FFCP PHASE1:Hg19::chr15:73976625..73976634,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80381 | |EntrezGene=80381 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19137 | |HGNC=19137 | ||
|TSSclassifier=strong | |||
|UniProt=Q5ZPR3,A8K9J6 | |UniProt=Q5ZPR3,A8K9J6 | ||
|association_with_transcript=3bp_to_ENST00000560786,NM_001024736,NM_025240,uc002avu.1,uc002avv.1,uc002avw.1,uc010bjd.1,uc010ulb.1_5end | |association_with_transcript=3bp_to_ENST00000560786,NM_001024736,NM_025240,uc002avu.1,uc002avv.1,uc002avw.1,uc010bjd.1,uc010ulb.1_5end | ||
|cluster_id=chr15:73976625..73976634,+ | |||
|description=CAGE_peak_4_at_CD276_5end | |description=CAGE_peak_4_at_CD276_5end | ||
|id=chr15:73976625..73976634,+ | |id=chr15:73976625..73976634,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.10e-21!180;CL:0000222!1.95e-13!119;CL:0002321!3.47e-13!248;CL:0000548!4.57e-13!679;CL:0000004!4.57e-13!679;CL:0000255!4.57e-13!679;CL:0000057!5.42e-13!75;CL:0000220!9.71e-13!246;CL:0000012!2.39e-12!682;CL:0000144!7.92e-09!625;CL:0000183!3.92e-08!59;CL:0000066!1.66e-07!254;CL:0002371!1.80e-07!591;CL:0000680!4.15e-07!57;CL:0000056!4.15e-07!57;CL:0000355!4.15e-07!57;CL:0000003!6.67e-07!722 | |ontology_enrichment_celltype=CL:0000055!3.10e-21!180;CL:0000222!1.95e-13!119;CL:0002321!3.47e-13!248;CL:0000548!4.57e-13!679;CL:0000004!4.57e-13!679;CL:0000255!4.57e-13!679;CL:0000057!5.42e-13!75;CL:0000220!9.71e-13!246;CL:0000012!2.39e-12!682;CL:0000144!7.92e-09!625;CL:0000183!3.92e-08!59;CL:0000066!1.66e-07!254;CL:0002371!1.80e-07!591;CL:0000680!4.15e-07!57;CL:0000056!4.15e-07!57;CL:0000355!4.15e-07!57;CL:0000003!6.67e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:1000497;4.50e-09;17!CL:0002518;4.50e-09;17!CL:1000449;6.89e-09;15!CL:0002681;8.46e-08;12!CL:0002584;8.46e-08;12!CL:1000507;4.97e-07;10!CL:1000494;4.97e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.54e-09,17;CL:0002518,1.54e-09,17;CL:1000449,2.25e-09,15;CL:0002681,4.48e-08,12;CL:0002584,4.48e-08,12;CL:1000507,1.99e-07,10;CL:1000494,1.99e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!3.44e-12!216;UBERON:0003914!3.99e-12!118;UBERON:0000475!9.60e-12!365;UBERON:0000468!2.44e-11!659;UBERON:0005256!5.07e-11!143;UBERON:0002049!9.58e-11!79;UBERON:0007798!9.58e-11!79;UBERON:0000119!1.15e-08!312;UBERON:0000483!1.15e-08!309;UBERON:0000490!4.23e-08!138;UBERON:0000467!6.56e-08!625;UBERON:0004872!7.00e-08!84;UBERON:0000480!9.93e-08!626;UBERON:0001637!1.05e-07!42;UBERON:0003509!1.05e-07!42;UBERON:0004572!1.05e-07!42;UBERON:0000055!2.10e-07!69;UBERON:0004535!2.48e-07!110;UBERON:0003104!3.20e-07!238;UBERON:0009142!3.20e-07!238;UBERON:0000481!7.01e-07!347;UBERON:0000914!9.38e-07!83;UBERON:0002329!9.38e-07!83;UBERON:0003077!9.38e-07!83;UBERON:0003059!9.38e-07!83;UBERON:0007282!9.38e-07!83;UBERON:0009618!9.38e-07!83;UBERON:0007285!9.38e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;3.12e-09;15!UBERON:0006555;6.89e-09;15!UBERON:0004819;6.89e-09;15!UBERON:0001285;6.89e-09;15!UBERON:0007684;6.89e-09;15!UBERON:0001225;8.46e-08;12!UBERON:0008987;8.46e-08;12!UBERON:0001851;2.78e-07;15!UBERON:0004211;4.97e-07;10!UBERON:0009773;4.97e-07;10!UBERON:0001231;4.97e-07;10!UBERON:0004810;4.97e-07;10!UBERON:0007625;5.40e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.90e-09,117;UBERON:0004211,2.25e-09,15;UBERON:0009773,2.25e-09,15;UBERON:0001231,2.25e-09,15;UBERON:0001285,2.25e-09,15;UBERON:0007684,2.25e-09,15;UBERON:0004208,2.25e-09,15;UBERON:0000353,2.84e-09,15;UBERON:0006555,1.28e-08,16;UBERON:0004819,1.28e-08,16;UBERON:0001225,4.48e-08,12;UBERON:0008987,4.48e-08,12;UBERON:0001851,1.96e-07,15;UBERON:0004810,1.99e-07,10;UBERON:0007625,3.27e-07,11 | |||
