FFCP PHASE1:Hg19::chr10:72647629..72647647,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5092 | |EntrezGene=5092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8646 | |HGNC=8646 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=363bp_to_ENST00000493228_5end | |association_with_transcript=363bp_to_ENST00000493228_5end | ||
|cluster_id=chr10:72647629..72647647,- | |||
|description=CAGE_peak_4_at_PCBD1_5end | |description=CAGE_peak_4_at_PCBD1_5end | ||
|id=chr10:72647629..72647647,- | |id=chr10:72647629..72647647,- | ||
|ontology_enrichment_celltype=CL:0000055!1.73e-10!180;CL:0000183!2.27e-10!59;CL:0000187!2.69e-08!54;CL:0000680!7.01e-08!57;CL:0000056!7.01e-08!57;CL:0000355!7.01e-08!57;CL:0000057!6.09e-07!75 | |ontology_enrichment_celltype=CL:0000055!1.73e-10!180;CL:0000183!2.27e-10!59;CL:0000187!2.69e-08!54;CL:0000680!7.01e-08!57;CL:0000056!7.01e-08!57;CL:0000355!7.01e-08!57;CL:0000057!6.09e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000669;1.04e-10;4!CL:0002564;7.61e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,3.85e-10,4;CL:0002564,7.07e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!4.36e-10!347;UBERON:0005256!1.55e-09!143;UBERON:0000475!3.80e-08!365;UBERON:0000914!9.70e-08!83;UBERON:0002329!9.70e-08!83;UBERON:0003077!9.70e-08!83;UBERON:0003059!9.70e-08!83;UBERON:0007282!9.70e-08!83;UBERON:0009618!9.70e-08!83;UBERON:0007285!9.70e-08!83 | |ontology_enrichment_uberon=UBERON:0000481!4.36e-10!347;UBERON:0005256!1.55e-09!143;UBERON:0000475!3.80e-08!365;UBERON:0000914!9.70e-08!83;UBERON:0002329!9.70e-08!83;UBERON:0003077!9.70e-08!83;UBERON:0003059!9.70e-08!83;UBERON:0007282!9.70e-08!83;UBERON:0009618!9.70e-08!83;UBERON:0007285!9.70e-08!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;2.36e-13;5!UBERON:0002216;2.36e-13;5!UBERON:0011134;2.36e-13;5!UBERON:0002209;2.36e-13;5!UBERON:0002213;2.36e-13;5!UBERON:0007844;2.36e-13;5!UBERON:0011138;2.36e-13;5!UBERON:0001130;2.36e-13;5!UBERON:0001066;2.36e-13;5!UBERON:0001468;2.36e-13;5!UBERON:0004905;1.62e-11;8!UBERON:0000982;1.62e-11;8!UBERON:0004770;1.62e-11;8!UBERON:0003891;4.21e-11;4!UBERON:0002242;7.61e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.12e-13,5;UBERON:0002216,1.12e-13,5;UBERON:0011134,1.12e-13,5;UBERON:0002209,1.12e-13,5;UBERON:0002213,1.12e-13,5;UBERON:0005856,1.12e-13,5;UBERON:0005866,1.12e-13,5;UBERON:0005863,1.12e-13,5;UBERON:0007844,1.12e-13,5;UBERON:0011138,1.12e-13,5;UBERON:0001130,1.12e-13,5;UBERON:0001066,1.12e-13,5;UBERON:0001468,1.12e-13,5;UBERON:0004905,5.87e-12,8;UBERON:0000982,5.87e-12,8;UBERON:0004770,5.87e-12,8;UBERON:0003891,2.77e-10,4;UBERON:0003104,1.14e-09,160;UBERON:0009142,1.14e-09,160;UBERON:0002242,7.07e-09,3;UBERON:0003068,7.07e-09,3;UBERON:0002328,7.07e-09,3;UBERON:0004880,7.07e-09,3 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0.446961094427288,0,10.1319951267324,0.631719873426831,1.04474251279935,0.491467873003018,2.09340350391728,0,0,1.36142988256051,1.65698687863958,0,0.602694528023977,0,0,1.23121058076788,0.408001382488506,0.313454721478088,0.572471974262113,1.09499540058307,0.627713197974014,0.0764134057479513,0,0,0.393364276848904,0,0,0,0.30120591877825,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.411202997999018,0.334372990781356,0,0.473447805734733,0,0.111410456885174,0,0,0.541607727530031,0,0.130059347559878,0.328875809207352,0.276350017785848,0.289803085735052,0.593146252648242,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.255973222308837,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0.670700859703636,0.12786256184353,1.80719576192283,0.50133791063589,1.59331170856906,0,0,0.661743720148475,0.886917589850256,0.702678285545008,0.327447688744282,0,0,1.29818957461873,1.56716763569341,1.59549552622638,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.573673241497627,0.709336764396714,1.12135520028461,0,0,0,0.269421344139376,0.653847612453835,0.756787138224657,0.576175924479999,1.87457145467037,0.312160076830321,0,0,0.822041490506354,0.971237666208789,0.280901613404497,0.816616685019573,1.10550885580591,0.309977343527296,0,0.741800787835671,1.82032272387605,0,0.505008341862199,0.500474079487857,0,0.438977620880838,0.919463387397059,0.45071417671979,0.226864366320042,0.358779271377724,0.213557388818567,0.211931901159562,0.900273288253207,0.103052529238439,0,0.18611685633159,0,0.292311015483596,0.757301322732344,0.276149