FFCP PHASE1:Hg19::chr12:52914170..52914185,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:52914170..52914185,- to FFCP PHASE1:Hg19::chr12:52914170..52914185,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3852 | |EntrezGene=3852 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6442 | |HGNC=6442 | ||
|TSSclassifier=strong | |||
|UniProt=E7EU87,F8VU69 | |UniProt=E7EU87,F8VU69 | ||
|association_with_transcript=0bp_to_ENST00000456000,ENST00000551275,ENST00000552629_5end | |||
|cluster_id=chr12:52914170..52914185,- | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_1_at_KRT5_5end | |||
|id=chr12:52914170..52914185,- | |||
|ontology_enrichment_celltype=CL:0002076!1.13e-17!43;CL:0000223!6.30e-12!59;CL:0002251!2.69e-09!21;CL:0000066!7.41e-09!254;CL:0002159!1.64e-08!13;CL:0002368!3.48e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;8.77e-16;42!CL:0002251;7.29e-11;20!CL:0002368;1.91e-10;13!CL:0002159;7.66e-10;14!CL:0000622;3.65e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.15e-21,42;CL:0000223,4.86e-14,58;CL:0002251,6.87e-11,20;CL:0000066,8.35e-11,253;CL:0002368,1.86e-10,13;CL:0002159,7.68e-10,14;CL:0000622,3.65e-07,5;CL:0000076,6.22e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;2.19e-08;58 | |||
|ontology_enrichment_disease=DOID:1749!1.45e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.90e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.75e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.43e-15!169;UBERON:0000925!2.43e-15!169;UBERON:0006595!2.43e-15!169;UBERON:0001004!2.84e-14!72;UBERON:0007023!8.46e-11!115;UBERON:0001007!6.93e-10!155;UBERON:0001555!6.93e-10!155;UBERON:0007026!6.93e-10!155;UBERON:0000065!1.55e-09!53;UBERON:0000161!1.58e-09!35;UBERON:0000077!1.63e-09!130;UBERON:0000166!6.79e-09!21;UBERON:0000922!7.86e-09!612;UBERON:0004921!1.26e-08!129;UBERON:0004185!1.26e-08!129;UBERON:0000062!1.26e-08!511;UBERON:0002050!1.90e-08!605;UBERON:0005423!1.90e-08!605;UBERON:0000165!1.92e-08!28;UBERON:0000930!1.92e-08!28;UBERON:0005181!2.74e-08!35;UBERON:0000480!3.31e-08!626;UBERON:0000923!4.05e-08!604;UBERON:0005291!4.05e-08!604;UBERON:0006598!4.05e-08!604;UBERON:0002532!4.05e-08!604;UBERON:0000467!5.01e-08!625;UBERON:0005178!7.36e-08!34;UBERON:0002224!7.36e-08!34;UBERON:0005631!1.23e-07!14;UBERON:0000158!1.23e-07!14;UBERON:0001041!1.86e-07!98;UBERON:0000468!2.03e-07!659;UBERON:0003102!2.57e-07!95;UBERON:0005153!7.55e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0005181;4.06e-10;35!UBERON:0000161;5.79e-10;19!UBERON:0000166;5.79e-10;19!UBERON:0005178;7.51e-10;34!UBERON:0002224;7.51e-10;34!UBERON:0000165;8.35e-10;28!UBERON:0001041;4.62e-08;14!UBERON:0004807;1.33e-07;22!UBERON:0001004;2.11e-07;65!UBERON:0005911;2.59e-07;36!UBERON:0000486;2.81e-07;12!UBERON:0001044;3.29e-07;6!UBERON:0003293;3.29e-07;6!UBERON:0003294;3.29e-07;6!UBERON:0010047;3.29e-07;6!UBERON:0003408;3.29e-07;6!UBERON:0000167;3.29e-07;6!UBERON:0000974;3.76e-07;6!UBERON:0000365;6.12e-07;5!UBERON:0002048;7.49e-07;22!UBERON:0000117;7.49e-07;22!UBERON:0000171;7.49e-07;22!UBERON:0000170;7.49e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.22e-18,74;UBERON:0004119,5.68e-17,160;UBERON:0000925,5.68e-17,160;UBERON:0006595,5.68e-17,160;UBERON:0000161,1.25e-12,36;UBERON:0000065,4.68e-12,54;UBERON:0005181,1.59e-11,35;UBERON:0003102,1.87e-11,99;UBERON:0000166,5.42e-11,22;UBERON:0005178,5.94e-11,34;UBERON:0002224,5.94e-11,34;UBERON:0001007,1.87e-10,145;UBERON:0001555,1.87e-10,145;UBERON:0007026,1.87e-10,145;UBERON:0004921,2.68e-10,118;UBERON:0005631,1.01e-09,14;UBERON:0000158,1.01e-09,14;UBERON:0000153,1.54e-09,62;UBERON:0007811,1.54e-09,62;UBERON:0000165,2.93e-09,29;UBERON:0000930,2.93e-09,29;UBERON:0001041,3.73e-09,87;UBERON:0005153,4.26e-09,37;UBERON:0005157,1.85e-08,47;UBERON:0004807,5.75e-08,28;UBERON:0000033,6.08e-08,56;UBERON:0000072,7.90e-08,47;UBERON:0003124,2.74e-07,7;UBERON:0002050,2.97e-07,564;UBERON:0004175,3.06e-07,25;UBERON:0001044,3.30e-07,6;UBERON:0003293,3.30e-07,6;UBERON:0003294,3.30e-07,6;UBERON:0010047,3.30e-07,6;UBERON:0000167,3.30e-07,6;UBERON:0000365,6.13e-07,5;UBERON:0005423,7.10e-07,581;UBERON:0004923,7.36e-07,66;UBERON:0002048,7.89e-07,22;UBERON:0000117,7.89e-07,22;UBERON:0000171,7.89e-07,22;UBERON:0000170,7.89e-07,22;UBERON:0005597,7.89e-07,22;UBERON:0000118,7.89e-07,22;UBERON:0000922,8.47e-07,592;UBERON:0003408,9.99e-07,10 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,13.0592814099919,1.47440361900905,14.653824527421,1247.30023486328,1752.20403637162,0,0,0,0,0,0,0,0.816002764977012,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,1.15148819429164,23.8416829906757,16099.9850618505,16440.7226646732,8354.96161372873,0,0,0,0.553995408531877,0,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0.512321413058201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,95.0477219134389,0.368277635987565,0,0.422510572623884,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,1.04535523804977,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,3.76600949298142,0,20.4386645527107,0,0,3.86473057049755,17.7476647299401,32121.3727499066,30514.818072273,0,0,0.132957960518865,184.114761963724,209.922132256307,58.3188277087417,0,4.30117297553062,0,0,0,0,0.208994966536811,0,0,0,0,0,15.3759096255347,0,0,0,0,0.450445921933289,0,0,0.732806975721629,0,0,29324.2723482204,0,0,0,0,43.9788793925963,82.9802848210615,0,0.49333509683432,0,0,0.490385709340376,0,0,0,0,467.216421844904,1.79338416662161,0.587172493218824,4.69431538667581,4.21352420106745,0,0,0,0,0,0,0.718618141816238,0,0.250237039743928,0,0,0.30648779579902,1.35214253015937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6827.71268140611,7621.89033991087,6805.58624398567,0,0,0,0.621966330092223,0,0,0,0,2.76269842704961,0,0,0,0,0,0,0,0.237270619111097,0.269662616320329,0,0,0,0,0.8231480226628,1.47008711385542,0,0,1.18157981336281,0,0.614942192715568,0,30781.2235474156,29088.4497255394,17794.5328776104,17884.1063014861,0,0,0,0,0,0,0,0,0,0,0,0,0,9199.97580580216,5576.67069194574,6913.80439212222,6633.68933512268,8920.13684087052,17255.2876238678,0,0,6.01251535068239,7.78247748451592,5.6809095041871,19.176364076235,0,0,439.656186278352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08189248444927,0,0,0,0,0,0,0,0,23.5080144898048,0,0,0,0,0,0,0,134.514992680256,0,14.0120568091694,0,0,0,1.03384013061444,1.2942852049117,1.70764092485511,10802.8603912018,2271.84374931829,2970.98463196411,0,0,0,0,0,0,1.48418066444991,0,0.177561725313127,0,0,0,1.0877350463246,5199.53378790478,5626.05634299433,0,0,43.6644301814882,0,0,0,0,0,0,0.170093705276516,5.61381381865562,0,0,0,0,0,0.223874754722178,0,0,0,0,0,2.67906630284078,0,0,9729.78101026915,12865.9923895548