|phase1_expression=0.908391896352783,1.71280419112787,0.140954404095971,1.0007329835313,0.893922188854576,0,0,1.89515962028049,1.56711376919903,1.22866968250754,5.58240934377942,0.436882744260345,0.263766978228454,0.866364470720326,0.994192127183747,1.34465029290355,0.602694528023977,1.46062018077475,0.487932798790507,1.23121058076788,0.408001382488506,0.626909442956176,1.71741592278634,1.09499540058307,1.25542639594803,0,0,0.0787107813136792,0,0,0,0,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.511450247374121,0.361439152384566,2.50668955317945,1.30361867064741,0,0.486634870302636,1.32348744029695,1.10864698731282,0.702678285545008,0.196468613246569,0.728590576585084,0.370784442784429,0.324547393654683,0.870648686496336,2.6591592103773,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,0.56530794192401,1.25849830862972,0.275118041940067,0.626984899610432,0.775250277507987,1.42306505074684,0.66944122552934,1.61131726843659,0,0.732186172644509,1.10298924103761,2.43042584364528,0.17859945656816,0.22452937262617,0.337834441449967,0,1.89853131913626,0.732806975721629,0,0,0,0,0.633152558322899,0.926864265692532,1.14734648299525,2.12801029319014,0.560677600142307,1.06748995729705,2.71334303258876,1.24484414159907,0.67355336034844,0.490385709340376,0.908144565869588,1.15235184896,0,0.936480230490962,0.570471821544449,0.896692083310806,0.704606991862589,0.161872944368132,0.421352420106746,0.408308342509787,0.491337269247072,0.929932030581889,1.18800285728205,0.989067717114227,0,3.59309070908119,0.168336113954066,0.750711119231785,0.277064115484183,1.75591048352335,0.30648779579902,1.35214253015937,0.907457465280168,0.717558542755448,0.640672166455702,0.847727604638247,3.00091096084402,0.618315175430633,0,0.18611685633159,1.5189869901714,0.292311015483596,0.252433774244115,0.736399189138395,0.80823028409406,1.77504796258307,0.806016785821122,1.3564847384839,0.386521706326594,1.36373060295417,0,0.975789649036763,0.795178609928912,0.464775771478074,0.518305275076852,1.51392510525377,0.36497735907583,1.56449532329816,0,0,0,0,0.354920400119532,0.505754070234305,0.964044119533928,0,0.217879444092406,0.71181185733329,0.134831308160164,1.17732879075208,0,0.738155454624648,5.60967095213783,1.6462960453256,1.47008711385542,0,0,0,0,0.368965315629341,1.88724591328378,0.439001141634502,0,0.402115889646523,0,0.325808305310325,1.03993478527958,2.88662684050547,1.39116485970092,0.70445216541493,0.721832238805369,0.925971025153221,0.570762456703795,0.790204397959275,3.43394464837949,0.246217006087397,2.10603838625314,0.743155811443641,0,1.51183915378974,0.567100388969546,0.179117045405697,0,1.15014803749563,0.492663237895943,0.44024217006613,0.207328115540772,0.432359860250884,0.25248486685276,0.317489471460845,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0.672786506072164,0,0.51336800074665,0.904902010304444,7.15312891703765,2.535908257668,0.26593811658487,0,1.80045161983499,0,0.532844358032199,0.57191197463259,0.542621605391443,0,1.30294473717494,0.355391948742546,0,0.904318131178758,2.61460037580088,1.59956785891291,1.2162378064119,1.00451418286425,0,0.718874566474748,3.44585807502342,0,0.289562613335158,1.2328579353023,0.716243852959582,0,0,0,0,2.28685161800217,1.30139853857622,0,0.502548796003046,0,0,0,0,1.10422342547226,0,0.542530047399471,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,2.10662269809403,0,1.03473071292505,1.32845119707087,0.737476674166813,0.521301686808497,1.17480694477644,0.686286847621712,0,0,0,0.303127571446259,1.66435439510497,1.5119514666484,0.496215615637554,0.61384789315225,0.561320188866147,0.640695746278505,0.511