FFCP PHASE1:Hg19::chr5:88179308..88179319,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:88179308..88179319,- to FFCP PHASE1:Hg19::chr5:88179308..88179319,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4208 | |EntrezGene=4208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6996 | |HGNC=6996 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAH2 | |UniProt=D6RAH2 | ||
|association_with_transcript=-6bp_to_ENST00000504921,uc003kjj.2,uc003kjk.2_5end | |||
|cluster_id=chr5:88179308..88179319,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_12_at_MEF2C_5end | |||
|id=chr5:88179308..88179319,- | |||
|ontology_enrichment_celltype=CL:0000945!2.35e-11!24;CL:0000826!2.35e-11!24;CL:0000236!1.31e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.13e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.22e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.12e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!2.58e-29!41;UBERON:0001890!2.58e-29!41;UBERON:0006240!2.58e-29!41;UBERON:0003080!2.76e-28!42;UBERON:0001869!2.17e-26!32;UBERON:0001049!3.52e-26!57;UBERON:0005068!3.52e-26!57;UBERON:0006241!3.52e-26!57;UBERON:0007135!3.52e-26!57;UBERON:0001893!8.56e-26!34;UBERON:0002791!9.60e-25!33;UBERON:0007023!1.68e-24!115;UBERON:0002619!3.14e-24!22;UBERON:0001017!4.67e-24!82;UBERON:0002020!1.47e-23!34;UBERON:0003528!1.47e-23!34;UBERON:0000955!4.19e-23!69;UBERON:0006238!4.19e-23!69;UBERON:0005743!5.35e-23!86;UBERON:0001950!3.48e-22!20;UBERON:0000956!6.80e-22!25;UBERON:0000203!6.80e-22!25;UBERON:0002616!7.25e-22!59;UBERON:0000073!8.03e-22!94;UBERON:0001016!8.03e-22!94;UBERON:0003056!4.58e-20!61;UBERON:0003075!4.82e-19!86;UBERON:0007284!4.82e-19!86;UBERON:0002346!1.56e-18!90;UBERON:0000033!2.23e-11!123;UBERON:0000153!3.17e-11!129;UBERON:0007811!3.17e-11!129;UBERON:0004121!1.51e-09!169;UBERON:0000924!1.69e-09!173;UBERON:0006601!1.69e-09!173;UBERON:0000200!4.54e-08!6;UBERON:0001871!7.06e-08!7;UBERON:0002021!3.29e-07!5;UBERON:0001872!3.98e-07!5;UBERON:0000349!7.06e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.83e-86;22!UBERON:0001950;2.71e-78;20!UBERON:0000956;1.76e-75;25!UBERON:0000203;1.76e-75;25!UBERON:0001869;3.71e-68;32!UBERON:0001893;5.15e-62;34!UBERON:0002791;5.72e-62;32!UBERON:0003528;6.75e-58;34!UBERON:0002020;6.75e-58;34!UBERON:0002780;1.97e-48;41!UBERON:0001890;1.97e-48;41!UBERON:0000073;1.39e-28;53!UBERON:0002616;1.39e-28;53!UBERON:0000200;3.54e-25;6!UBERON:0002021;3.03e-22;5!UBERON:0001871;5.00e-22;6!UBERON:0001872;1.01e-21;5!UBERON:0000349;4.88e-21;5!UBERON:0000955;1.91e-20;68!UBERON:0001017;2.67e-17;75!UBERON:0001016;2.33e-15;83!UBERON:0001870;3.27e-13;3!UBERON:0002771;8.60e-10;2!UBERON:0001876;1.44e-09;2!UBERON:0001954;2.85e-09;2!UBERON:0002702;2.85e-09;2!UBERON:0003022;2.85e-09;2!UBERON:0002421;2.85e-09;2!UBERON:0002600;2.85e-09;2!UBERON:0007023;2.25e-08;114!UBERON:0002420;1.18e-07;9!UBERON:0007245;1.18e-07;9!UBERON:0010009;1.18e-07;9!UBERON:0010011;1.18e-07;9!UBERON:0000454;1.18e-07;9!UBERON:0011216;9.19e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.49e-86,22;UBERON:0001950,9.24e-79,20;UBERON:0001869,4.79e-76,32;UBERON:0000956,9.78e-76,25;UBERON:0000203,9.78e-76,25;UBERON:0001893,2.39e-71,34;UBERON:0002791,6.76e-70,32;UBERON:0002780,2.87e-68,41;UBERON:0001890,2.87e-68,41;UBERON:0003080,2.87e-68,41;UBERON:0006240,2.87e-68,41;UBERON:0003528,1.46e-65,34;UBERON:0002020,1.46e-65,34;UBERON:0000073,1.25e-51,53;UBERON:0002616,1.25e-51,53;UBERON:0001049,1.45e-48,56;UBERON:0005068,1.45e-48,56;UBERON:0006241,1.45e-48,56;UBERON:0007135,1.45e-48,56;UBERON:0003056,1.30e-47,61;UBERON:0001017,8.45e-46,81;UBERON:0000955,4.94e-45,68;UBERON:0006238,4.94e-45,68;UBERON:0001016,2.25e-43,89;UBERON:0002346,1.74e-34,86;UBERON:0003075,7.53e-34,82;UBERON:0007284,7.53e-34,82;UBERON:0010371,2.42e-25,104;UBERON:0000200,2.88e-25,6;UBERON:0001871,2.85e-22,6;UBERON:0002021,3.86e-22,5;UBERON:0001872,7.70e-22,5;UBERON:0000349,6.18e-21,5;UBERON:0007023,8.03e-21,114;UBERON:0004121,9.52e-21,171;UBERON:0000924,9.52e-21,171;UBERON:0006601,9.52e-21,171;UBERON:0010314,2.99e-20,132;UBERON:0011216,1.53e-16,223;UBERON:0001870,1.93e-13,3;UBERON:0002771,6.63e-10,2;UBERON:0000025,8.03e-10,192;UBERON:0001876,9.81e-10,2;UBERON:0002702,2.13e-09,2;UBERON:0001954,4.35e-09,2;UBERON:0003022,4.35e-09,2;UBERON:0002421,4.35e-09,2;UBERON:0002600,4.35e-09,2;UBERON:0002420,9.51e-08,9;UBERON:0007245,9.51e-08,9;UBERON:0010009,9.51e-08,9;UBERON:0010011,9.51e-08,9;UBERON:0000454,9.51e-08,9 