FFCP PHASE1:Hg19::chr7:55495648..55495658,+: Difference between revisions
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|id=chr7:55495648..55495658,+
|short_description=p18@LANCL2
|description=CAGE_peak_18_at_LANCL2_5end
|association_with_transcript=-90bp_to_ENST00000466041_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55915 | |EntrezGene=55915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6509 | |HGNC=6509 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-90bp_to_ENST00000466041_5end | |||
|cluster_id=chr7:55495648..55495658,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_18_at_LANCL2_5end | |||
|id=chr7:55495648..55495658,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005795;6.34e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.89e-09!7;UBERON:0006834!1.77e-08!1;UBERON:0002370!5.06e-08!4;UBERON:0005058!5.06e-08!4;UBERON:0009113!5.06e-08!4;UBERON:0003295!5.06e-08!4;UBERON:0005562!5.06e-08!4;UBERON:0002581!8.69e-08!1;UBERON:0002022!1.21e-07!1;UBERON:0001042!7.17e-07!10;UBERON:0009145!7.17e-07!10;UBERON:0000974!8.91e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;3.34e-66;1!UBERON:0002370;3.61e-34;2!UBERON:0005058;3.61e-34;2!UBERON:0009113;3.61e-34;2!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5!UBERON:0001871;9.43e-11;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,2.39e-66,1;UBERON:0002370,7.35e-18,4;UBERON:0005058,7.35e-18,4;UBERON:0009113,7.35e-18,4;UBERON:0003295,7.35e-18,4;UBERON:0005562,7.35e-18,4;UBERON:0003351,2.19e-12,6;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0001871,9.89e-11,6;UBERON:0000974,5.73e-08,10;UBERON:0003408,5.73e-08,10;UBERON:0001042,5.73e-08,10;UBERON:0009145,5.73e-08,10;UBERON:0006562,2.32e-07,11;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11 | |||
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|short_description=p18@LANCL2 | |||
}} | }} |
Latest revision as of 01:16, 19 September 2015
Short description: | p18@LANCL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_LANCL2_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -90bp_to_ENST00000466041_5end |
EntrezGene: | LANCL2 |
HGNC: | 6509 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus or analog | 2.39e-66 | 1 |
thymus | 7.35e-18 | 4 |
hemolymphoid system gland | 7.35e-18 | 4 |
thymic region | 7.35e-18 | 4 |
pharyngeal gland | 7.35e-18 | 4 |
thymus primordium | 7.35e-18 | 4 |
pharyngeal epithelium | 2.19e-12 | 6 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
temporal lobe | 9.89e-11 | 6 |
neck | 5.73e-08 | 10 |
gland of gut | 5.73e-08 | 10 |
chordate pharynx | 5.73e-08 | 10 |
pharyngeal region of foregut | 5.73e-08 | 10 |
pharynx | 2.32e-07 | 11 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |