FFCP PHASE1:Hg19::chr19:49219160..49219183,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:49219160..49219183,-
|short_description=p5@MAMSTR
|description=CAGE_peak_5_at_MAMSTR_5end
|association_with_transcript=-487bp_to_BC105056,BC105058,BC14344...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=284358 | |EntrezGene=284358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=26689 | |HGNC=26689 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZN01 | |UniProt=Q6ZN01 | ||
|association_with_transcript=-487bp_to_BC105056,BC105058,BC143443_5end | |||
|cluster_id=chr19:49219160..49219183,- | |||
|description=CAGE_peak_5_at_MAMSTR_5end | |||
|id=chr19:49219160..49219183,- | |||
|ontology_enrichment_celltype=CL:0000188!8.12e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000327;8.45e-10;15!CL:0000214;6.85e-09;3!CL:0000632;8.68e-09;3!CL:0000499;4.17e-07;28!CL:0002599;4.60e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000327,8.70e-10,15;CL:0000214,7.72e-09,3;CL:0000632,8.03e-09,3;CL:0002599,3.85e-07,1;CL:0000499,3.92e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.23e-07;1!DOID:4549;1.23e-07;1!DOID:5861;1.23e-07;1!DOID:6496;1.23e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.27e-07,1;DOID:4549,1.27e-07,1;DOID:5861,1.27e-07,1;DOID:6496,1.27e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004290!1.82e-07!70;UBERON:0000914!3.11e-07!83;UBERON:0002329!3.11e-07!83;UBERON:0003077!3.11e-07!83;UBERON:0003059!3.11e-07!83;UBERON:0007282!3.11e-07!83;UBERON:0009618!3.11e-07!83;UBERON:0007285!3.11e-07!83;UBERON:0000486!3.24e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;6.85e-09;3!UBERON:0007616;6.85e-09;3!UBERON:0002217;6.85e-09;3!UBERON:0002018;6.85e-09;3!UBERON:0001282;1.63e-07;1!UBERON:0009842;1.63e-07;1!UBERON:0003704;1.63e-07;1!UBERON:0001171;1.63e-07;1!UBERON:0001172;1.63e-07;1!UBERON:0005795;4.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,7.72e-09,3;UBERON:0007616,7.72e-09,3;UBERON:0002217,7.72e-09,3;UBERON:0002018,7.72e-09,3;UBERON:0001282,1.85e-07,1;UBERON:0009842,1.85e-07,1;UBERON:0003704,1.85e-07,1;UBERON:0001171,1.85e-07,1;UBERON:0001172,1.85e-07,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.383587685530591,0,0,0,0,0,0,0,0,0.851363990735132,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.573673241497627,1.06400514659507,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0.23486899728753,0.323745888736263,0,0,0.122834317311768,0.413303124703062,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0.757301322732344,0.0920498986422993,1.61646056818812,0,0,0.169560592310488,0,0.272746120590835,0,0,0.132529768321485,0,0,0,0,0,0,1.38134921352481,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0.399891964728228,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.695068915744663,0,3.0882908142977,0,0,0,0.303127571446259,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0,0.355123450626254,0.657017248110473,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48014585851639,0.616194468458578,0.307007349452259,0.275673144969061,0.644521469209642,1.16013355131383,0.767039646744908,4.62966585363034,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0.255897791311334,0.855877976067841,0.318203247925937,0,0.179872457583315,0.274537029736055,0,0,0,0,1.46290121726877,0,0,0.545999645631943,0,0,0.551365343546124,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,1.05553817648832,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70918513803957,3.84991942105343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,2.6699314784893,0,0,0,0.593929361665277,0,0,0,0,0,1.47787785689595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0.868124974666461,0,0,3.05163472634166,0.552896299656123,0.295547618953547,0,0,0,0.384751292518985,3.07643550786903,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,1.66409607615766,0,0.391969589657511,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,4.32455020788351,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,3.20702469264564,0,0,6.08837424270619,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.134366944973453,0,0,1.10296455230113,0.824158583811665,0.808842526250219,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0.714695326373367,0,7.37378759198775,0.542999601753713,0,0.326587360109409,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0.235265819698172,0,0,0.298509605773748,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0,0,0.318593534327405,0,0,0,0,0,0.601030435988874,0.380805212168795,0.406870733204662,0,0.322231671127465,1.39210127963548,0,0.800055529326307,1.03018711554838,0.673498977531838,0,0.963099152036517,0,0,0,0,0,0,0,2.19284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0.139879507719444,0,0,0,0.629063767423586,0,0,0,0.247871528518004,0,0,0,0.80057074828547,0.352675943690684,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,0,0.443511850813194,0,0,0,0.131545547125698,0,0,0.078493092850514,0,2.80272163313789,0,0,0,0.142953088353313,0,6.62576124598314,0,0,0.414432328326074,0,0,0,0.828324005113957,0.766920642832419,0,0,0,0,0,0.196300467230486,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,3.62874593044325,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.757786982182394,1.07185652062471,0,0,0.213233981900981,0.476128862927481,0,0.0620747142958579,0,0,0,0.217716747896961,1.02669990325584,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,1.22068853494722,0,0.603821380773079,0 