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.229240217243854,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0,0.293600439334847,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0.232429036905685,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0.22465726229299,0,0.16072558669708,0,0.19891667719909,0,3.51992488922645,0,0.889509253863555,1.28019066769952,0.800791974072025,0.574752439954483,1.32208974556972,0.954053754535364,1.1384259382189,1.76171156811282,0.382273228125229,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0.381988425558278,0,0,0.102827492703324,0.600686115687835,0.285826432630578,0,0,0,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,2.85273810081437,0,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,1.17261385734044,3.18969375826582,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0.215714200818617,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.27470839445503,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0.255679882248303,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0.649243880549111,0,0.456469358066384,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,1.4098700508785,0,0,0,0,0,0,0,0,5.96488588659779,1.96937182974718,0,0,0,0.597743964753209,0.552567831062295,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,1.11136990144637,0.969332746095218,3.24688343566479,7.98455192004777,0,0.0874599999961957,0,0,0,0,0,0.291604613383254,0,1.77148277162768,0.361789315876224,0,0.552896299656123,0,2.63262476584767,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0.457987967009312,0,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0.167821586975843,0,0.635746315921515,0,0,0,0.216388639742091,0,0,0.611030144933625,0,0,0,0.202203398942031,0,1.1713222286267,0,0,0,0,0,6.1214552326098,0.379119477770928,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,2.84898581801454,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.547621515567972,0,0,0,0,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,2.38568906942791,1.0896272488926,0,0,0,0,0,3.15897694621728,0,0.0788057072991982,0.0524545881349981,0.316801009558219,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0.992332043623902,0,0.365377795142688,0,0,0,0.306345576763462,0.327872630709804,0,2.65820453990096,3.53876168215693,1.6274820991845,0,0.221858103073705,0.558867626472451,0.138348634936231,0.124980407962107,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,2.76516872303461,0,0,0.163565394255844,0,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24802287837608,4.25089728976755,2.39450788585727,3.89721092057435,11.3432263299773,2.14387482639075,2.74508597574147,1.42769420259154,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,2.36381546164381,5.46754669029693,2.89361515101658,1.71222687523548,10.3925213713462,0,0,1.23109871051734,0,1.60710550763486,0.336283722218824,0.606965604236632,0.227662191351298,0,0.576169937778896,0,0.0679697329768317,2.23627430113687,0,0.111231401892069,0,0.785577949580009,0,0,0,0,0.142953088353313,0,0,0,0,0.414432328326074,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.490296643507811,0.235676547101626,0.785233868459781,0,0.4226557275834,0,0.281951753939561,0.128915775947154,0.699588091474503,0,0,0,2.19100916473955,0,0,0,2.58367662725476,10.4724165681691,0,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0.267964130156178,0,0.1034329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| ||
|short_description=p12@MEF2C | |||
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Latest revision as of 03:54, 19 September 2015
Short description: | p12@MEF2C |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_MEF2C_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -6bp_to_ENST00000504921, uc003kjj.2, uc003kjk.2_5end |
EntrezGene: | MEF2C |
HGNC: | 6996 |
UniProt: | D6RAH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.22e-07 | 14 |