FFCP PHASE1:Hg19::chr2:98962912..98962924,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1261 | |EntrezGene=1261 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2150 | |HGNC=2150 | ||
|TSSclassifier=strong | |||
|UniProt=Q4VAP7 | |UniProt=Q4VAP7 | ||
|association_with_transcript=261bp_to_ENST00000436404_5end | |association_with_transcript=261bp_to_ENST00000436404_5end | ||
|cluster_id=chr2:98962912..98962924,+ | |||
|coexpression_cluster_id=C115 | |coexpression_cluster_id=C115 | ||
|description=CAGE_peak_2_at_CNGA3_5end | |description=CAGE_peak_2_at_CNGA3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000047!6.16e-07!8 | |ontology_enrichment_celltype=CL:0000047!6.16e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.55e-07;2 | |ontology_enrichment_celltype_v019=CL:0000047;4.55e-07;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.57e-16;3!UBERON:0003057;2.57e-16;3!UBERON:0006601;1.16e-08;82 | |ontology_enrichment_development_v019=UBERON:0006241;2.57e-16;3!UBERON:0003057;2.57e-16;3!UBERON:0006601;1.16e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.94e-63!82;UBERON:0005743!8.51e-63!86;UBERON:0001049!3.35e-61!57;UBERON:0005068!3.35e-61!57;UBERON:0006241!3.35e-61!57;UBERON:0007135!3.35e-61!57;UBERON:0000073!4.54e-59!94;UBERON:0001016!4.54e-59!94;UBERON:0000955!3.09e-48!69;UBERON:0006238!3.09e-48!69;UBERON:0002616!4.14e-48!59;UBERON:0002780!3.21e-46!41;UBERON:0001890!3.21e-46!41;UBERON:0006240!3.21e-46!41;UBERON:0003075!1.20e-45!86;UBERON:0007284!1.20e-45!86;UBERON:0003080!5.55e-45!42;UBERON:0002346!3.27e-43!90;UBERON:0001893!4.04e-35!34;UBERON:0002020!5.46e-35!34;UBERON:0003528!5.46e-35!34;UBERON:0003056!1.66e-34!61;UBERON:0002791!1.21e-32!33;UBERON:0001869!3.13e-30!32;UBERON:0004121!1.59e-28!169;UBERON:0000924!1.25e-27!173;UBERON:0006601!1.25e-27!173;UBERON:0007023!4.35e-26!115;UBERON:0000033!3.48e-25!123;UBERON:0000956!2.06e-24!25;UBERON:0000203!2.06e-24!25;UBERON:0000153!1.30e-23!129;UBERON:0007811!1.30e-23!129;UBERON:0002619!5.55e-21!22;UBERON:0002298!1.41e-19!8;UBERON:0003076!1.15e-16!15;UBERON:0003057!1.15e-16!15;UBERON:0001950!2.62e-16!20;UBERON:0000025!4.64e-16!194;UBERON:0003296!2.81e-15!4;UBERON:0010133!2.81e-15!4;UBERON:0001894!8.32e-13!7;UBERON:0006222!8.32e-13!7;UBERON:0002308!4.70e-12!9;UBERON:0000125!4.70e-12!9;UBERON:0004111!3.95e-11!241;UBERON:0002240!4.73e-11!3;UBERON:0001896!5.06e-11!3;UBERON:0005290!5.06e-11!3;UBERON:0010096!5.06e-11!3;UBERON:0006331!1.85e-10!3;UBERON:0000988!2.40e-10!3;UBERON:0001871!6.43e-10!7;UBERON:0004733!1.79e-09!12;UBERON:0002028!1.79e-09!12;UBERON:0007277!1.79e-09!12;UBERON:0000200!8.98e-09!6;UBERON:0000483!1.05e-08!309;UBERON:0004732!1.09e-08!13;UBERON:0000007!1.56e-08!2;UBERON:0000119!1.58e-08!312;UBERON:0001905!1.93e-08!2;UBERON:0002757!1.93e-08!2;UBERON:0010134!1.93e-08!2;UBERON:0002784!1.93e-08!2;UBERON:0005408!1.93e-08!2;UBERON:0001899!1.93e-08!2;UBERON:0000477!5.55e-08!286;UBERON:0001954!7.19e-08!2;UBERON:0003022!7.19e-08!2;UBERON:0002421!7.19e-08!2;UBERON:0002600!7.19e-08!2;UBERON:0002148!1.50e-07!2;UBERON:0009662!1.50e-07!2;UBERON:0000064!3.08e-07!219;UBERON:0009663!3.32e-07!7;UBERON:0005174!8.93e-07!5;UBERON:0001137!8.93e-07!5 | |ontology_enrichment_uberon=UBERON:0001017!5.94e-63!82;UBERON:0005743!8.51e-63!86;UBERON:0001049!3.35e-61!57;UBERON:0005068!3.35e-61!57;UBERON:0006241!3.35e-61!57;UBERON:0007135!3.35e-61!57;UBERON:0000073!4.54e-59!94;UBERON:0001016!4.54e-59!94;UBERON:0000955!3.09e-48!69;UBERON:0006238!3.09e-48!69;UBERON:0002616!4.14e-48!59;UBERON:0002780!3.21e-46!41;UBERON:0001890!3.21e-46!41;UBERON:0006240!3.21e-46!41;UBERON:0003075!1.20e-45!86;UBERON:0007284!1.20e-45!86;UBERON:0003080!5.55e-45!42;UBERON:0002346!3.27e-43!90;UBERON:0001893!4.04e-35!34;UBERON:0002020!5.46e-35!34;UBERON:0003528!5.46e-35!34;UBERON:0003056!1.66e-34!61;UBERON:0002791!1.21e-32!33;UBERON:0001869!3.13e-30!32;UBERON:0004121!1.59e-28!169;UBERON:0000924!1.25e-27!173;UBERON:0006601!1.25e-27!173;UBERON:0007023!4.35e-26!115;UBERON:0000033!3.48e-25!123;UBERON:0000956!2.06e-24!25;UBERON:0000203!2.06e-24!25;UBERON:0000153!1.30e-23!129;UBERON:0007811!1.30e-23!129;UBERON:0002619!5.55e-21!22;UBERON:0002298!1.41e-19!8;UBERON:0003076!1.15e-16!15;UBERON:0003057!1.15e-16!15;UBERON:0001950!2.62e-16!20;UBERON:0000025!4.64e-16!194;UBERON:0003296!2.81e-15!4;UBERON:0010133!2.81e-15!4;UBERON:0001894!8.32e-13!7;UBERON:0006222!8.32e-13!7;UBERON:0002308!4.70e-12!9;UBERON:0000125!4.70e-12!9;UBERON:0004111!3.95e-11!241;UBERON:0002240!4.73e-11!3;UBERON:0001896!5.06e-11!3;UBERON:0005290!5.06e-11!3;UBERON:0010096!5.06e-11!3;UBERON:0006331!1.85e-10!3;UBERON:0000988!2.40e-10!3;UBERON:0001871!6.43e-10!7;UBERON:0004733!1.79e-09!12;UBERON:0002028!1.79e-09!12;UBERON:0007277!1.79e-09!12;UBERON:0000200!8.98e-09!6;UBERON:0000483!1.05e-08!309;UBERON:0004732!1.09e-08!13;UBERON:0000007!1.56e-08!2;UBERON:0000119!1.58e-08!312;UBERON:0001905!1.93e-08!2;UBERON:0002757!1.93e-08!2;UBERON:0010134!1.93e-08!2;UBERON:0002784!1.93e-08!2;UBERON:0005408!1.93e-08!2;UBERON:0001899!1.93e-08!2;UBERON:0000477!5.55e-08!286;UBERON:0001954!7.19e-08!2;UBERON:0003022!7.19e-08!2;UBERON:0002421!7.19e-08!2;UBERON:0002600!7.19e-08!2;UBERON:0002148!1.50e-07!2;UBERON:0009662!1.50e-07!2;UBERON:0000064!3.08e-07!219;UBERON:0009663!3.32e-07!7;UBERON:0005174!8.93e-07!5;UBERON:0001137!8.93e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;4.00e-48;4!UBERON:0010133;4.00e-48;4!UBERON:0001894;1.08e-27;7!UBERON:0000007;3.44e-25;2!UBERON:0001905;8.49e-25;2!UBERON:0002757;8.49e-25;2!UBERON:0010134;8.49e-25;2!UBERON:0005408;8.49e-25;2!UBERON:0001899;8.49e-25;2!UBERON:0001896;2.57e-16;3!UBERON:0002240;2.57e-16;3!UBERON:0005174;2.57e-16;3!UBERON:0005290;2.57e-16;3!UBERON:0001137;2.57e-16;3!UBERON:0002784;6.64e-13;4!UBERON:0001017;8.91e-09;75!UBERON:0002298;1.26e-08;6!UBERON:0000955;1.65e-08;68!UBERON:0001016;4.42e-08;83 | |ontology_enrichment_uberon_v019=UBERON:0003296;4.00e-48;4!UBERON:0010133;4.00e-48;4!UBERON:0001894;1.08e-27;7!UBERON:0000007;3.44e-25;2!UBERON:0001905;8.49e-25;2!UBERON:0002757;8.49e-25;2!UBERON:0010134;8.49e-25;2!UBERON:0005408;8.49e-25;2!UBERON:0001899;8.49e-25;2!UBERON:0001896;2.57e-16;3!UBERON:0002240;2.57e-16;3!UBERON:0005174;2.57e-16;3!UBERON:0005290;2.57e-16;3!UBERON:0001137;2.57e-16;3!UBERON:0002784;6.64e-13;4!UBERON:0001017;8.91e-09;75!UBERON:0002298;1.26e-08;6!UBERON:0000955;1.65e-08;68!UBERON:0001016;4.42e-08;83 