FFCP PHASE1:Hg19::chr17:19648827..19648857,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=218 | |EntrezGene=218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=405 | |HGNC=405 | ||
|TSSclassifier=strong | |||
|UniProt=C9JMC5 | |UniProt=C9JMC5 | ||
|association_with_transcript=-36bp_to_ENST00000439102_5end | |||
|cluster_id=chr17:19648827..19648857,- | |||
|description=CAGE_peak_5_at_ALDH3A1_5end | |||
|id=chr17:19648827..19648857,- | |||
|ontology_enrichment_celltype=CL:0002076!6.98e-13!43;CL:0000223!2.21e-11!59;CL:0002251!2.36e-10!21;CL:0000066!2.88e-10!254;CL:0002623!3.01e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002178;9.90e-14;3!CL:0002252;1.21e-10;1!CL:0002251;7.34e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.02e-13,3;CL:0002252,1.10e-10,1;CL:0002251,7.27e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.08e-11;1 | |||
|ontology_enrichment_disease=DOID:305!1.40e-12!106;DOID:0050687!1.84e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;2.26e-20;2!DOID:3151;2.79e-11;1!DOID:3149;2.79e-11;1!DOID:299;2.16e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.26e-20,2;DOID:3151,2.79e-11,1;DOID:3149,2.79e-11,1;DOID:299,1.99e-09,25;DOID:305,1.48e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001004!4.51e-18!72;UBERON:0001007!2.88e-17!155;UBERON:0001555!2.88e-17!155;UBERON:0007026!2.88e-17!155;UBERON:0004119!1.27e-16!169;UBERON:0000925!1.27e-16!169;UBERON:0006595!1.27e-16!169;UBERON:0000065!2.37e-16!53;UBERON:0004921!4.43e-15!129;UBERON:0004185!4.43e-15!129;UBERON:0001041!1.36e-14!98;UBERON:0000077!4.05e-14!130;UBERON:0000072!4.18e-13!46;UBERON:0008947!8.76e-12!38;UBERON:0003258!8.76e-12!38;UBERON:0001557!6.52e-11!19;UBERON:0007023!1.79e-10!115;UBERON:0005178!5.43e-08!34;UBERON:0002224!5.43e-08!34;UBERON:0000063!9.05e-08!97;UBERON:0005181!1.13e-07!35;UBERON:0000464!1.37e-07!104;UBERON:0001737!1.47e-07!9;UBERON:0002110!3.49e-07!3;UBERON:0006242!3.49e-07!3;UBERON:0000166!5.31e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001043;9.59e-14;3!UBERON:0001723;1.20e-13;3!UBERON:0001033;1.20e-13;3!UBERON:0001041;3.60e-11;14!UBERON:0002372;5.56e-11;1!UBERON:0001961;5.56e-11;1!UBERON:0001744;5.56e-11;1!UBERON:0001042;5.56e-11;1!UBERON:0001735;5.56e-11;1!UBERON:0000997;1.21e-10;1!UBERON:0005056;1.21e-10;1!UBERON:0004176;1.21e-10;1!UBERON:0000945;1.35e-08;5!UBERON:0010039;1.35e-08;5!UBERON:0004921;1.22e-07;33!UBERON:0000974;1.93e-07;6!UBERON:0001555;2.54e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,9.00e-14,3;UBERON:0009143,9.00e-14,3;UBERON:0001723,1.50e-13,3;UBERON:0001033,1.50e-13,3;UBERON:0010056,1.50e-13,3;UBERON:0002372,6.14e-11,1;UBERON:0001961,6.14e-11,1;UBERON:0001744,6.14e-11,1;UBERON:0001735,6.14e-11,1;UBERON:0000997,1.21e-10,1;UBERON:0005056,1.21e-10,1;UBERON:0001041,1.93e-09,87;UBERON:0001042,4.14e-09,10;UBERON:0009145,4.14e-09,10;UBERON:0006562,2.51e-08,11;UBERON:0004921,6.28e-08,118;UBERON:0001007,1.86e-07,145;UBERON:0001555,1.86e-07,145;UBERON:0007026,1.86e-07,145;UBERON:0000166,3.67e-07,22;UBERON:0005178,7.16e-07,34;UBERON:0002224,7.16e-07,34;UBERON:0000072,7.96e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0.441175890929576,0.653638332277218,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92064345569651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0.658156191461918,0,1.11538995422883,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,1.17590876897253,0,0.17472666824203,0,0.387025325156341,0.0730893170861856,0.164230914106418,7.46815426960829,0,0.677942222341597,0,0,0,0.195551382734803,0.64127056201227,0.85381197895741,0,2.01726584015748,0,0,0.288109595976299,0,13.4345599731573,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,8.72130187758092,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,6.84224395416894,0,0,0,0,0,0.300841313397029,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0.227662191351298,0,0,0.514464028312255,0,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0.85359238546975,0.691259661814092,0,0,0,0,0,0,0,0,3.14080747568778,5.36438869921985,0,0,0,0.971421986118279,0,0,0,2.71070596893504,0,0,0.463044948647668,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0,4.05144565611864,0,0.129177819672012,0.0620747142958579,0,0,0,4.78976845373315,1.02669990325584,3.09819443867103,1.93649954560226,0.332660356546013,0.244209805832924,0,0,0.179650404213174,0,0,0.813792356631477,0,0.201273793591026,0 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| ||
|short_description=p5@ALDH3A1 | |||
}} | }} |
Latest revision as of 00:38, 19 September 2015
Short description: | p5@ALDH3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ALDH3A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_ENST00000439102_5end |
EntrezGene: | ALDH3A1 |
HGNC: | 405 |
UniProt: | C9JMC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.02e-13 | 3 |
epithelial cell of esophagus | 1.10e-10 | 1 |
epithelial cell of alimentary canal | 7.27e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
esophagus | 9.00e-14 | 3 |
esophageal region | 9.00e-14 | 3 |
tongue | 1.50e-13 | 3 |
gustatory system | 1.50e-13 | 3 |
future tongue | 1.50e-13 | 3 |
tonsil | 6.14e-11 | 1 |
mucosa-associated lymphoid tissue | 6.14e-11 | 1 |
lymphoid tissue | 6.14e-11 | 1 |
tonsillar ring | 6.14e-11 | 1 |
mammalian vulva | 1.21e-10 | 1 |
external female genitalia | 1.21e-10 | 1 |
foregut | 1.93e-09 | 87 |
chordate pharynx | 4.14e-09 | 10 |
pharyngeal region of foregut | 4.14e-09 | 10 |
pharynx | 2.51e-08 | 11 |
subdivision of digestive tract | 6.28e-08 | 118 |
digestive system | 1.86e-07 | 145 |
digestive tract | 1.86e-07 | 145 |
primitive gut | 1.86e-07 | 145 |
oral opening | 3.67e-07 | 22 |
thoracic cavity element | 7.16e-07 | 34 |
thoracic cavity | 7.16e-07 | 34 |
segment of respiratory tract | 7.96e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.26e-20 | 2 |
skin squamous cell carcinoma | 2.79e-11 | 1 |
keratoacanthoma | 2.79e-11 | 1 |
adenocarcinoma | 1.99e-09 | 25 |
carcinoma | 1.48e-07 | 106 |