695926898,0,0.355009592516614,0.10075209822764,0.508681776931463,0,0,0,0,0.132529768321485,0.116193942869518,0.310983165046111,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0.168584690078102,0,0,0,0,0,0,0.38474715694639,0.738155454624648,0,1.2347220339942,4.41026134156626,15.2106041786197,0.982827216677626,1.18157981336281,0,0.122988438543114,0.343135620597051,0.219500570817251,0,0,0.0925884451585296,2.6064664424826,1.03993478527958,2.88662684050547,0.695582429850461,0.469634776943287,0.288732895522148,0,0,0,0,0.246217006087397,0.468008530278475,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0.336393253036082,0.87192013766656,0.1466765716419,0.258543431515556,0,0.845302752556,1.06375246633948,2.08014873822732,1.28603687131071,0,1.0656887160644,0.285955987316295,1.08524321078289,1.64648067356154,0,0,1.58390374586686,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.723906533337896,0,0,0.224170287987055,0,0,0.385029108839245,0.508189248444927,0,0,0.167516265334349,0,0,0,0,1.10422342547226,2.50085260529839,1.62759014219841,0,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,0,0,1.32845119707087,0,0.347534457872331,1.17480694477644,1.37257369524342,0,0.215714200818617,0,0,0,0.907170879989041,0,0.153461973288062,0.561320188866147,0.128139149255701,0,0,0,0.154209693802656,0,0.246381468041427,0,0,0,0,0,0.34444334449382,0.182091168006717,1.70461739447251,0.451199612907412,0.231046011313244,0,0,0,0,0.340187410553031,0.215915916102139,0,1.08378575017541,1.00337954770971,0,1.66215201785745,0.895499018888713,0,0,1.02580050046556,1.64007322849853,0.325378394664303,3.709476419318,0,0,0,0,0,0.193341436584244,0.308097234229289,0.767518373630648,1.10269257987624,1.07420244868274,1.59518363305651,0.255679882248303,0.356128142586949,0,0,0.127612712494584,0.2023155617111,2.32422774648643,0.62962469366128,0.6970372701606,1.23213432070436,0.532306030317022,0.869932992075073,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0.38126038784765,0.511795582622668,1.28381696410176,0.318203247925937,0,0.539617372749944,2.19629623788844,1.06031162111118,0.606547444719948,0,0,0.48763373908959,0.243713489631284,0,1.36499911407986,3.53513579884282,0,0,0,0,4.6302042741335,1.31178950409327,0.405820753925408,1.54911749049875,0.281695602532241,0.860468113224309,0.294747123039363,0,1.41904425628239,0.211107635297664,0.658589785919804,1.13841952129715,1.04980416073495,0,0,0,4.14232723417828,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0.648473311192717,0,0,0.640944426764839,0,0,0,0,0.142283686696828,0.318852545457645,0,0.191505370132367,1.05836791361941,0,0.280797178113459,0,0,2.50634477090067,0,0,0,0,0,0,0.223676107892416,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0.728163130497081,0,0.284136146806413,0.23874448473769,0.296964680832639,0,0,0.562677665642051,0,0,0,0,0,0.251932747854276,0,0,0.622079175323615,0.179736702294654,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.174919999992391,0.724999575434793,0,0,0,0.344743373241465,0,0.3472499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| ||
|short_description=p4@PCBD1 | |short_description=p4@PCBD1 | ||
}} | }} |
Latest revision as of 03:04, 19 September 2015
Short description: | p4@PCBD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PCBD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 363bp_to_ENST00000493228_5end |
EntrezGene: | PCBD1 |
HGNC: | 8646 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 3.85e-10 | 4 |
nucleus pulposus cell of intervertebral disc | 7.07e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 1.12e-13 | 5 |
symphysis | 1.12e-13 | 5 |
nonsynovial joint | 1.12e-13 | 5 |
fibrous joint | 1.12e-13 | 5 |
cartilaginous joint | 1.12e-13 | 5 |
developing mesenchymal condensation | 1.12e-13 | 5 |
pre-cartilage condensation | 1.12e-13 | 5 |
cartilaginous condensation | 1.12e-13 | 5 |
cartilage element | 1.12e-13 | 5 |
post-cranial axial skeletal system | 1.12e-13 | 5 |
vertebral column | 1.12e-13 | 5 |
intervertebral disk | 1.12e-13 | 5 |
intervertebral joint | 1.12e-13 | 5 |
articulation | 5.87e-12 | 8 |
skeletal joint | 5.87e-12 | 8 |
articular system | 5.87e-12 | 8 |
stroma | 2.77e-10 | 4 |
mesenchyme | 1.14e-09 | 160 |
entire embryonic mesenchyme | 1.14e-09 | 160 |
nucleus pulposus | 7.07e-09 | 3 |
axial mesoderm | 7.07e-09 | 3 |
notochord | 7.07e-09 | 3 |
chordamesoderm | 7.07e-09 | 3 |