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,3.35e-48,4;UBERON:0010133,3.35e-48,4;UBERON:0001894,9.80e-28,7;UBERON:0006222,9.80e-28,7;UBERON:0000007,3.44e-25,2;UBERON:0001905,7.09e-25,2;UBERON:0002757,7.09e-25,2;UBERON:0010134,7.09e-25,2;UBERON:0005408,7.09e-25,2;UBERON:0001899,7.09e-25,2;UBERON:0001016,7.85e-20,89;UBERON:0001017,9.76e-19,81;UBERON:0001896,2.04e-16,3;UBERON:0005290,2.04e-16,3;UBERON:0010096,2.04e-16,3;UBERON:0002240,3.01e-16,3;UBERON:0005174,3.01e-16,3;UBERON:0001137,3.01e-16,3;UBERON:0001049,1.21e-15,56;UBERON:0005068,1.21e-15,56;UBERON:0006241,1.21e-15,56;UBERON:0007135,1.21e-15,56;UBERON:0002784,6.07e-13,4;UBERON:0003075,6.57e-13,82;UBERON:0007284,6.57e-13,82;UBERON:0000955,1.28e-12,68;UBERON:0006238,1.28e-12,68;UBERON:0003076,1.47e-12,15;UBERON:0003057,1.47e-12,15;UBERON:0002346,2.95e-12,86;UBERON:0000073,3.76e-10,53;UBERON:0002616,3.76e-10,53;UBERON:0010371,6.20e-10,104;UBERON:0011216,1.09e-09,223;UBERON:0004121,1.17e-09,171;UBERON:0000924,1.17e-09,171;UBERON:0006601,1.17e-09,171;UBERON:0002298,1.13e-08,6;UBERON:0010314,1.45e-07,132;UBERON:0002780,4.74e-07,41;UBERON:0001890,4.74e-07,41;UBERON:0003080,4.74e-07,41;UBERON:0006240,4.74e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,5.51589397186343,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.539209063845416,0,0.234264445725339,0,0,0,0,2.41981432097328,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,1.72022758707021,0.221858103073705,1.61450647647597,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.49945796605702,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.345786262321089,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.405225507710368,0,0,0.507326481551255,0.546974809018219,0,0,0,0,3.74991285114801,5.71682327772001,11.532346480496,9.1064876540519,0,0,0,0.203909198930495,0.328863867814245,0,0,0,0,0,0.913158720509496,0,0,0.428859265059938,3.00225862292181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53916723443601,0.150962843566674,0.231522474323834,0.437119121007915,0,0,0,1.17785080268967,0.297046400327086,1.6906229103336,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,2.61810414204226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,5.51589397186343,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.539209063845416,0,0.234264445725339,0,0,0,0,2.41981432097328,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,1.72022758707021,0.221858103073705,1.61450647647597,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.49945796605702,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.345786262321089,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.405225507710368,0,0,0.507326481551255,0.546974809018219,0,0,0,0,3.74991285114801,5.71682327772001,11.532346480496,9.1064876540519,0,0,0,0.203909198930495,0.328863867814245,0,0,0,0,0,0.913158720509496,0,0,0.428859265059938,3.00225862292181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53916723443601,0.150962843566674,0.231522474323834,0.437119121007915,0,0,0,1.17785080268967,0.297046400327086,1.6906229103336,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,2.61810414204226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@CNGA3 | |short_description=p2@CNGA3 | ||
}} | }} |
Latest revision as of 03:38, 19 September 2015
Short description: | p2@CNGA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CNGA3_5end |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | 261bp_to_ENST00000436404_5end |
EntrezGene: | CNGA3 |
HGNC: | 2150 |
UniProt: | Q4VAP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data