FFCP PHASE1:Hg19::chr19:48614033..48614048,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:48614033..48614048,- to FFCP PHASE1:Hg19::chr19:48614033..48614048,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8605 | |EntrezGene=8605 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9037 | |HGNC=9037 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UP65,B4DI40 | |UniProt=Q9UP65,B4DI40 | ||
|association_with_transcript=60bp_to_ENST00000354276,NM_001159322,NM_001159323,NM_003706,uc002phx.2,uc002phy.3,uc010elr.2,uc010xzd.1_5end | |||
|cluster_id=chr19:48614033..48614048,- | |||
|description=CAGE_peak_3_at_PLA2G4C_5end | |||
|id=chr19:48614033..48614048,- | |||
|ontology_enrichment_celltype=CL:0002139!3.90e-15!24;CL:0000115!2.82e-13!35;CL:0002078!1.74e-11!44;CL:0000213!3.95e-11!57;CL:0000215!3.95e-11!57;CL:0000071!8.17e-11!18;CL:0002546!8.17e-11!18;CL:1000413!5.97e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.87e-20;24!CL:0000115;4.12e-17;36!CL:0000071;4.07e-13;18!CL:1000413;5.73e-11;9!CL:0002078;6.71e-10;45!CL:0000213;1.61e-09;58!CL:0000215;1.61e-09;58!CL:0002138;3.41e-09;6!CL:0002544;1.19e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.37e-20,24;CL:0000115,1.51e-19,36;CL:0000213,2.06e-15,58;CL:0000215,2.06e-15,58;CL:0002078,6.82e-15,45;CL:0000071,3.26e-13,18;CL:0002546,3.26e-13,18;CL:1000413,7.50e-11,9;CL:0005020,3.66e-09,6;CL:0002138,3.66e-09,6;CL:0005022,3.66e-09,6;CL:0002544,1.57e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;4.07e-13;18!CL:0005022;3.41e-09;6!UBERON:0006601;4.02e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.79e-25!115;UBERON:0004111!2.19e-20!241;UBERON:0000025!1.03e-18!194;UBERON:0001049!2.05e-16!57;UBERON:0005068!2.05e-16!57;UBERON:0006241!2.05e-16!57;UBERON:0007135!2.05e-16!57;UBERON:0000477!2.12e-16!286;UBERON:0002780!4.91e-13!41;UBERON:0001890!4.91e-13!41;UBERON:0006240!4.91e-13!41;UBERON:0003080!2.62e-12!42;UBERON:0002616!6.45e-12!59;UBERON:0002346!2.23e-11!90;UBERON:0003075!4.21e-11!86;UBERON:0007284!4.21e-11!86;UBERON:0005743!6.65e-11!86;UBERON:0001986!8.17e-11!18;UBERON:0004638!8.17e-11!18;UBERON:0004852!8.17e-11!18;UBERON:0000483!8.43e-11!309;UBERON:0000955!9.84e-11!69;UBERON:0006238!9.84e-11!69;UBERON:0000119!3.52e-10!312;UBERON:0001017!4.14e-10!82;UBERON:0002020!4.45e-10!34;UBERON:0003528!4.45e-10!34;UBERON:0001893!4.47e-10!34;UBERON:0000467!7.23e-10!625;UBERON:0000480!1.09e-09!626;UBERON:0000468!1.29e-09!659;UBERON:0002791!1.44e-09!33;UBERON:0000073!1.64e-09!94;UBERON:0001016!1.64e-09!94;UBERON:0001869!6.67e-09!32;UBERON:0000055!3.20e-08!69;UBERON:0000487!8.93e-08!22;UBERON:0002050!2.71e-07!605;UBERON:0005423!2.71e-07!605;UBERON:0000922!2.80e-07!612;UBERON:0002619!3.16e-07!22;UBERON:0004872!4.29e-07!84;UBERON:0000923!4.51e-07!604;UBERON:0005291!4.51e-07!604;UBERON:0006598!4.51e-07!604;UBERON:0002532!4.51e-07!604;UBERON:0003056!4.65e-07!61;UBERON:0003915!5.97e-07!9;UBERON:0004700!5.97e-07!9;UBERON:0001917!5.97e-07!9;UBERON:0000062!6.29e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.96e-15;53!UBERON:0002616;4.96e-15;53!UBERON:0001893;7.85e-15;34!UBERON:0002780;1.72e-14;41!UBERON:0001890;1.72e-14;41!UBERON:0003528;2.72e-14;34!UBERON:0002020;2.72e-14;34!UBERON:0002791;1.28e-13;32!UBERON:0001869;1.96e-13;32!UBERON:0004638;4.07e-13;18!UBERON:0001986;4.07e-13;18!UBERON:0004852;4.07e-13;18!UBERON:0002619;5.44e-12;22!UBERON:0003915;5.73e-11;9!UBERON:0004700;5.73e-11;9!UBERON:0001917;5.73e-11;9!UBERON:0001950;1.79e-10;20!UBERON:0000956;5.65e-10;25!UBERON:0000203;5.65e-10;25!UBERON:0000487;7.72e-10;22!UBERON:0000125;1.04e-09;9!UBERON:0002308;1.04e-09;9!UBERON:0007023;8.13e-09;114!UBERON:0000955;1.54e-08;68!UBERON:0001017;2.50e-08;75!UBERON:0004732;2.90e-08;13!UBERON:0006914;4.21e-08;25!UBERON:0009663;1.45e-07;7!UBERON:0002298;1.87e-07;6!UBERON:0002420;2.55e-07;9!UBERON:0007245;2.55e-07;9!UBERON:0010009;2.55e-07;9!UBERON:0010011;2.55e-07;9!UBERON:0000454;2.55e-07;9!UBERON:0004733;2.88e-07;12!UBERON:0002028;2.88e-07;12!UBERON:0001016;7.30e-07;83!UBERON:0000055;9.34e-07;65 | |||
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| ||
|short_description=p3@PLA2G4C | |||
}} | }} |
Latest revision as of 01:25, 19 September 2015
Short description: | p3@PLA2G4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLA2G4C_5end |
Coexpression cluster: | NA |
Association with transcript: | 60bp_to_ENST00000354276, NM_001159322, NM_001159323, NM_003706, uc002phx.2, uc002phy.3, uc010elr.2, uc010xzd.1_5end |
EntrezGene: | PLA2G4C |
HGNC: | 9037 |
UniProt: | Q9UP65B4DI40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.37e-20 | 24 |
endothelial cell | 1.51e-19 | 36 |
lining cell | 2.06e-15 | 58 |
barrier cell | 2.06e-15 | 58 |
meso-epithelial cell | 6.82e-15 | 45 |
blood vessel endothelial cell | 3.26e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.26e-13 | 18 |
endothelial cell of artery | 7.50e-11 | 9 |
lymphangioblast | 3.66e-09 | 6 |
endothelial cell of lymphatic vessel | 3.66e-09 | 6 |
vascular lymphangioblast | 3.66e-09 | 6 |
aortic endothelial cell | 1.57e-07 | 6 |