;UBERON:0000073!1.80e-45!94;UBERON:0001016!1.80e-45!94;UBERON:0001049!3.44e-45!57;UBERON:0005068!3.44e-45!57;UBERON:0006241!3.44e-45!57;UBERON:0007135!3.44e-45!57;UBERON:0001893!7.44e-44!34;UBERON:0002020!9.74e-44!34;UBERON:0003528!9.74e-44!34;UBERON:0003075!1.43e-43!86;UBERON:0007284!1.43e-43!86;UBERON:0002619!4.86e-43!22;UBERON:0001017!5.75e-43!82;UBERON:0002780!5.01e-42!41;UBERON:0001890!5.01e-42!41;UBERON:0006240!5.01e-42!41;UBERON:0002791!2.17e-41!33;UBERON:0002346!3.24e-41!90;UBERON:0003080!6.90e-41!42;UBERON:0000955!7.41e-41!69;UBERON:0006238!7.41e-41!69;UBERON:0003056!3.76e-39!61;UBERON:0000956!1.70e-37!25;UBERON:0000203!1.70e-37!25;UBERON:0002616!1.82e-37!59;UBERON:0001950!2.59e-37!20;UBERON:0000033!4.91e-31!123;UBERON:0000153!3.84e-29!129;UBERON:0007811!3.84e-29!129;UBERON:0004121!3.01e-28!169;UBERON:0000924!2.40e-27!173;UBERON:0006601!2.40e-27!173;UBERON:0007023!1.93e-21!115;UBERON:0000200!3.02e-19!6;UBERON:0000064!3.00e-12!219;UBERON:0001872!3.41e-11!5;UBERON:0002021!3.88e-11!5;UBERON:0002771!2.40e-10!3;UBERON:0001871!4.01e-10!7;UBERON:0000025!1.89e-09!194;UBERON:0000483!3.73e-09!309;UBERON:0000119!5.70e-09!312;UBERON:0000475!1.22e-08!365;UBERON:0002308!3.41e-08!9;UBERON:0000125!3.41e-08!9;UBERON:0001870!5.27e-08!2;UBERON:0001954!1.17e-07!2;UBERON:0003022!1.17e-07!2;UBERON:0002421!1.17e-07!2;UBERON:0002600!1.17e-07!2;UBERON:0000369!2.10e-07!4;UBERON:0002435!2.10e-07!4;UBERON:0000204!2.10e-07!4;UBERON:0010082!2.10e-07!4;UBERON:0009663!3.89e-07!7 | |ontology_enrichment_uberon=UBERON:0001869!6.64e-47!32;UBERON:0005743!1.09e-45!86;UBERON:0000073!1.80e-45!94;UBERON:0001016!1.80e-45!94;UBERON:0001049!3.44e-45!57;UBERON:0005068!3.44e-45!57;UBERON:0006241!3.44e-45!57;UBERON:0007135!3.44e-45!57;UBERON:0001893!7.44e-44!34;UBERON:0002020!9.74e-44!34;UBERON:0003528!9.74e-44!34;UBERON:0003075!1.43e-43!86;UBERON:0007284!1.43e-43!86;UBERON:0002619!4.86e-43!22;UBERON:0001017!5.75e-43!82;UBERON:0002780!5.01e-42!41;UBERON:0001890!5.01e-42!41;UBERON:0006240!5.01e-42!41;UBERON:0002791!2.17e-41!33;UBERON:0002346!3.24e-41!90;UBERON:0003080!6.90e-41!42;UBERON:0000955!7.41e-41!69;UBERON:0006238!7.41e-41!69;UBERON:0003056!3.76e-39!61;UBERON:0000956!1.70e-37!25;UBERON:0000203!1.70e-37!25;UBERON:0002616!1.82e-37!59;UBERON:0001950!2.59e-37!20;UBERON:0000033!4.91e-31!123;UBERON:0000153!3.84e-29!129;UBERON:0007811!3.84e-29!129;UBERON:0004121!3.01e-28!169;UBERON:0000924!2.40e-27!173;UBERON:0006601!2.40e-27!173;UBERON:0007023!1.93e-21!115;UBERON:0000200!3.02e-19!6;UBERON:0000064!3.00e-12!219;UBERON:0001872!3.41e-11!5;UBERON:0002021!3.88e-11!5;UBERON:0002771!2.40e-10!3;UBERON:0001871!4.01e-10!7;UBERON:0000025!1.89e-09!194;UBERON:0000483!3.73e-09!309;UBERON:0000119!5.70e-09!312;UBERON:0000475!1.22e-08!365;UBERON:0002308!3.41e-08!9;UBERON:0000125!3.41e-08!9;UBERON:0001870!5.27e-08!2;UBERON:0001954!1.17e-07!2;UBERON:0003022!1.17e-07!2;UBERON:0002421!1.17e-07!2;UBERON:0002600!1.17e-07!2;UBERON:0000369!2.10e-07!4;UBERON:0002435!2.10e-07!4;UBERON:0000204!2.10e-07!4;UBERON:0010082!2.10e-07!4;UBERON:0009663!3.89e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002021;6.15e-17;5!UBERON:0001950;1.68e-15;20!UBERON:0002619;3.43e-14;22!UBERON:0000956;1.34e-12;25!UBERON:0000203;1.34e-12;25!UBERON:0002791;2.41e-09;32!UBERON:0001869;3.25e-09;32!UBERON:0003528;4.95e-08;34!UBERON:0002020;4.95e-08;34!UBERON:0001870;6.56e-08;3!UBERON:0002114;6.56e-08;2!UBERON:0001893;2.86e-07;34!UBERON:0002780;4.31e-07;41!UBERON:0001890;4.31e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.91e-17,5;UBERON:0001950,1.58e-15,20;UBERON:0002619,3.26e-14,22;UBERON:0000956,1.28e-12,25;UBERON:0000203,1.28e-12,25;UBERON:0001016,2.08e-10,89