FFCP PHASE1:Hg19::chr15:74494779..74494799,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:74494779..74494799,- to FFCP PHASE1:Hg19::chr15:74494779..74494799,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64220 | |EntrezGene=64220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30650 | |HGNC=30650 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BX79 | |UniProt=Q9BX79 | ||
|association_with_transcript=0bp_to_AF352728,AY359089_5end | |||
|cluster_id=chr15:74494779..74494799,- | |||
|coexpression_cluster_id=C3513 | |||
|description=CAGE_peak_2_at_STRA6_5end | |||
|id=chr15:74494779..74494799,- | |||
|ontology_enrichment_celltype=CL:0000133!1.07e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000349;7.60e-13;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.27e-13,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.45e-10!347;UBERON:0005631!6.44e-10!14;UBERON:0000158!6.44e-10!14;UBERON:0001032!5.34e-09!24;UBERON:0004456!5.34e-09!24;UBERON:0000478!1.37e-08!24;UBERON:0000020!1.41e-08!23;UBERON:0002200!3.27e-08!11;UBERON:0006876!3.27e-08!11;UBERON:0002104!7.05e-08!21;UBERON:0004923!1.54e-07!57;UBERON:0000970!1.85e-07!20;UBERON:0001048!3.13e-07!168;UBERON:0000019!5.85e-07!19;UBERON:0000047!5.85e-07!19;UBERON:0004088!5.85e-07!19;UBERON:0003072!5.85e-07!19;UBERON:0003071!5.85e-07!19;UBERON:0004128!5.85e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001032;5.47e-13;24!UBERON:0004456;5.47e-13;24!UBERON:0000478;1.11e-12;24!UBERON:0000020;2.62e-12;23!UBERON:0002104;2.97e-12;21!UBERON:0000970;1.43e-11;20!UBERON:0000019;9.77e-11;19!UBERON:0000047;9.77e-11;19!UBERON:0004088;9.77e-11;19!UBERON:0010230;9.77e-11;19!UBERON:0001456;1.14e-10;21!UBERON:0006876;2.20e-09;11!UBERON:0007625;1.28e-08;11!UBERON:0005631;4.27e-08;10!UBERON:0000158;4.27e-08;10!UBERON:0002203;5.35e-08;6!UBERON:0001768;5.35e-08;6!UBERON:0002200;5.35e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000020,6.15e-13,24;UBERON:0001032,6.15e-13,24;UBERON:0004456,6.15e-13,24;UBERON:0000478,1.22e-12,24;UBERON:0005631,2.58e-12,14;UBERON:0000158,2.58e-12,14;UBERON:0000970,3.11e-12,21;UBERON:0002104,3.11e-12,21;UBERON:0000019,2.13e-11,20;UBERON:0000047,2.13e-11,20;UBERON:0010312,2.13e-11,20;UBERON:0004088,2.13e-11,20;UBERON:0010230,2.13e-11,20;UBERON:0003072,2.13e-11,20;UBERON:0004128,2.13e-11,20;UBERON:0003071,2.13e-11,20;UBERON:0001456,3.01e-11,22;UBERON:0003124,9.93e-10,7;UBERON:0005085,1.39e-09,31;UBERON:0006876,1.93e-09,11;UBERON:0007625,1.19e-08,11;UBERON:0002203,4.47e-08,6;UBERON:0001768,4.47e-08,6;UBERON:0002200,4.47e-08,6;UBERON:0000966,7.47e-07,6;UBERON:0005388,7.47e-07,6;UBERON:0001802,7.47e-07,6 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.491467873003018,0.697801167972428,8.08233076881637,5.01157258634062,2.59909341216098,3.31397375727916,0,0.602694528023977,0,0,2.21617904538218,3.06001036866379,0.940364164434263,0,0.410623275218653,0.251085279189606,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36560687762909,0.639312809217652,0,0,0.289693037921647,0,0,7.27918092163323,3.76939975686359,2.54720878510066,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,2.86836620748814,0.354668382198357,3.36406560085384,3.20246987189115,1.97334038733728,0,0,0.163461903113459,21.1900398702904,21.31850920576,1.87457145467037,0,0,0,0,0,0,0,0.491337269247072,0.309977343527296,0,0,0.910161361938026,3.59309070908119,0.168336113954066,0.250237039743928,0,0,0,0,0.453728732640084,0.179389635688862,0,0,0,0,0.515281080091258,0.18611685633159,0,0,0.252433774244115,0,1.2931684545505,0.355009592516614,0,0.508681776931463,0,0,0.286804595389004,0.853815942907168,0.927708378250397,2.32387885739037,3.62813692553797,1.26160425437814,1.09493207722749,21.9029345261742,10.2918550110862,6.90674606762403,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,5.49016992955282,0,0,0,0,0.651616610620649,2.07986957055916,0,10.4337364477569,17.4938954411374,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,6.05507855464948,9.15516144549888,3.2268845761218,2.71470603091333,0,0,9.83971031364021,5.2003718455683,2.31486636835928,0,0.532844358032199,0.57191197463259,24.9605938480064,1.64648067356154,0,0.710783897485092,2.37585561880029,1.50719688529793,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,1.01637849688985,7.8083912314573,0,2.68026024534958