,0,0,0,0,0,0,0,7.07381007553637,0.0890320356467374,5466.63329064899,3609.71384525142,3750.66523292832,4335.21785634545,0,0,0,0.616067160352178,0,0,0,0,0,0,0,2.55897791311334,0,0,0,0,0,1.64937363283961,0,0,0,0,0,0,0,0,4.52032466480971,0,0,0,0,0,0,58.5566411408528,0,0,0,0,0,2.11107635297664,0,0,0,12576.6150216753,14255.9887960951,11641.535191524,3.29503302718727,8749.1606887974,11410.5730469683,15042.0376682711,3142.84583823141,1.01489521846434,0.764637207142375,0,0.476463550915578,0.411362273086194,0,0.540031437238115,0,0,1.92495971052672,2607.47293825416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3065.47918403194,177.287914457085,3046.72700412228,0,0.140669416410513,0,0,730.071661306601,50.6089890157717,4.42054264849836,0,0,3.81562896929315,0,0.359473404589307,0,0,25.6472854656027,0,0,0,0.185536196323703,0,0,0.174919999992391,144.999915086959,1067.2687514697,0,1.18193840883968,0,0,0,0,0,0,0,0,0.658156191461918,0,10731.8638683569,1120.31881355678,0,0,0,0,536.240949509357,3.20591576906518,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,2.12298154808014,0,0,0,0,2.42644078730437,11.236087062183,0.702793337176017,0.182454789215666,432.61447245885,0,86.8085686268659,1.20990716048664,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,1.66409607615766,0,2315.65834329916,2138.87058726733,95.0513075236644,0,0,0,0.0821154570532092,6514.36428146118,0,362.473108211974,0,0,0.189932387867636,0,0.400794101257669,0,166.04178556275,1.58499458869517,0.114536596165916,0,0,0,830.821472024204,1.08723364858891,0.313808538937,0,0,0,0,0,0,0,0,0,0,7.98716001995964,1.71690419254628,0.223171457441873,6.24806294126554,0,0,0,0.0824158583811665,0,0,0,0,0.408610218334727,0,0,0,14.398329059296,306.425574004948,0.182248669974074,6013.00220990444,0.945668487590378,1.67854682031994,0,0,62.5643543261392,1.42939065274673,0,0,0,4.32110745600634,0,0,0,0,0,0.293104467356165,0,0,0,0,19.0300056025501,17.7267104862373,5.81655928868764,14.4983669371518,0,0.395223263795889,0,2943.39153957831,0,0,0,0,0,0.886068179966986,0.122026264901963,0,34.4045517414043,1.33114861844223,2.54595252059672,0,302.827528492184,0,0,0,0,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28883182749851,0,0.226705925512272,0,0,0,3163.67082616416,36.1818681804867,0,52.2797043714179,0,0,0,0,0,1.55888247071511,3.18875616752071,2.28991551958182,0,0,0.422624246717254,0,0,0,0,0,3490.97287415418,7339.26751386901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,1.23069818544453,0,0.553258019713743,1.453280810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| ||
|short_description=p1@KRT5 | |||
}} | }} |
Latest revision as of 23:53, 18 September 2015
Short description: | p1@KRT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT5_5end |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | 0bp_to_ENST00000456000, ENST00000551275, ENST00000552629_5end |
EntrezGene: | KRT5 |
HGNC: | 6442 |
UniProt: | E7EU87F8VU69 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.15e-21 | 42 |
endodermal cell | 4.86e-14 | 58 |
epithelial cell of alimentary canal | 6.87e-11 | 20 |
epithelial cell | 8.35e-11 | 253 |
respiratory epithelial cell | 1.86e-10 | 13 |
general ecto-epithelial cell | 7.68e-10 | 14 |
acinar cell | 3.65e-07 | 5 |
squamous epithelial cell | 6.22e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.75e-12 | 14 |