;UBERON:0000955,3.39e-10,68;UBERON:0006238,3.39e-10,68;UBERON:0002791,5.10e-10,32;UBERON:0001869,5.10e-10,32;UBERON:0003528,1.82e-09,34;UBERON:0002020,1.82e-09,34;UBERON:0001893,1.82e-09,34;UBERON:0001017,1.40e-08,81;UBERON:0003056,4.15e-08,61;UBERON:0002780,6.13e-08,41;UBERON:0001890,6.13e-08,41;UBERON:0003080,6.13e-08,41;UBERON:0006240,6.13e-08,41;UBERON:0001870,6.78e-08,3;UBERON:0002114,7.26e-08,2;UBERON:0004121,6.15e-07,171;UBERON:0000924,6.15e-07,171;UBERON:0006601,6.15e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04337364477569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.278304294485554,3.99227596002388,0,0,0,0,0,0,0.344743373241465,0,0,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39283751102933,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.789744236554321,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0.886068179966986,0.854183854313742,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,1.09642024789354,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,1.94084660514027,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.321146125482298,0,0.478901577171454,1.43581454968528,2.7727886584389,0.414943514785307,0.645902582527404,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0.781078098613847,0,0.634158101939068,1.64092442705466,0,0,0,0,0,0,0,0,0,0,0,0,0.855046056317038,0,0,0,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0.611923411718232,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04337364477569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.278304294485554,3.99227596002388,0,0,0,0,0,0,0.344743373241465,0,0,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39283751102933,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.789744236554321,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0.886068179966986,0.854183854313742,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,1.09642024789354,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,1.94084660514027,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.321146125482298,0,0.478901577171454,1.43581454968528,2.7727886584389,0.414943514785307,0.645902582527404,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0.781078098613847,0,0.634158101939068,1.64092442705466,0,0,0,0,0,0,0,0,0,0,0,0,0.855046056317038,0,0,0,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0.611923411718232,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@C6orf138 | |short_description=p9@C6orf138 | ||
}} | }} |
Latest revision as of 04:17, 19 September 2015
Short description: | p9@C6orf138 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_C6orf138_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 20bp_to_ENST00000543600_5end |
EntrezGene: | C6orf138 |
HGNC: | 21345 |
UniProt: | B0QZ29 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 5.91e-17 | 5 |
neocortex | 1.58e-15 | 20 |
regional part of cerebral cortex | 3.26e-14 | 22 |
cerebral cortex | 1.28e-12 | 25 |
pallium | 1.28e-12 | 25 |
nervous system | 2.08e-10 | 89 |
brain | 3.39e-10 | 68 |
future brain | 3.39e-10 | 68 |
regional part of telencephalon | 5.10e-10 | 32 |
cerebral hemisphere | 5.10e-10 | 32 |
brain grey matter | 1.82e-09 | 34 |
gray matter | 1.82e-09 | 34 |
telencephalon | 1.82e-09 | 34 |
central nervous system | 1.40e-08 | 81 |
pre-chordal neural plate | 4.15e-08 | 61 |
regional part of forebrain | 6.13e-08 | 41 |
forebrain | 6.13e-08 | 41 |
anterior neural tube | 6.13e-08 | 41 |
future forebrain | 6.13e-08 | 41 |
frontal cortex | 6.78e-08 | 3 |
duodenum | 7.26e-08 | 2 |
ectoderm-derived structure | 6.15e-07 | 171 |
ectoderm | 6.15e-07 | 171 |
presumptive ectoderm | 6.15e-07 | 171 |