707249066704,1.12597744800525,5.93672265779964,1.23367755042124,1.06537035187876,1.06765302817952,1.03850885836724,0.581051892299796,0.604297247958111,1.80455823272956,0.368323955743585,0.574072240823034,1.27463817604702,1.18011973463482,1.80479845162965,0.924184045252977,1.56869953835371,0,1.37217117560738,2.27466768141793,0.510281115829547,0.431831832204279,1.54227252690289,2.16757150035082,6.52196706011309,0.509752546090077,3.3243040357149,2.0148727924996,0,0,0.512900250232778,1.31205858279882,1.30151357865721,0.412164046590889,0.183138929636687,0.247528499761764,1.72279661398852,1.30012049207304,0,0.676695028044854,0.462145851343933,0.460511024178389,0.137836572484531,0.537101224341368,0.870100163485371,0.596586391912706,0.890320356467374,0.661139661443912,0.384380134730212,0.382838137483752,0.2023155617111,0,0.62962469366128,0,0.924100740528266,1.06461206063404,0.869932992075073,1.29726953372744,0.715624433709956,0.744316738719335,0.316379424718726,1.14378116354295,1.27948895655667,0,0.318203247925937,0.78494864019923,0.359744915166629,1.09814811894422,0.824686816419805,1.01091240786658,0,0.4212584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|phase1_expression=0.908391896352783,1.71280419112787,0.140954404095971,1.0007329835313,0.893922188854576,0,0,1.89515962028049,1.56711376919903,1.22866968250754,5.58240934377942,0.436882744260345,0.263766978228454,0.866364470720326,0.994192127183747,1.34465029290355,0.602694528023977,1.46062018077475,0.487932798790507,1.23121058076788,0.408001382488506,0.626909442956176,1.71741592278634,1.09499540058307,1.25542639594803,0,0,0.0787107813136792,0,0,0,0,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.511450247374121,0.361439152384566,2.50668955317945,1.30361867064741,0,0.486634870302636,1.32348744029695,1.10864698731282,0.702678285545008,0.196468613246569,0.728590576585084,0.370784442784429,0.324547393654683,0.870648686496336,2.6591592103773,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,0.56530794192401,1.25849830862972,0.275118041940067,0.626984899610432,0.775250277507987,1.42306505074684,0.66944122552934,1.61131726843659,0,0.732186172644509,1.10298924103761,2.43042584364528,0.17859945656816,0.22452937262617,0.337834441449967,0,1.89853131913626,0.732806975721629,0,0,0,0,0.633152558322899,0.926864265692532,1.14734648299525,2.12801029319014,0.560677600142307,1.06748995729705,2.71334303258876,1.24484414159907,0.67355336034844,0.490385709340376,0.908144565869588,1.15235184896,0,0.936480230490962,0.570471821544449,0.896692083310806,0.704606991862589,0.161872944368132,0.421352420106746,0.408308342509787,0.491337269247072,0.929932030581889,1.18800285728205,0.989067717114227,0,3.59309070908119,0.168336113954066,0.750711119231785,0.277064115484183,1.75591048352335,0.30648779579902,1.35214253015937,0.907457465280168,0.717558542755448,0.640672166455702,0.847727604638247,3.00091096084402,0.618315175430633,0,0.18611685633159,1.5189869901714,0.292311015483596,0.252433774244115,0.736399189138395,0.80823028409406,1.77504796258307,0.806016785821122,1.3564847384839,0.386521706326594,1.36373060295417,0,0.975789649036763,0.795178609928912,0.464775771478074,0.518305275076852,1.51392510525377,0.36497735907583,1.56449532329816,0,0,0,0,0.354920400119532,0.505754070234305,0.964044119533928,0,0.217879444092406,0.71181185733329,0.134831308160164,1.17732879075208,0,0.738155454624648,5.60967095213783,1.6462960453256,1.47008711385542,0,0,0,0,0.368965315629341,1.88724591328378,0.439001141634502,0,0.402115889646523,0,0.325808305310325,1.03993478527958,2.88662684050547,1.39116485970092,0.70445216541493,0.721832238805369,0.925971025153221,0.570762456703795,0.790204397959275,3.43394464837949,0.246217006087397,2.10603838625314,0.743155811443641,0,1.51183915378974,0.567100388969546,0.179117045405697,0,1.15014803749563,0.492663237895943,0.44024217006613,0.207328115540772,0.432359860250884,0.25248486685276,0.317489471460845,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0.672786506072164,0,0.51336800074665,0.904902010304444,7.15312891703765,2.535908257668,0.26593811658487,0,1.80045161983499,0,0.532844358032199,0.57191197463259,0.542621605391443,0,1.30294473717494,0.355391948742546,0,0.904318131178758,2.61460037580088,1.59956785891291,1.2162378064119,1.00451418286425,0,0.718874566474748,3.44585807502342,0,0.289562613335158,1.2328579353023,0.716243852959582,0,0,0,0,2.28685161800217,1.30139853857622,0,0.502548796003046,0,0,0,0,1.10422342547226,0,0.542530047399471,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,2.10662269809403,0,1.03473071292505,1.32845119707087,0.737476674166813,0.521301686808497,1.17480694477644,0.686286847621712,0,0,0,0.303127571446259,1.66435439510497,1.5119514666484,0.496215615637554,0.61384789315225,0.561320188866147,0.640695746278505,0.511707249066704,1.12597744800525,5.93672265779964,1.23367755042124,1.06537035187876,1.06765302817952,1.03850885836724,0.581051892299796,0.604297247958111,1.80455823272956,0.368323955743585,0.574072240823034,1.27463817604702,1.18011973463482,1.80479845162965,0.924184045252977,1.56869953835371,0,1.37217117560738,2.27466768141793,0.510281115829547,0.431831832204279,1.54227252690289,2.16757150035082,6.52196706011309,0.509752546090077,3.3243040357149,2.0148727924996,0,0,0.512900250232778,1.31205858279882,1.30151357865721,0.412164046590889,0.183138929636687,0.247528499761764,1.72279661398852,1.30012049207304,0,0.676695028044854,0.462145851343933,0.460511024178389,0.137836572484531,0.537101224341368,0.870100163485371,0.596586391912706,0.890320356467374,0.661139661443912,0.384380134730212,0.382838137483752,0.2023155617111,0,0.62962469366128,0,0.924100740528266,1.06461206063404,0.869932992075073,1.29726953372744,0.715624433709956,0.744316738719335,0.316379424718726,1.14378116354295,1.27948895655667,0,0.318203247925937,0.78494864019923,0.359744915166629,1.09814811894422,0.824686816419805,1.01091240786658,0,0.4212584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| ||
|short_description=p4@CD276 | |short_description=p4@CD276 | ||
}} | }} |
Latest revision as of 23:43, 18 September 2015
Short description: | p4@CD276 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CD276_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENST00000560786, NM_001024736, NM_025240, uc002avu.1, uc002avv.1, uc002avw.1, uc010bjd.1, uc010ulb.1_5end |
EntrezGene: | CD276 |
HGNC: | 19137 |
UniProt: | Q5ZPR3A8K9J6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.54e-09 | 17 |
kidney epithelial cell | 1.54e-09 | 17 |
epithelial cell of nephron | 2.25e-09 | 15 |
kidney cortical cell | 4.48e-08 | 12 |
renal cortical epithelial cell | 4.48e-08 | 12 |
kidney tubule cell | 1.99e-07 | 10 |
nephron tubule epithelial cell | 1.99e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.90e-09 | 117 |
nephron epithelium | 2.25e-09 | 15 |
renal tubule | 2.25e-09 | 15 |
nephron tubule | 2.25e-09 | 15 |
nephron | 2.25e-09 | 15 |
uriniferous tubule | 2.25e-09 | 15 |
nephrogenic mesenchyme | 2.25e-09 | 15 |
parenchyma | 2.84e-09 | 15 |
excretory tube | 1.28e-08 | 16 |
kidney epithelium | 1.28e-08 | 16 |
cortex of kidney | 4.48e-08 | 12 |
renal parenchyma | 4.48e-08 | 12 |
cortex | 1.96e-07 | 15 |
nephron tubule epithelium | 1.99e-07 | 10 |
pigment epithelium of eye | 3.27e-07 | 11 |