FFCP PHASE1:Hg19::chrX:107334895..107334914,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115201 | |EntrezGene=115201 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16489 | |HGNC=16489 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WYN0 | |UniProt=Q8WYN0 | ||
|association_with_transcript=0bp_to_ENST00000345734,ENST00000372232,NM_052936,NM_178270_5end | |association_with_transcript=0bp_to_ENST00000345734,ENST00000372232,NM_052936,NM_178270_5end | ||
|cluster_id=chrX:107334895..107334914,+ | |||
|description=CAGE_peak_3_at_ATG4A_5end | |description=CAGE_peak_3_at_ATG4A_5end | ||
|id=chrX:107334895..107334914,+ | |id=chrX:107334895..107334914,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;6.46e-13;2!CL:0000558;6.46e-13;2!CL:0002595;7.63e-11;5!CL:0002618;3.97e-09;3!CL:0002521;1.49e-08;3!CL:0002139;2.58e-08;24!CL:0000071;4.60e-08;18!CL:0000359;1.05e-07;32!CL:0000511;4.97e-07;1!CL:0002625;4.97e-07;1!CL:0002557;4.97e-07;1!CL:0000216;4.97e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.93e-13,2;CL:0000765,3.93e-13,2;CL:0000050,3.93e-13,2;CL:0000038,3.93e-13,2;CL:0000558,3.93e-13,2;CL:0000547,3.93e-13,2;CL:0000549,3.93e-13,2;CL:0000550,3.93e-13,2;CL:0000552,3.93e-13,2;CL:0002595,7.80e-11,5;CL:0002618,3.84e-09,3;CL:0000222,6.65e-09,121;CL:0002521,1.39e-08,3;CL:0002139,3.08e-08,24;CL:0000071,4.59e-08,18;CL:0002546,4.59e-08,18;CL:0000359,6.40e-08,32;CL:0000511,2.52e-07,1;CL:0002625,2.52e-07,1;CL:0000216,2.52e-07,1;CL:0002557,2.67e-07,1;CL:0000213,9.85e-07,58;CL:0000215,9.85e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;4.60e-08;18!UBERON:0005425;4.97e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!5.41e-07!42;UBERON:0003509!5.41e-07!42;UBERON:0004572!5.41e-07!42 | |ontology_enrichment_uberon=UBERON:0001637!5.41e-07!42;UBERON:0003509!5.41e-07!42;UBERON:0004572!5.41e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.47e-12;42!UBERON:0003509;1.47e-12;42!UBERON:0004572;1.47e-12;42!UBERON:0003834;7.63e-11;5!UBERON:0001533;7.63e-11;5!UBERON:0004573;1.35e-10;33!UBERON:0004571;1.35e-10;33!UBERON:0000487;3.99e-09;22!UBERON:0002190;1.49e-08;3!UBERON:0004638;4.60e-08;18!UBERON:0001986;4.60e-08;18!UBERON:0004852;4.60e-08;18!UBERON:0006914;5.86e-08;25!UBERON:0003513;7.05e-08;7!UBERON:0007500;2.84e-07;56!UBERON:0001981;2.84e-07;56!UBERON:0004537;2.84e-07;56!UBERON:0001136;4.97e-07;1!UBERON:0000941;4.97e-07;1!UBERON:0001343;4.97e-07;1!UBERON:0001785;4.97e-07;1!UBERON:0002464;4.97e-07;1!UBERON:0004904;4.97e-07;1!UBERON:0001021;4.97e-07;1!UBERON:0004910;4.97e-07;1!UBERON:0004813;4.97e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.60e-14,42;UBERON:0003509,1.60e-14,42;UBERON:0004572,1.60e-14,42;UBERON:0007500,5.26e-14,59;UBERON:0001981,5.26e-14,59;UBERON:0004537,5.26e-14,59;UBERON:0006965,5.26e-14,59;UBERON:0000055,9.45e-14,68;UBERON:0004872,1.45e-12,83;UBERON:0004573,1.49e-12,33;UBERON:0004571,1.49e-12,33;UBERON:0002049,1.27e-11,78;UBERON:0007798,1.27e-11,78;UBERON:0003834,7.80e-11,5;UBERON:0001533,7.80e-11,5;UBERON:0000487,3.36e-09,22;UBERON:0004535,9.19e-09,109;UBERON:0002190,1.39e-08,3;UBERON:0001009,1.90e-08,112;UBERON:0004638,4.59e-08,18;UBERON:0001986,4.59e-08,18;UBERON:0004852,4.59e-08,18;UBERON:0006914,5.04e-08,25;UBERON:0003513,7.16e-08,7;UBERON:0001136,2.52e-07,1;UBERON:0001343,2.52e-07,1;UBERON:0004910,2.52e-07,1;UBERON:0005154,2.52e-07,1;UBERON:0005295,2.52e-07,1;UBERON:0004813,2.52e-07,1;UBERON:0005297,2.52e-07,1;UBERON:0005294,2.52e-07,1;UBERON:0010141,2.52e-07,1;UBERON:0005891,2.52e-07,1;UBERON:0000941,3.60e-07,1;UBERON:0001785,3.60e-07,1;UBERON:0002464,3.60e-07,1;UBERON:0004904,3.60e-07,1;UBERON:0001021,3.60e-07,1;UBERON:0003902,3.60e-07,1;UBERON:0005425,3.60e-07,1;UBERON:0003914,7.62e-07,117 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,1.26343974685366,1.30592814099919,0,0,0,0,0,0,2.01697543935533,1.20538905604795,0,0,0.123121058076788,0,0,1.43117993565528,0.136874425072884,0.376627918784408,0.152826811495903,0.0821005894499457,0.157421562627358,0,0,0.154816123316076,0,0,0,0.232401601740905,0.568676929949686,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.464858073811369,0,0.309706370895104,0.28769239232215,0,0.47296445977717,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0,0.393419540227666,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0.339928028092699,0,0,0.253019692019503,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0.722878304769133,0,0,0,0,0.378139268656271,0,0.351339142772504,0.589405839739707,0,0,0,0,0.132957960518865,0,0.571994910780128,0.74291500265913,0.39752481473341,1.72046919021225,1.04142150482278,0,0,2.20094433552054,0.417989933073621,1.03366703667732,0.71153252537342,0,0,0,0,0,0,2.41109266367015,0.898117490504679,2.47745257063309,0,0,0.916008719652036,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0.622422070799533,0.269421344139376,