,0,0,0,0,4.66227668532732,5.50187573165645,1.62759014219841,0.623912584592421,0.535286966391485,0.157702415033935,0.468565659970853,0,0,2.0694614258501,0,0.184369168541703,4.34418072340414,89.6769301179352,43.9223582477896,0,0,0,3.03127571446259,3.32870879020994,5.44302527993425,0,0,0,0,0,0.160853921143607,0,0,0.887808626565635,0.328508624055237,1.55776328755086,0.116210378459959,0.966875596732978,0,0,6.19998020088876,11.1075612484097,2.62248829918848,0,0,0,1.46139224653261,0.316654886678627,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,2.82095137628028,4.26419039409617,1.30151357865721,21.3294894110785,0,0,0,0,0,0,0.770243085573222,1.07452572308291,0.137836572484531,1.50388342815583,1.0151168573996,0.0852266274161009,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0,1.59691809095107,0.869932992075073,0.9266210955196,2.86249773483982,9.67611760335135,0.949138274156178,0.38126038784765,0,0,3.5002357271853,2.35484592059769,0.359744915166629,0,0.471249609382746,0.202182481573316,0,0,0.48763373908959,0.487426979262569,0,11.8754922924948,0.141405431953713,0,0,0,2.63070531152258,0,1.31178950409327,1.42037263873893,0,0.281695602532241,0.143411352204052,0.0982490410131212,0.35667105148125,1.77380532035299,0,0.329294892959902,3.79473173765715,6.99869440489966,0,0,0,19.8643419639004,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33150377598474,0,0,0,0,10.9214516591929,0,0.95497793895076,1.18785872333055,0.307160702099232,0,0,0,0,0,0.19924798825107,0.828851746593443,0.755798243562828,0,0.123084805461069,0,0.629078458031288,9.8461646071585,0,0.197286811273867,0,0,0,0,3.99227596002388,0,0,0,1.137934482855,1.01701460117107,2.83665218121524,6.55012409158783,0,0.347249989866585,0,0,0,0,0.295547618953547,0.219385397153973,0,0,1.76985594558733,0,1.38338342632836,1.6156375993759,5.97560545571044,8.61303131276183,13.6480414168775,4.26427820814908,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0.19566461893209,1.69946265673865,1.18375320854817,1.20990716048664,1.53036380815245,0.505492637027904,0.300646838828985,0.103688191397247,27.2508087809946,24.8243966906624,30.1375601670936,17.9208644659438,0.284609546029793,0,0,1.07791637155815,0,2.09672001890436,0,0,0,0,0.290967049465258,6.17792886840502,2.48578814858586,0,0,0.0633107959558787,7.43095254392251,0,0.213452994739353,10.789718917435,0.144090417154106,0,0.171594997861965,0,0,0,0.135904206073614,0.104602846312333,19.5836577861738,0.288950589901519,0,0,0,0,2.62887354279315,0.279282401272254,0,0.717873024576814,0,0,0,0.134366944973453,0,1.16495949527454,0.236349546921671,0.247247575143499,0.337017719270924,5.90564889088493,1.69346664131569,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0.157611414598396,0.419636705079985,0.211200673038813,0,0,0.714695326373367,0,0,0,0,0.979762080328227,0,0,0.85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|short_description=p2@STRA6 | |||
}} | }} |
Latest revision as of 00:39, 19 September 2015
Short description: | p2@STRA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_STRA6_5end |
Coexpression cluster: | C3513_Pericytes_placenta_embryonic_mesenchymal_Mesenchymal_neuroblastoma_Fibroblast |
Association with transcript: | 0bp_to_AF352728, AY359089_5end |
EntrezGene: | STRA6 |
HGNC: | 30650 |
UniProt: | Q9BX79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.27e-13 | 19 |
Ontology term | p-value | n |
---|---|---|
sense organ | 6.15e-13 | 24 |
sensory system | 6.15e-13 | 24 |
entire sense organ system | 6.15e-13 | 24 |
extraembryonic structure | 1.22e-12 | 24 |
extraembryonic membrane | 2.58e-12 | 14 |
membranous layer | 2.58e-12 | 14 |
eye | 3.11e-12 | 21 |
visual system | 3.11e-12 | 21 |
camera-type eye | 2.13e-11 | 20 |
simple eye | 2.13e-11 | 20 |
immature eye | 2.13e-11 | 20 |
ocular region | 2.13e-11 | 20 |
eyeball of camera-type eye | 2.13e-11 | 20 |
optic cup | 2.13e-11 | 20 |
optic vesicle | 2.13e-11 | 20 |
eye primordium | 2.13e-11 | 20 |
face | 3.01e-11 | 22 |
chorion | 9.93e-10 | 7 |
ectodermal placode | 1.39e-09 | 31 |
vasculature of organ | 1.93e-09 | 11 |
pigment epithelium of eye | 1.19e-08 | 11 |
vasculature of eye | 4.47e-08 | 6 |
uvea | 4.47e-08 | 6 |
vasculature of head | 4.47e-08 | 6 |
retina | 7.47e-07 | 6 |
photoreceptor array | 7.47e-07 | 6 |
posterior segment of eyeball | 7.47e-07 | 6 |