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|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.383587685530591,0,0,0,0,0,0,0,0,0.851363990735132,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.573673241497627,1.06400514659507,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0.23486899728753,0.323745888736263,0,0,0.122834317311768,0.413303124703062,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0.757301322732344,0.0920498986422993,1.61646056818812,0,0,0.169560592310488,0,0.272746120590835,0,0,0.132529768321485,0,0,0,0,0,0,1.38134921352481,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0.399891964728228,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.695068915744663,0,3.0882908142977,0,0,0,0.303127571446259,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0,0.355123450626254,0.657017248110473,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48014585851639,0.616194468458578,0.307007349452259,0.275673144969061,0.644521469209642,1.16013355131383,0.767039646744908,4.62966585363034,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0.255897791311334,0.855877976067841,0.318203247925937,0,0.179872457583315,0.274537029736055,0,0,0,0,1.46290121726877,0,0,0.545999645631943,0,0,0.551365343546124,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,1.05553817648832,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70918513803957,3.84991942105343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,2.6699314784893,0,0,0,0.593929361665277,0,0,0,0,0,1.47787785689595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0.868124974666461,0,0,3.05163472634166,0.552896299656123,0.295547618953547,0,0,0,0.384751292518985,3.07643550786903,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,1.66409607615766,0,0.391969589657511,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,4.32455020788351,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,3.20702469264564,0,0,6.08837424270619,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.134366944973453,0,0,1.10296455230113,0.824158583811665,0.808842526250219,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0.714695326373367,0,7.37378759198775,0.542999601753713,0,0.326587360109409,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0.235265819698172,0,0,0.298509605773748,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0,0,0.318593534327405,0,0,0,0,0,0.601030435988874,0.380805212168795,0.406870733204662,0,0.322231671127465,1.39210127963548,0,0.800055529326307,1.03018711554838,0.673498977531838,0,0.963099152036517,0,0,0,0,0,0,0,2.19284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0.139879507719444,0,0,0,0.629063767423586,0,0,0,0.247871528518004,0,0,0,0.80057074828547,0.352675943690684,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,0,0.443511850813194,0,0,0,0.131545547125698,0,0,0.078493092850514,0,2.80272163313789,0,0,0,0.142953088353313,0,6.62576124598314,0,0,0.414432328326074,0,0,0,0.828324005113957,0.766920642832419,0,0,0,0,0,0.196300467230486,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,3.62874593044325,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.757786982182394,1.07185652062471,0,0,0.213233981900981,0.476128862927481,0,0.0620747142958579,0,0,0,0.217716747896961,1.02669990325584,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,1.22068853494722,0,0.603821380773079,0 | ||
|short_description=p5@MAMSTR | |||
}} | }} |
Latest revision as of 03:51, 19 September 2015
Short description: | p5@MAMSTR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MAMSTR_5end |
Coexpression cluster: | NA |
Association with transcript: | -487bp_to_BC105056, BC105058, BC143443_5end |
EntrezGene: | MAMSTR |
HGNC: | 26689 |
UniProt: | Q6ZN01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extracellular matrix secreting cell | 8.70e-10 | 15 |
synovial cell | 7.72e-09 | 3 |
hepatic stellate cell | 8.03e-09 | 3 |
smooth muscle cell of the esophagus | 3.85e-07 | 1 |
stromal cell | 3.92e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 7.72e-09 | 3 |
layer of synovial tissue | 7.72e-09 | 3 |
synovial joint | 7.72e-09 | 3 |
synovial membrane of synovial joint | 7.72e-09 | 3 |
intralobular bile duct | 1.85e-07 | 1 |
acinus | 1.85e-07 | 1 |
intrahepatic bile duct | 1.85e-07 | 1 |
portal lobule | 1.85e-07 | 1 |
hepatic acinus | 1.85e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.27e-07 | 1 |
extraosseous chondrosarcoma | 1.27e-07 | 1 |
myxoid chondrosarcoma | 1.27e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 1.27e-07 | 1 |