1.14423332179421,0,0,0,0,0.570471821544449,0,0.23486899728753,0.485618833104395,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0,0.150238058906597,1.58805056424029,0.179389635688862,0.213557388818567,0,0.300091096084402,0,0.257640540045629,0,0.337552664482532,0.194874010322397,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0.773043412653187,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.709840800239063,0.505754070234305,0,0.441175890929576,0,0.474541238222193,0.134831308160164,0.588664395376038,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.329250856225877,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0.433099343283221,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0.702012795417713,0,0.93733833986777,0.671928512795438,0.850650583454319,0.179117045405697,0,0,0,0.088048434013226,0.207328115540772,0.288239906833923,0.50496973370552,0.063497894292169,0,0,0,0,0,0.571652865261156,0.112131084345361,0,0.07333828582095,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,1.50719688529793,2.61460037580088,0.899756920638513,0,0,0,0,0,0,0.434343920002738,0,0,0,0.394061520403854,0.431255149719035,0.385029108839245,0,0,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0.215714200818617,0,0.303127571446259,0,0,0,0.306923946576125,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0.308419387605311,0,0.328508624055237,1.03850885836724,0,0.120859449591622,0.40101294060657,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.680374821106063,0,0,0,0,0,0,0,3.06963827304308,1.5686127061494,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0,0,0.650060246036521,1.6068392984416,0.096670718292122,0,0,0,0,0,0.255679882248303,0.0890320356467374,0.165284915360978,0,0.127612712494584,0,0.464845549297286,0,0.6970372701606,0,1.06461206063404,0,0.74129687641568,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0,0.606547444719948,1.58510321173008,0,0,0.731140468893853,1.05650146756755,0.136499911407986,0.141405431953713,0,0,1.32687795048244,1.31535265576129,0,0,0.811641507850816,0.30982349809975,0.563391205064483,0.286822704408103,0,0.7133421029625,0.354761064070598,0.211107635297664,0,0,0,0.192444225451024,0,0,0.282431402330337,0,0,0,0,0,0.764637207142375,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0,0,0.711418433484141,1.27541018183058,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0.671028323677248,0.166849141711909,0.19538809540204,0.556812347790485,1.23087398947712,0,0,0,0,0,0,0.111443384277478,0,0.47748896947538,0,0,0,0,0,0.824019371133798,0,0.398495976502139,0,0.251932747854276,0.306806047506464,1.23084805461069,0,0.179736702294654,0.716084698702437,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0.885741385813839,0,0,0.110579259931225,0,0.438770794307945,0.10893846351899,0.697118721393016,0.230850775511391,0,0,0,0,0.957003479195758,0.0915975934018623,0,0,0,0,0,0.588187602953219,0,0.189753732724185,0.158936578980379,0,0.163232808159148,0.141353071433941,0,0,0,0.611030144933625,0.593042257361244,0.370691816839509,0.208843899010911,0.269604531922708,0,0,0,0.19566461893209,0.485560759068186,0.394584402849391,0,0,0.126373159256976,1.05226393590145,0.414752765588989,0,0,0,0,0,0.554698692052555,0.173559738335131,0.195984794828755,0.34823682632161,0.17472666824203,0.343972064943233,0.2902689938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| 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| ||
|short_description=p3@ATG4A | |short_description=p3@ATG4A | ||
}} | }} |
Latest revision as of 23:18, 18 September 2015
Short description: | p3@ATG4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATG4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000345734, ENST00000372232, NM_052936, NM_178270_5end |
EntrezGene: | ATG4A |
HGNC: | 16489 |
UniProt: | Q8WYN0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.93e-13 | 2 |
erythroblast | 3.93e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 3.93e-13 | 2 |
erythroid progenitor cell | 3.93e-13 | 2 |
reticulocyte | 3.93e-13 | 2 |
proerythroblast | 3.93e-13 | 2 |
basophilic erythroblast | 3.93e-13 | 2 |
polychromatophilic erythroblast | 3.93e-13 | 2 |
orthochromatic erythroblast | 3.93e-13 | 2 |
smooth muscle cell of the subclavian artery | 7.80e-11 | 5 |
endothelial cell of umbilical vein | 3.84e-09 | 3 |
mesodermal cell | 6.65e-09 | 121 |
subcutaneous fat cell | 1.39e-08 | 3 |
endothelial cell of vascular tree | 3.08e-08 | 24 |
blood vessel endothelial cell | 4.59e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.59e-08 | 18 |
vascular associated smooth muscle cell | 6.40e-08 | 32 |
androgen binding protein secreting cell | 2.52e-07 | 1 |
seminiferous tubule epithelial cell | 2.52e-07 | 1 |
Sertoli cell | 2.52e-07 | 1 |
fibroblast of pulmonary artery | 2.67e-07 | 1 |
lining cell | 9.85e-07 | 58 |
barrier cell | 9.85e-07 | 58 |