FFCP PHASE1:Hg19::chr7:6312206..6312308,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9265 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9504 | |||
|TSSclassifier=strong | |||
|UniProt=O43739 | |||
|association_with_transcript=0bp_to_ENST00000350796,ENST00000482460,NM_004227,uc003spt.2_5end | |||
|cluster_id=chr7:6312206..6312308,- | |||
|description=CAGE_peak_1_at_CYTH3_5end | |||
|id=chr7:6312206..6312308,- | |||
|ontology_enrichment_celltype=CL:0000057!2.58e-15!75;CL:0000055!1.18e-14!180;CL:0002620!6.75e-08!23;CL:0000327!5.22e-07!14;CL:0000499!8.39e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.82e-08;23!CL:0000327;2.24e-07;15!CL:0000499;3.78e-07;28!CL:0000057;4.84e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.16e-15,76;CL:0002620,6.75e-08,23;CL:0000327,2.36e-07,15;CL:0000499,3.92e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.50e-13!365;UBERON:0000062!1.37e-12!511;UBERON:0000064!2.24e-09!219;UBERON:0003102!3.61e-09!95;UBERON:0000481!2.87e-08!347;UBERON:0000468!9.47e-08!659;UBERON:0004121!1.14e-07!169;UBERON:0002097!2.00e-07!40;UBERON:0000033!3.20e-07!123;UBERON:0002199!3.49e-07!45;UBERON:0002416!3.49e-07!45;UBERON:0000924!4.44e-07!173;UBERON:0006601!4.44e-07!173 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.06e-09,99;UBERON:0010314,1.77e-08,132;UBERON:0002097,1.09e-07,41;UBERON:0002199,1.94e-07,46;UBERON:0002416,1.94e-07,46;UBERON:0004923,1.97e-07,66;UBERON:0004121,5.06e-07,171;UBERON:0000924,5.06e-07,171;UBERON:0006601,5.06e-07,171 | |||
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| |||
|short_description=p1@CYTH3 | |||
}} |
Latest revision as of 04:08, 19 September 2015
Short description: | p1@CYTH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYTH3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000350796, ENST00000482460, NM_004227, uc003spt.2_5end |
EntrezGene: | CYTH3 |
HGNC: | 9504 |
UniProt: | O43739 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.16e-15 | 76 |
skin fibroblast | 6.75e-08 | 23 |
extracellular matrix secreting cell | 2.36e-07 | 15 |
stromal cell | 3.92e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.06e-09 | 99 |
structure with developmental contribution from neural crest | 1.77e-08 | 132 |
skin of body | 1.09e-07 | 41 |
integument | 1.94e-07 | 46 |
integumental system | 1.94e-07 | 46 |
organ component layer | 1.97e-07 | 66 |
ectoderm-derived structure | 5.06e-07 | 171 |
ectoderm | 5.06e-07 | 171 |
presumptive ectoderm | 5.06e-07 | 171 |